RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 ZKSCAN1P17029 563 aaPredicted RBP33.22■■■□□ 2.91
CCM2-201ENST00000258781 KCNJ4P48050 445 aa33.22■■■□□ 2.91
CCM2-201ENST00000258781 MCMDC2Q4G0Z9 681 aa33.22■■■□□ 2.91
CCM2-201ENST00000258781 STK32BQ9NY57 414 aa33.22■■■□□ 2.91
CCM2-201ENST00000258781 TAF5LO75529 589 aa33.21■■■□□ 2.91
CCM2-201ENST00000258781 PDE8BO95263 885 aa33.21■■■□□ 2.91
CCM2-201ENST00000258781 CUL4AQ13619 759 aa33.21■■■□□ 2.91
CCM2-201ENST00000258781 CREB3L3Q68CJ9 461 aa33.21■■■□□ 2.91
CCM2-201ENST00000258781 CNBD1Q8NA66 436 aa33.2■■■□□ 2.91
CCM2-201ENST00000258781 TTC14Q96N46 770 aa33.2■■■□□ 2.91
CCM2-201ENST00000258781 RNF20Q5VTR2 975 aa33.2■■■□□ 2.9
CCM2-201ENST00000258781 PRR5LQ6MZQ0 368 aa33.2■■■□□ 2.9
CCM2-201ENST00000258781 ZNF512BQ96KM6 892 aaPredicted RBP33.2■■■□□ 2.9
CCM2-201ENST00000258781 HELLSQ9NRZ9 838 aa33.2■■■□□ 2.9
CCM2-201ENST00000258781 POLRMTO00411 1230 aaKnown RBP33.19■■■□□ 2.9
CCM2-201ENST00000258781 SF3B3Q15393 1217 aaKnown RBP33.19■■■□□ 2.9
CCM2-201ENST00000258781 AKAP11Q9UKA4 1901 aa33.19■■■□□ 2.9
CCM2-201ENST00000258781 MYH7P12883 1935 aa33.18■■■□□ 2.9
CCM2-201ENST00000258781 NPHP1O15259 732 aa33.18■■■□□ 2.9
CCM2-201ENST00000258781 SERPINB2P05120 415 aa33.18■■■□□ 2.9
CCM2-201ENST00000258781 MCM4P33991 863 aa33.18■■■□□ 2.9
CCM2-201ENST00000258781 CCDC125Q86Z20 511 aa33.18■■■□□ 2.9
CCM2-201ENST00000258781 HMG20BQ9P0W2 317 aa33.18■■■□□ 2.9
CCM2-201ENST00000258781 LRRFIP1Q32MZ4 808 aaKnown RBP33.18■■■□□ 2.9
CCM2-201ENST00000258781 SLC27A2O14975 620 aa33.17■■■□□ 2.9
CCM2-201ENST00000258781 NLGN1Q8N2Q7 840 aa33.17■■■□□ 2.9
CCM2-201ENST00000258781 TNPO1Q92973 898 aaKnown RBP33.17■■■□□ 2.9
CCM2-201ENST00000258781 INTS4Q96HW7 963 aaKnown RBP33.17■■■□□ 2.9
CCM2-201ENST00000258781 NUCB2P80303 420 aa33.16■■■□□ 2.9
CCM2-201ENST00000258781 PUM3Q15397 648 aaKnown RBP33.16■■■□□ 2.9
CCM2-201ENST00000258781 ZMYM1Q5SVZ6 1142 aa33.16■■■□□ 2.9
CCM2-201ENST00000258781 ZSWIM6Q9HCJ5 1215 aa33.16■■■□□ 2.9
CCM2-201ENST00000258781 NRXN2Q9P2S2 1712 aa33.16■■■□□ 2.9
CCM2-201ENST00000258781 CASTP20810 708 aaKnown RBP33.16■■■□□ 2.9
CCM2-201ENST00000258781 JAKMIP1Q96N16 626 aaKnown RBP33.16■■■□□ 2.9
CCM2-201ENST00000258781 NLRP3Q96P20 1036 aa33.16■■■□□ 2.9
CCM2-201ENST00000258781 RPAP1Q9BWH6 1393 aaPredicted RBP33.15■■■□□ 2.9
CCM2-201ENST00000258781 RNF113AO15541 343 aaKnown RBP33.15■■■□□ 2.9
CCM2-201ENST00000258781 MPHOSPH8Q99549 860 aa33.15■■■□□ 2.9
CCM2-201ENST00000258781 TSGA10IPQ3SY00 556 aa33.14■■■□□ 2.9
CCM2-201ENST00000258781 MSL1Q68DK7 614 aa33.14■■■□□ 2.9
CCM2-201ENST00000258781 U3KPZ7 1027 aaPredicted RBP33.14■■■□□ 2.9
CCM2-201ENST00000258781 FGFR2P21802 821 aa33.14■■■□□ 2.9
CCM2-201ENST00000258781 ZGPATQ8N5A5 531 aaKnown RBP33.14■■■□□ 2.9
CCM2-201ENST00000258781 LPIN2Q92539 896 aa33.14■■■□□ 2.9
CCM2-201ENST00000258781 CYP46A1Q9Y6A2 500 aa33.14■■■□□ 2.9
CCM2-201ENST00000258781 PSMA5P28066 241 aa33.13■■■□□ 2.89
CCM2-201ENST00000258781 IGHMBP2P38935 993 aaKnown RBP33.13■■■□□ 2.89
CCM2-201ENST00000258781 FKBP4Q02790 459 aaKnown RBP eCLIP33.13■■■□□ 2.89
CCM2-201ENST00000258781 VPS53Q5VIR6 699 aa33.13■■■□□ 2.89
CCM2-201ENST00000258781 SEC62Q99442 399 aaKnown RBP33.13■■■□□ 2.89
CCM2-201ENST00000258781 ZFYP08048 801 aaPredicted RBP33.12■■■□□ 2.89
CCM2-201ENST00000258781 ADCK5Q3MIX3 580 aa33.12■■■□□ 2.89
CCM2-201ENST00000258781 GBP4Q96PP9 640 aa33.12■■■□□ 2.89
CCM2-201ENST00000258781 PDGFDQ9GZP0 370 aaPredicted RBP33.12■■■□□ 2.89
CCM2-201ENST00000258781 CHGBP05060 677 aa33.12■■■□□ 2.89
CCM2-201ENST00000258781 AK2P54819 239 aa33.11■■■□□ 2.89
CCM2-201ENST00000258781 SCARF1Q14162 830 aa33.11■■■□□ 2.89
CCM2-201ENST00000258781 RUFY3Q7L099 469 aa33.11■■■□□ 2.89
CCM2-201ENST00000258781 ANKRD31Q8N7Z5 1873 aa33.11■■■□□ 2.89
CCM2-201ENST00000258781 CCDC129Q6ZRS4 1044 aa33.1■■■□□ 2.89
CCM2-201ENST00000258781 DDX11L8A8MPP1 907 aa33.1■■■□□ 2.89
CCM2-201ENST00000258781 CYP2E1P05181 493 aaPredicted RBP33.1■■■□□ 2.89
CCM2-201ENST00000258781 UQCRFS1P1P0C7P4 283 aa33.1■■■□□ 2.89
CCM2-201ENST00000258781 CLEC17AQ6ZS10 378 aa33.1■■■□□ 2.89
CCM2-201ENST00000258781 NOL8Q76FK4 1167 aaKnown RBP33.1■■■□□ 2.89
CCM2-201ENST00000258781 CDC5LQ99459 802 aaKnown RBP33.1■■■□□ 2.89
CCM2-201ENST00000258781 LIMCH1Q9UPQ0 1083 aa33.1■■■□□ 2.89
CCM2-201ENST00000258781 A0A1B0GUL6 1792 aa33.09■■■□□ 2.89
CCM2-201ENST00000258781 MMP10P09238 476 aa33.09■■■□□ 2.89
CCM2-201ENST00000258781 SLC5A1P13866 664 aa33.09■■■□□ 2.89
CCM2-201ENST00000258781 ARID4AP29374 1257 aaPredicted RBP33.09■■■□□ 2.89
CCM2-201ENST00000258781 ZAP70P43403 619 aa33.09■■■□□ 2.89
CCM2-201ENST00000258781 PDRG1Q9NUG6 133 aa33.09■■■□□ 2.89
CCM2-201ENST00000258781 ST5P78524 1137 aa33.08■■■□□ 2.89
CCM2-201ENST00000258781 KRT32Q14532 448 aa33.08■■■□□ 2.89
CCM2-201ENST00000258781 DSCC1Q9BVC3 393 aa33.08■■■□□ 2.89
CCM2-201ENST00000258781 MCAMP43121 646 aa33.08■■■□□ 2.89
CCM2-201ENST00000258781 CELF1Q92879 486 aaKnown RBP33.08■■■□□ 2.89
CCM2-201ENST00000258781 MAST3O60307 1309 aa33.06■■■□□ 2.88
CCM2-201ENST00000258781 CCDC102BQ68D86 513 aa33.06■■■□□ 2.88
CCM2-201ENST00000258781 TTF1Q15361 905 aaPredicted RBP33.05■■■□□ 2.88
CCM2-201ENST00000258781 HELBQ8NG08 1087 aaPredicted RBP33.05■■■□□ 2.88
CCM2-201ENST00000258781 CPA1P15085 419 aa33.05■■■□□ 2.88
CCM2-201ENST00000258781 UPF1Q92900 1129 aaKnown RBP eCLIP33.04■■■□□ 2.88
CCM2-201ENST00000258781 ALDH8A1Q9H2A2 487 aaPredicted RBP33.04■■■□□ 2.88
CCM2-201ENST00000258781 ANKRD18AQ8IVF6 992 aa33.03■■■□□ 2.88
CCM2-201ENST00000258781 ZSCAN31Q96LW9 406 aaPredicted RBP33.03■■■□□ 2.88
CCM2-201ENST00000258781 DDX24Q9GZR7 859 aaKnown RBP eCLIP33.03■■■□□ 2.88
CCM2-201ENST00000258781 PHKA1P46020 1223 aa33.03■■■□□ 2.88
CCM2-201ENST00000258781 BLOC1S2Q6QNY1 142 aa33.03■■■□□ 2.88
CCM2-201ENST00000258781 PTMSP20962 102 aa33.02■■■□□ 2.88
CCM2-201ENST00000258781 SLFNL1Q499Z3 407 aa33.02■■■□□ 2.88
CCM2-201ENST00000258781 CRY2Q49AN0 593 aa33.02■■■□□ 2.88
CCM2-201ENST00000258781 ZSCAN25Q6NSZ9 544 aa33.02■■■□□ 2.88
CCM2-201ENST00000258781 PI16Q6UXB8 463 aa33.02■■■□□ 2.88
CCM2-201ENST00000258781 PARP3Q9Y6F1 533 aa33.02■■■□□ 2.88
CCM2-201ENST00000258781 DEKP35659 375 aaKnown RBP33.01■■■□□ 2.88
CCM2-201ENST00000258781 APPBP2Q92624 585 aa33.01■■■□□ 2.88
CCM2-201ENST00000258781 SH2B1Q9NRF2 756 aaPredicted RBP33.01■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 159.5 ms