RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 HPS3Q969F9 1004 aa8.89□□□□□ -0.99
GPNMB-201ENST00000258733 SPDL1Q96EA4 605 aa8.89□□□□□ -0.99
GPNMB-201ENST00000258733 DDX11Q96FC9 970 aa8.89□□□□□ -0.99
GPNMB-201ENST00000258733 CORO1BQ9BR76 489 aa8.89□□□□□ -0.99
GPNMB-201ENST00000258733 BRD8Q9H0E9 1235 aa8.89□□□□□ -0.99
GPNMB-201ENST00000258733 LRRIQ1Q96JM4 1722 aa8.89□□□□□ -0.99
GPNMB-201ENST00000258733 ANKRD65E5RJM6 399 aa8.89□□□□□ -0.99
GPNMB-201ENST00000258733 CAVIN2O95810 425 aa8.89□□□□□ -0.99
GPNMB-201ENST00000258733 VIL1P09327 827 aaKnown RBP8.89□□□□□ -0.99
GPNMB-201ENST00000258733 RCN1Q15293 331 aa8.89□□□□□ -0.99
GPNMB-201ENST00000258733 FNBP4Q8N3X1 1017 aaPredicted RBP8.89□□□□□ -0.99
GPNMB-201ENST00000258733 RBM33Q96EV2 1170 aaKnown RBP8.89□□□□□ -0.99
GPNMB-201ENST00000258733 FAM107BQ9H098 131 aa8.89□□□□□ -0.99
GPNMB-201ENST00000258733 RPAP3Q9H6T3 665 aaPredicted RBP8.89□□□□□ -0.99
GPNMB-201ENST00000258733 SWAP70Q9UH65 585 aa8.89□□□□□ -0.99
GPNMB-201ENST00000258733 MKRN1Q9UHC7 482 aaKnown RBP8.89□□□□□ -0.99
GPNMB-201ENST00000258733 MYO6Q9UM54 1294 aa8.89□□□□□ -0.99
GPNMB-201ENST00000258733 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.89□□□□□ -0.99
GPNMB-201ENST00000258733 NCOA3Q9Y6Q9 1424 aa8.88□□□□□ -0.99
GPNMB-201ENST00000258733 MSL3P1P0C860 447 aa8.88□□□□□ -0.99
GPNMB-201ENST00000258733 THEMIS2Q5TEJ8 643 aa8.88□□□□□ -0.99
GPNMB-201ENST00000258733 FAM117BQ6P1L5 589 aa8.88□□□□□ -0.99
GPNMB-201ENST00000258733 MFN1Q8IWA4 741 aa8.88□□□□□ -0.99
GPNMB-201ENST00000258733 ANKK1Q8NFD2 765 aa8.88□□□□□ -0.99
GPNMB-201ENST00000258733 ERMNQ8TAM6 284 aa8.88□□□□□ -0.99
GPNMB-201ENST00000258733 SPIRE2Q8WWL2 714 aa8.88□□□□□ -0.99
GPNMB-201ENST00000258733 RUFY1Q96T51 708 aa8.88□□□□□ -0.99
GPNMB-201ENST00000258733 RTEL1Q9NZ71 1219 aa8.88□□□□□ -0.99
GPNMB-201ENST00000258733 WDR37Q9Y2I8 494 aa8.88□□□□□ -0.99
GPNMB-201ENST00000258733 DMRT2Q9Y5R5 561 aa8.88□□□□□ -0.99
GPNMB-201ENST00000258733 KDRP35968 1356 aa8.88□□□□□ -0.99
GPNMB-201ENST00000258733 CHUKO15111 745 aa8.88□□□□□ -0.99
GPNMB-201ENST00000258733 HOXD11P31277 338 aaPredicted RBP8.88□□□□□ -0.99
GPNMB-201ENST00000258733 PDE6BP35913 854 aa8.88□□□□□ -0.99
GPNMB-201ENST00000258733 GUCY1B3Q02153 619 aa8.88□□□□□ -0.99
GPNMB-201ENST00000258733 KCNB1Q14721 858 aa8.88□□□□□ -0.99
GPNMB-201ENST00000258733 PPP2R5BQ15173 497 aa8.88□□□□□ -0.99
GPNMB-201ENST00000258733 LRSAM1Q6UWE0 723 aa8.88□□□□□ -0.99
GPNMB-201ENST00000258733 PLPP6Q8IY26 295 aa8.88□□□□□ -0.99
GPNMB-201ENST00000258733 OR8K1Q8NGG5 319 aa8.88□□□□□ -0.99
GPNMB-201ENST00000258733 DDX12PQ92771 950 aa8.88□□□□□ -0.99
GPNMB-201ENST00000258733 ZKSCAN4Q969J2 545 aaPredicted RBP8.88□□□□□ -0.99
GPNMB-201ENST00000258733 PAGR1Q9BTK6 254 aa8.88□□□□□ -0.99
GPNMB-201ENST00000258733 OSBPL10Q9BXB5 764 aa8.88□□□□□ -0.99
GPNMB-201ENST00000258733 MUC3BQ9H195 1237 aa8.88□□□□□ -0.99
GPNMB-201ENST00000258733 PRKRIP1Q9H875 184 aaPredicted RBP8.88□□□□□ -0.99
GPNMB-201ENST00000258733 GIGYF1O75420 1035 aaPredicted RBP8.87□□□□□ -0.99
GPNMB-201ENST00000258733 EIF2B5Q13144 721 aaKnown RBP8.87□□□□□ -0.99
GPNMB-201ENST00000258733 CLPPQ16740 277 aaPredicted RBP8.87□□□□□ -0.99
GPNMB-201ENST00000258733 KANK4Q5T7N3 995 aaPredicted RBP8.87□□□□□ -0.99
GPNMB-201ENST00000258733 ARHGEF25Q86VW2 580 aa8.87□□□□□ -0.99
GPNMB-201ENST00000258733 LMNTD2Q8IXW0 634 aa8.87□□□□□ -0.99
GPNMB-201ENST00000258733 SMYD1Q8NB12 490 aa8.87□□□□□ -0.99
GPNMB-201ENST00000258733 CRBNQ96SW2 442 aa8.87□□□□□ -0.99
GPNMB-201ENST00000258733 SH3GL1Q99961 368 aa8.87□□□□□ -0.99
GPNMB-201ENST00000258733 ZMAT5Q9UDW3 170 aaKnown RBP8.87□□□□□ -0.99
GPNMB-201ENST00000258733 FRMD3A2A2Y4 597 aa8.87□□□□□ -0.99
GPNMB-201ENST00000258733 TMEM110-MUSTN1A8MSY1 372 aa8.87□□□□□ -0.99
GPNMB-201ENST00000258733 RPSAP08865 295 aaKnown RBP8.87□□□□□ -0.99
GPNMB-201ENST00000258733 EVA1CP58658 441 aa8.87□□□□□ -0.99
GPNMB-201ENST00000258733 PARP10Q53GL7 1025 aa8.87□□□□□ -0.99
GPNMB-201ENST00000258733 COBLL1Q53SF7 1204 aa8.87□□□□□ -0.99
GPNMB-201ENST00000258733 RCSD1Q6JBY9 416 aa8.87□□□□□ -0.99
GPNMB-201ENST00000258733 NEK10Q6ZWH5 1172 aa8.87□□□□□ -0.99
GPNMB-201ENST00000258733 AFAP1Q8N556 730 aa8.87□□□□□ -0.99
GPNMB-201ENST00000258733 FAM76AQ8TAV0 307 aa8.87□□□□□ -0.99
GPNMB-201ENST00000258733 RBM41Q96IZ5 413 aaKnown RBP8.87□□□□□ -0.99
GPNMB-201ENST00000258733 TMCC3Q9ULS5 477 aa8.87□□□□□ -0.99
GPNMB-201ENST00000258733 CASKIN1Q8WXD9 1431 aa8.87□□□□□ -0.99
GPNMB-201ENST00000258733 AHCYL1O43865 530 aa8.87□□□□□ -0.99
GPNMB-201ENST00000258733 CEP104O60308 925 aa8.87□□□□□ -0.99
GPNMB-201ENST00000258733 NAA25Q14CX7 972 aa8.87□□□□□ -0.99
GPNMB-201ENST00000258733 ELF2Q15723 593 aa8.87□□□□□ -0.99
GPNMB-201ENST00000258733 SLC4A8Q2Y0W8 1093 aa8.87□□□□□ -0.99
GPNMB-201ENST00000258733 FBXW10Q5XX13 1052 aa8.87□□□□□ -0.99
GPNMB-201ENST00000258733 FOXR1Q6PIV2 292 aa8.87□□□□□ -0.99
GPNMB-201ENST00000258733 CDC5LQ99459 802 aaKnown RBP8.87□□□□□ -0.99
GPNMB-201ENST00000258733 SENP7Q9BQF6 1050 aa8.87□□□□□ -0.99
GPNMB-201ENST00000258733 MAK16Q9BXY0 300 aaKnown RBP8.87□□□□□ -0.99
GPNMB-201ENST00000258733 UBXN6Q9BZV1 441 aa8.87□□□□□ -0.99
GPNMB-201ENST00000258733 ARHGAP31Q2M1Z3 1444 aa8.86□□□□□ -0.99
GPNMB-201ENST00000258733 EVC2Q86UK5 1308 aa8.86□□□□□ -0.99
GPNMB-201ENST00000258733 SNAPC4Q5SXM2 1469 aa8.86□□□□□ -0.99
GPNMB-201ENST00000258733 ZMYM3Q14202 1370 aa8.86□□□□□ -0.99
GPNMB-201ENST00000258733 ATP8B1O43520 1251 aa8.86□□□□□ -0.99
GPNMB-201ENST00000258733 H2AFXP16104 143 aaPredicted RBP8.86□□□□□ -0.99
GPNMB-201ENST00000258733 OAS2P29728 719 aaKnown RBP8.86□□□□□ -0.99
GPNMB-201ENST00000258733 PKD2Q13563 968 aa8.86□□□□□ -0.99
GPNMB-201ENST00000258733 GNPTABQ3T906 1256 aa8.86□□□□□ -0.99
GPNMB-201ENST00000258733 WLSQ5T9L3 541 aa8.86□□□□□ -0.99
GPNMB-201ENST00000258733 ZCCHC8Q6NZY4 707 aaKnown RBP8.86□□□□□ -0.99
GPNMB-201ENST00000258733 SLC7A5P1Q8MH63 180 aa8.86□□□□□ -0.99
GPNMB-201ENST00000258733 IP6K2Q9UHH9 426 aa8.86□□□□□ -0.99
GPNMB-201ENST00000258733 ADAM21Q9UKJ8 722 aa8.86□□□□□ -0.99
GPNMB-201ENST00000258733 MBD4O95243 580 aa8.86□□□□□ -0.99
GPNMB-201ENST00000258733 FESP07332 822 aa8.86□□□□□ -0.99
GPNMB-201ENST00000258733 MATR3P43243 847 aaKnown RBP eCLIP8.86□□□□□ -0.99
GPNMB-201ENST00000258733 SLC8A3P57103 927 aa8.86□□□□□ -0.99
GPNMB-201ENST00000258733 WASHC5Q12768 1159 aa8.86□□□□□ -0.99
GPNMB-201ENST00000258733 MKRN3Q13064 507 aaKnown RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms