RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 CEP170BQ9Y4F5 1589 aaPredicted RBP5.51□□□□□ -1.53
USP44-201ENST00000258499 AP5Z1O43299 807 aa5.51□□□□□ -1.53
USP44-201ENST00000258499 FAM160A1Q05DH4 1040 aa5.51□□□□□ -1.53
USP44-201ENST00000258499 IFIT5Q13325 482 aaKnown RBP5.51□□□□□ -1.53
USP44-201ENST00000258499 LDHAL6AQ6ZMR3 332 aa5.51□□□□□ -1.53
USP44-201ENST00000258499 KIF6Q6ZMV9 814 aa5.51□□□□□ -1.53
USP44-201ENST00000258499 C11orf57Q6ZUT1 292 aaPredicted RBP5.51□□□□□ -1.53
USP44-201ENST00000258499 JMYQ8N9B5 988 aa5.51□□□□□ -1.53
USP44-201ENST00000258499 PGBD1Q96JS3 809 aa5.51□□□□□ -1.53
USP44-201ENST00000258499 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.51□□□□□ -1.53
USP44-201ENST00000258499 KCNF1Q9H3M0 494 aa5.51□□□□□ -1.53
USP44-201ENST00000258499 GPHNQ9NQX3 736 aaPredicted RBP5.51□□□□□ -1.53
USP44-201ENST00000258499 MTMR7Q9Y216 660 aa5.51□□□□□ -1.53
USP44-201ENST00000258499 AXIN2Q9Y2T1 843 aa5.51□□□□□ -1.53
USP44-201ENST00000258499 A0A0U1RQG5 324 aaPredicted RBP5.51□□□□□ -1.53
USP44-201ENST00000258499 ERICH2A1L162 156 aa5.51□□□□□ -1.53
USP44-201ENST00000258499 SMTNL1A8MU46 457 aa5.51□□□□□ -1.53
USP44-201ENST00000258499 SPTLC2O15270 562 aa5.51□□□□□ -1.53
USP44-201ENST00000258499 CAVIN2O95810 425 aa5.51□□□□□ -1.53
USP44-201ENST00000258499 IL15P40933 162 aaPredicted RBP5.51□□□□□ -1.53
USP44-201ENST00000258499 LRRC24Q50LG9 513 aa5.51□□□□□ -1.53
USP44-201ENST00000258499 KLHL10Q6JEL2 608 aa5.51□□□□□ -1.53
USP44-201ENST00000258499 TTLL7Q6ZT98 887 aa5.51□□□□□ -1.53
USP44-201ENST00000258499 CCDC34Q96HJ3 373 aa5.51□□□□□ -1.53
USP44-201ENST00000258499 PAXBP1Q9Y5B6 917 aa5.51□□□□□ -1.53
USP44-201ENST00000258499 E7EWF7 191 aa5.51□□□□□ -1.53
USP44-201ENST00000258499 RNF113AO15541 343 aaKnown RBP5.51□□□□□ -1.53
USP44-201ENST00000258499 PTPN12Q05209 780 aaKnown RBP5.51□□□□□ -1.53
USP44-201ENST00000258499 MTX1Q13505 466 aa5.51□□□□□ -1.53
USP44-201ENST00000258499 ARHGEF25Q86VW2 580 aa5.51□□□□□ -1.53
USP44-201ENST00000258499 UBXN4Q92575 508 aa5.51□□□□□ -1.53
USP44-201ENST00000258499 AIDAQ96BJ3 306 aa5.51□□□□□ -1.53
USP44-201ENST00000258499 FAM89AQ96GI7 184 aa5.51□□□□□ -1.53
USP44-201ENST00000258499 GJB4Q9NTQ9 266 aa5.51□□□□□ -1.53
USP44-201ENST00000258499 PREX1Q8TCU6 1659 aa5.5□□□□□ -1.53
USP44-201ENST00000258499 SYKP43405 635 aa5.5□□□□□ -1.53
USP44-201ENST00000258499 METAP2P50579 478 aaKnown RBP eCLIP5.5□□□□□ -1.53
USP44-201ENST00000258499 PTPN21Q16825 1174 aa5.5□□□□□ -1.53
USP44-201ENST00000258499 SYT10Q6XYQ8 523 aa5.5□□□□□ -1.53
USP44-201ENST00000258499 CNNM3Q8NE01 707 aa5.5□□□□□ -1.53
USP44-201ENST00000258499 NCOA7Q8NI08 942 aa5.5□□□□□ -1.53
USP44-201ENST00000258499 ALG1Q9BT22 464 aa5.5□□□□□ -1.53
USP44-201ENST00000258499 CGNQ9P2M7 1197 aaKnown RBP5.5□□□□□ -1.53
USP44-201ENST00000258499 DNAI1Q9UI46 699 aa5.5□□□□□ -1.53
USP44-201ENST00000258499 HOOK1Q9UJC3 728 aaKnown RBP5.5□□□□□ -1.53
USP44-201ENST00000258499 ADAMTS13Q76LX8 1427 aa5.5□□□□□ -1.53
USP44-201ENST00000258499 REREQ9P2R6 1566 aa5.5□□□□□ -1.53
USP44-201ENST00000258499 NEMFO60524 1076 aa5.5□□□□□ -1.53
USP44-201ENST00000258499 HSPD1P10809 573 aaKnown RBP5.5□□□□□ -1.53
USP44-201ENST00000258499 TOP1P11387 765 aaKnown RBP5.5□□□□□ -1.53
USP44-201ENST00000258499 GTF2E1P29083 439 aaPredicted RBP5.5□□□□□ -1.53
USP44-201ENST00000258499 ST3GAL1Q11201 340 aa5.5□□□□□ -1.53
USP44-201ENST00000258499 SLC9C2Q5TAH2 1124 aa5.5□□□□□ -1.53
USP44-201ENST00000258499 HELBQ8NG08 1087 aaPredicted RBP5.5□□□□□ -1.53
USP44-201ENST00000258499 KCNG4Q8TDN1 519 aa5.5□□□□□ -1.53
USP44-201ENST00000258499 PUS3Q9BZE2 481 aaKnown RBP5.5□□□□□ -1.53
USP44-201ENST00000258499 ZSWIM4Q9H7M6 989 aa5.5□□□□□ -1.53
USP44-201ENST00000258499 COPRSQ9NQ92 184 aa5.5□□□□□ -1.53
USP44-201ENST00000258499 ARGLU1Q9NWB6 273 aaPredicted RBP5.5□□□□□ -1.53
USP44-201ENST00000258499 AKAP2Q9Y2D5 859 aa5.5□□□□□ -1.53
USP44-201ENST00000258499 ELP1O95163 1332 aa5.5□□□□□ -1.53
USP44-201ENST00000258499 GOLGA8AA7E2F4 631 aa5.5□□□□□ -1.53
USP44-201ENST00000258499 TDO2P48775 406 aa5.5□□□□□ -1.53
USP44-201ENST00000258499 UBASH3AP57075 661 aa5.5□□□□□ -1.53
USP44-201ENST00000258499 GSDMDP57764 484 aa5.5□□□□□ -1.53
USP44-201ENST00000258499 RESTQ13127 1097 aa5.5□□□□□ -1.53
USP44-201ENST00000258499 ELF2Q15723 593 aa5.5□□□□□ -1.53
USP44-201ENST00000258499 SPECC1Q5M775 1068 aa5.5□□□□□ -1.53
USP44-201ENST00000258499 SMAP1Q8IYB5 467 aaPredicted RBP5.5□□□□□ -1.53
USP44-201ENST00000258499 NSUN7Q8NE18 718 aaKnown RBP5.5□□□□□ -1.53
USP44-201ENST00000258499 CPLX3Q8WVH0 158 aa5.5□□□□□ -1.53
USP44-201ENST00000258499 DCAF5Q96JK2 942 aa5.5□□□□□ -1.53
USP44-201ENST00000258499 HAUS7Q99871 368 aa5.5□□□□□ -1.53
USP44-201ENST00000258499 MYL10Q9BUA6 226 aa5.5□□□□□ -1.53
USP44-201ENST00000258499 SLC26A6Q9BXS9 759 aa5.5□□□□□ -1.53
USP44-201ENST00000258499 ZNF215Q9UL58 517 aaPredicted RBP5.5□□□□□ -1.53
USP44-201ENST00000258499 EYA2O00167 538 aa5.49□□□□□ -1.53
USP44-201ENST00000258499 IFIT3O14879 490 aaKnown RBP5.49□□□□□ -1.53
USP44-201ENST00000258499 POLR3GO15318 223 aaPredicted RBP5.49□□□□□ -1.53
USP44-201ENST00000258499 CCDC144BQ3MJ40 725 aa5.49□□□□□ -1.53
USP44-201ENST00000258499 PI16Q6UXB8 463 aa5.49□□□□□ -1.53
USP44-201ENST00000258499 TRIM22Q8IYM9 498 aa5.49□□□□□ -1.53
USP44-201ENST00000258499 PHKBQ93100 1093 aa5.49□□□□□ -1.53
USP44-201ENST00000258499 KAZALD1Q96I82 304 aa5.49□□□□□ -1.53
USP44-201ENST00000258499 TRERF1Q96PN7 1200 aa5.49□□□□□ -1.53
USP44-201ENST00000258499 NAPBQ9H115 298 aa5.49□□□□□ -1.53
USP44-201ENST00000258499 ABCF2Q9UG63 623 aa5.49□□□□□ -1.53
USP44-201ENST00000258499 MYO5BQ9ULV0 1848 aa5.49□□□□□ -1.53
USP44-201ENST00000258499 MINDY4BA8MYZ0 360 aa5.49□□□□□ -1.53
USP44-201ENST00000258499 TULP1O00294 542 aaPredicted RBP5.49□□□□□ -1.53
USP44-201ENST00000258499 CDKL5O76039 1030 aa5.49□□□□□ -1.53
USP44-201ENST00000258499 PHKG2P15735 406 aa5.49□□□□□ -1.53
USP44-201ENST00000258499 IARSP41252 1262 aaKnown RBP5.49□□□□□ -1.53
USP44-201ENST00000258499 NDUFA8P51970 172 aa5.49□□□□□ -1.53
USP44-201ENST00000258499 SART3Q15020 963 aaKnown RBP5.49□□□□□ -1.53
USP44-201ENST00000258499 ATP2B3Q16720 1220 aa5.49□□□□□ -1.53
USP44-201ENST00000258499 TMEM67Q5HYA8 995 aa5.49□□□□□ -1.53
USP44-201ENST00000258499 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.49□□□□□ -1.53
USP44-201ENST00000258499 VPS37DQ86XT2 251 aa5.49□□□□□ -1.53
USP44-201ENST00000258499 LRRC8AQ8IWT6 810 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms