RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 ANKRD44Q8N8A2 993 aa15.54■□□□□ 0.08
PRPF38A-201ENST00000257181 FOXD4L1Q9NU39 408 aa15.54■□□□□ 0.08
PRPF38A-201ENST00000257181 ERBB3P21860 1342 aa15.54■□□□□ 0.08
PRPF38A-201ENST00000257181 GPS2Q13227 327 aa15.54■□□□□ 0.08
PRPF38A-201ENST00000257181 MYO3AQ8NEV4 1616 aa15.54■□□□□ 0.08
PRPF38A-201ENST00000257181 RPS6KA4O75676 772 aa15.53■□□□□ 0.08
PRPF38A-201ENST00000257181 GNA11P29992 359 aa15.53■□□□□ 0.08
PRPF38A-201ENST00000257181 MMP14P50281 582 aa15.53■□□□□ 0.08
PRPF38A-201ENST00000257181 PAG1Q9NWQ8 432 aa15.53■□□□□ 0.08
PRPF38A-201ENST00000257181 HDAC1Q13547 482 aaPredicted RBP15.53■□□□□ 0.08
PRPF38A-201ENST00000257181 ZHX3Q9H4I2 956 aa15.53■□□□□ 0.08
PRPF38A-201ENST00000257181 SPHKAPQ2M3C7 1700 aa15.53■□□□□ 0.08
PRPF38A-201ENST00000257181 CHL1O00533 1208 aa15.53■□□□□ 0.08
PRPF38A-201ENST00000257181 MASTLQ96GX5 879 aa15.53■□□□□ 0.08
PRPF38A-201ENST00000257181 SETBP1Q9Y6X0 1596 aa15.53■□□□□ 0.08
PRPF38A-201ENST00000257181 IRX3P78415 501 aaPredicted RBP15.53■□□□□ 0.08
PRPF38A-201ENST00000257181 FAM83GA6ND36 823 aa15.52■□□□□ 0.08
PRPF38A-201ENST00000257181 NEBLO76041 1014 aa15.52■□□□□ 0.08
PRPF38A-201ENST00000257181 IARSP41252 1262 aaKnown RBP15.52■□□□□ 0.08
PRPF38A-201ENST00000257181 TNNT3P45378 269 aaPredicted RBP15.52■□□□□ 0.08
PRPF38A-201ENST00000257181 ALKQ9UM73 1620 aa15.52■□□□□ 0.08
PRPF38A-201ENST00000257181 EAPPQ56P03 285 aaPredicted RBP15.52■□□□□ 0.08
PRPF38A-201ENST00000257181 TTLL6Q8N841 843 aa15.52■□□□□ 0.08
PRPF38A-201ENST00000257181 SPDYE3A6NKU9 549 aa15.52■□□□□ 0.08
PRPF38A-201ENST00000257181 MAP4K4O95819 1239 aaPredicted RBP15.52■□□□□ 0.08
PRPF38A-201ENST00000257181 OSBPP22059 807 aa15.52■□□□□ 0.08
PRPF38A-201ENST00000257181 CROCC2H7BZ55 1655 aa15.52■□□□□ 0.07
PRPF38A-201ENST00000257181 IGSF1Q8N6C5 1336 aa15.52■□□□□ 0.07
PRPF38A-201ENST00000257181 RNF216Q9NWF9 866 aaPredicted RBP15.52■□□□□ 0.07
PRPF38A-201ENST00000257181 KDM2BQ8NHM5 1336 aa15.52■□□□□ 0.07
PRPF38A-201ENST00000257181 C1orf167Q5SNV9 1468 aa15.52■□□□□ 0.07
PRPF38A-201ENST00000257181 SMTNL1A8MU46 457 aa15.52■□□□□ 0.07
PRPF38A-201ENST00000257181 TRIM27P14373 513 aa15.52■□□□□ 0.07
PRPF38A-201ENST00000257181 USP14P54578 494 aa15.52■□□□□ 0.07
PRPF38A-201ENST00000257181 ZBTB38Q8NAP3 1195 aaPredicted RBP15.52■□□□□ 0.07
PRPF38A-201ENST00000257181 PCP11498 1178 aaKnown RBP15.51■□□□□ 0.07
PRPF38A-201ENST00000257181 ATP2B1P20020 1258 aa15.51■□□□□ 0.07
PRPF38A-201ENST00000257181 GRM1Q13255 1194 aa15.51■□□□□ 0.07
PRPF38A-201ENST00000257181 PICALMQ13492 652 aa15.51■□□□□ 0.07
PRPF38A-201ENST00000257181 C8orf76Q96K31 380 aa15.51■□□□□ 0.07
PRPF38A-201ENST00000257181 CRKLP46109 303 aaKnown RBP15.51■□□□□ 0.07
PRPF38A-201ENST00000257181 SERPINB2P05120 415 aa15.51■□□□□ 0.07
PRPF38A-201ENST00000257181 TICAM2Q86XR7 235 aa15.51■□□□□ 0.07
PRPF38A-201ENST00000257181 USP31Q70CQ4 1352 aa15.51■□□□□ 0.07
PRPF38A-201ENST00000257181 PALLDQ8WX93 1383 aa15.51■□□□□ 0.07
PRPF38A-201ENST00000257181 SSBP05455 408 aaKnown RBP eCLIP15.51■□□□□ 0.07
PRPF38A-201ENST00000257181 ZFYVE27Q5T4F4 411 aa15.51■□□□□ 0.07
PRPF38A-201ENST00000257181 SLC9C2Q5TAH2 1124 aa15.51■□□□□ 0.07
PRPF38A-201ENST00000257181 KDRP35968 1356 aa15.5■□□□□ 0.07
PRPF38A-201ENST00000257181 F8W031 263 aaPredicted RBP15.5■□□□□ 0.07
PRPF38A-201ENST00000257181 CTSWP56202 376 aa15.5■□□□□ 0.07
PRPF38A-201ENST00000257181 UBE4AQ14139 1066 aa15.5■□□□□ 0.07
PRPF38A-201ENST00000257181 HACE1Q8IYU2 909 aa15.5■□□□□ 0.07
PRPF38A-201ENST00000257181 TRPM1Q7Z4N2 1603 aa15.5■□□□□ 0.07
PRPF38A-201ENST00000257181 ZEB2O60315 1214 aa15.5■□□□□ 0.07
PRPF38A-201ENST00000257181 CASTP20810 708 aaKnown RBP15.5■□□□□ 0.07
PRPF38A-201ENST00000257181 METAP2P50579 478 aaKnown RBP eCLIP15.5■□□□□ 0.07
PRPF38A-201ENST00000257181 EIF4A1P60842 406 aaKnown RBP15.5■□□□□ 0.07
PRPF38A-201ENST00000257181 FAM114A1Q8IWE2 563 aa15.5■□□□□ 0.07
PRPF38A-201ENST00000257181 LRRC45Q96CN5 670 aa15.5■□□□□ 0.07
PRPF38A-201ENST00000257181 MCM9Q9NXL9 1143 aa15.5■□□□□ 0.07
PRPF38A-201ENST00000257181 K7ELQ4 463 aaPredicted RBP15.49■□□□□ 0.07
PRPF38A-201ENST00000257181 VPS36Q86VN1 386 aa15.49■□□□□ 0.07
PRPF38A-201ENST00000257181 CHURC1Q8WUH1 139 aa15.49■□□□□ 0.07
PRPF38A-201ENST00000257181 ME1P48163 572 aa15.49■□□□□ 0.07
PRPF38A-201ENST00000257181 FMNL3Q8IVF7 1028 aa15.49■□□□□ 0.07
PRPF38A-201ENST00000257181 ANAPC15P60006 121 aa15.49■□□□□ 0.07
PRPF38A-201ENST00000257181 FOXD4L5Q5VV16 416 aaPredicted RBP15.49■□□□□ 0.07
PRPF38A-201ENST00000257181 FOXD4L4Q8WXT5 416 aaPredicted RBP15.49■□□□□ 0.07
PRPF38A-201ENST00000257181 SCAND2PQ9GZW5 306 aaPredicted RBP15.49■□□□□ 0.07
PRPF38A-201ENST00000257181 IREB2P48200 963 aaKnown RBP15.48■□□□□ 0.07
PRPF38A-201ENST00000257181 NEK1Q96PY6 1258 aa15.48■□□□□ 0.07
PRPF38A-201ENST00000257181 MYCNP04198 464 aaPredicted RBP15.48■□□□□ 0.07
PRPF38A-201ENST00000257181 CCDC172P0C7W6 258 aa15.48■□□□□ 0.07
PRPF38A-201ENST00000257181 NAP1L1P55209 391 aaKnown RBP15.48■□□□□ 0.07
PRPF38A-201ENST00000257181 NOD1Q9Y239 953 aa15.48■□□□□ 0.07
PRPF38A-201ENST00000257181 HSPA1LP34931 641 aa15.48■□□□□ 0.07
PRPF38A-201ENST00000257181 ARPP21Q9UBL0 812 aaPredicted RBP15.48■□□□□ 0.07
PRPF38A-201ENST00000257181 STX8Q9UNK0 236 aa15.48■□□□□ 0.07
PRPF38A-201ENST00000257181 TBCAO75347 108 aaKnown RBP15.48■□□□□ 0.07
PRPF38A-201ENST00000257181 STK11IPQ8N1F8 1099 aa15.48■□□□□ 0.07
PRPF38A-201ENST00000257181 ZNF397Q8NF99 534 aaPredicted RBP15.48■□□□□ 0.07
PRPF38A-201ENST00000257181 REREQ9P2R6 1566 aa15.48■□□□□ 0.07
PRPF38A-201ENST00000257181 RC3H1Q5TC82 1133 aaKnown RBP15.47■□□□□ 0.07
PRPF38A-201ENST00000257181 PRPF40BQ6NWY9 871 aaKnown RBP15.47■□□□□ 0.07
PRPF38A-201ENST00000257181 CTAGE5O15320 804 aa15.47■□□□□ 0.07
PRPF38A-201ENST00000257181 RMND1Q9NWS8 449 aa15.47■□□□□ 0.07
PRPF38A-201ENST00000257181 M0QZ92 97 aa15.47■□□□□ 0.07
PRPF38A-201ENST00000257181 FOSBP53539 338 aa15.47■□□□□ 0.07
PRPF38A-201ENST00000257181 BMP2KLQ5H9B9 411 aa15.47■□□□□ 0.07
PRPF38A-201ENST00000257181 CARD14Q9BXL6 1004 aa15.47■□□□□ 0.07
PRPF38A-201ENST00000257181 PNMA3Q9UL41 463 aa15.47■□□□□ 0.07
PRPF38A-201ENST00000257181 IBTKQ9P2D0 1353 aaPredicted RBP15.47■□□□□ 0.07
PRPF38A-201ENST00000257181 PARP1P09874 1014 aaKnown RBP15.47■□□□□ 0.07
PRPF38A-201ENST00000257181 PLS1Q14651 629 aa15.47■□□□□ 0.07
PRPF38A-201ENST00000257181 FERMT1Q9BQL6 677 aa15.47■□□□□ 0.07
PRPF38A-201ENST00000257181 ATG3Q9NT62 314 aa15.47■□□□□ 0.07
PRPF38A-201ENST00000257181 DDX17Q92841 729 aaKnown RBP15.46■□□□□ 0.07
PRPF38A-201ENST00000257181 ACBD3Q9H3P7 528 aa15.46■□□□□ 0.07
PRPF38A-201ENST00000257181 TAOK3Q9H2K8 898 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms