RNA–Protein interactions for RNA: ENST00000251654.8

PCCB-201, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCCB, Length 1,833 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-201ENST00000251654 PRPF40BQ6NWY9 871 aaKnown RBP20.78■□□□□ 0.92
PCCB-201ENST00000251654 UPF3BQ9BZI7 483 aaKnown RBP20.78■□□□□ 0.92
PCCB-201ENST00000251654 POTEAQ6S8J7 498 aa20.77■□□□□ 0.92
PCCB-201ENST00000251654 HELLSQ9NRZ9 838 aa20.77■□□□□ 0.92
PCCB-201ENST00000251654 RNF113AO15541 343 aaKnown RBP20.76■□□□□ 0.91
PCCB-201ENST00000251654 ZNF827Q17R98 1081 aa20.76■□□□□ 0.91
PCCB-201ENST00000251654 CCDC129Q6ZRS4 1044 aa20.76■□□□□ 0.91
PCCB-201ENST00000251654 CNBD1Q8NA66 436 aa20.76■□□□□ 0.91
PCCB-201ENST00000251654 DOCK2Q92608 1830 aa20.76■□□□□ 0.91
PCCB-201ENST00000251654 UQCRFS1P1P0C7P4 283 aa20.76■□□□□ 0.91
PCCB-201ENST00000251654 TM4SF1P30408 202 aa20.76■□□□□ 0.91
PCCB-201ENST00000251654 CREB3L3Q68CJ9 461 aa20.76■□□□□ 0.91
PCCB-201ENST00000251654 IL27Q8NEV9 243 aa20.76■□□□□ 0.91
PCCB-201ENST00000251654 CYP2E1P05181 493 aaPredicted RBP20.75■□□□□ 0.91
PCCB-201ENST00000251654 PRR5LQ6MZQ0 368 aa20.75■□□□□ 0.91
PCCB-201ENST00000251654 MINPP1Q9UNW1 487 aa20.75■□□□□ 0.91
PCCB-201ENST00000251654 MAST3O60307 1309 aa20.75■□□□□ 0.91
PCCB-201ENST00000251654 RPS8P62241 208 aaKnown RBP20.74■□□□□ 0.91
PCCB-201ENST00000251654 NBR1Q14596 966 aa20.74■□□□□ 0.91
PCCB-201ENST00000251654 AKT1S1Q96B36 256 aa20.74■□□□□ 0.91
PCCB-201ENST00000251654 SLC27A2O14975 620 aa20.74■□□□□ 0.91
PCCB-201ENST00000251654 NPHP1O15259 732 aa20.74■□□□□ 0.91
PCCB-201ENST00000251654 ZFYP08048 801 aaPredicted RBP20.74■□□□□ 0.91
PCCB-201ENST00000251654 KCNJ4P48050 445 aa20.74■□□□□ 0.91
PCCB-201ENST00000251654 MCM2P49736 904 aa20.74■□□□□ 0.91
PCCB-201ENST00000251654 LRRFIP1Q32MZ4 808 aaKnown RBP20.74■□□□□ 0.91
PCCB-201ENST00000251654 HMG20BQ9P0W2 317 aa20.74■□□□□ 0.91
PCCB-201ENST00000251654 RPAP1Q9BWH6 1393 aaPredicted RBP20.73■□□□□ 0.91
PCCB-201ENST00000251654 HSP90AA1P07900 732 aaKnown RBP20.73■□□□□ 0.91
PCCB-201ENST00000251654 RASGRF1Q13972 1273 aa20.73■□□□□ 0.91
PCCB-201ENST00000251654 ADCK5Q3MIX3 580 aa20.73■□□□□ 0.91
PCCB-201ENST00000251654 TTC14Q96N46 770 aa20.73■□□□□ 0.91
PCCB-201ENST00000251654 CHMP5Q9NZZ3 219 aa20.73■□□□□ 0.91
PCCB-201ENST00000251654 ZKSCAN1P17029 563 aaPredicted RBP20.72■□□□□ 0.91
PCCB-201ENST00000251654 TTF1Q15361 905 aaPredicted RBP20.72■□□□□ 0.91
PCCB-201ENST00000251654 FBXO41Q8TF61 875 aa20.72■□□□□ 0.91
PCCB-201ENST00000251654 OSBP2Q969R2 916 aa20.72■□□□□ 0.91
PCCB-201ENST00000251654 TM6SF1Q9BZW5 370 aa20.72■□□□□ 0.91
PCCB-201ENST00000251654 WTIPA6NIX2 430 aaPredicted RBP20.71■□□□□ 0.91
PCCB-201ENST00000251654 DDR1Q08345 913 aa20.71■□□□□ 0.91
PCCB-201ENST00000251654 UBE4AQ14139 1066 aa20.71■□□□□ 0.91
PCCB-201ENST00000251654 SPATA5Q8NB90 893 aa20.71■□□□□ 0.91
PCCB-201ENST00000251654 PIH1D3Q9NQM4 214 aaKnown RBP20.71■□□□□ 0.91
PCCB-201ENST00000251654 TFCP2L1Q9NZI6 479 aa20.71■□□□□ 0.91
PCCB-201ENST00000251654 TAF6LQ9Y6J9 622 aa20.71■□□□□ 0.91
PCCB-201ENST00000251654 ZNF804BA4D1E1 1349 aa20.71■□□□□ 0.91
PCCB-201ENST00000251654 M0R2C6 588 aa20.71■□□□□ 0.91
PCCB-201ENST00000251654 SERPINB2P05120 415 aa20.71■□□□□ 0.91
PCCB-201ENST00000251654 CASTP20810 708 aaKnown RBP20.71■□□□□ 0.91
PCCB-201ENST00000251654 BCAMP50895 628 aa20.71■□□□□ 0.91
PCCB-201ENST00000251654 NFKBIBQ15653 356 aa20.71■□□□□ 0.91
PCCB-201ENST00000251654 VPS53Q5VIR6 699 aa20.71■□□□□ 0.91
PCCB-201ENST00000251654 RNF20Q5VTR2 975 aa20.71■□□□□ 0.91
PCCB-201ENST00000251654 TMX3Q96JJ7 454 aa20.71■□□□□ 0.91
PCCB-201ENST00000251654 FOXD4L1Q9NU39 408 aa20.71■□□□□ 0.91
PCCB-201ENST00000251654 TSGA10IPQ3SY00 556 aa20.7■□□□□ 0.9
PCCB-201ENST00000251654 JAKMIP1Q96N16 626 aaKnown RBP20.7■□□□□ 0.9
PCCB-201ENST00000251654 ZSWIM6Q9HCJ5 1215 aa20.7■□□□□ 0.9
PCCB-201ENST00000251654 U3KPZ7 1027 aaPredicted RBP20.7■□□□□ 0.9
PCCB-201ENST00000251654 POLRMTO00411 1230 aaKnown RBP20.69■□□□□ 0.9
PCCB-201ENST00000251654 APPBP2Q92624 585 aa20.69■□□□□ 0.9
PCCB-201ENST00000251654 DSCC1Q9BVC3 393 aa20.69■□□□□ 0.9
PCCB-201ENST00000251654 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.69■□□□□ 0.91e-6■■■□□ 18.1
PCCB-201ENST00000251654 CIZ1Q9ULV3 898 aaPredicted RBP20.69■□□□□ 0.9
PCCB-201ENST00000251654 NRXN2Q9P2S2 1712 aa20.69■□□□□ 0.9
PCCB-201ENST00000251654 CRY2Q49AN0 593 aa20.69■□□□□ 0.9
PCCB-201ENST00000251654 COL23A1Q86Y22 540 aaPredicted RBP20.69■□□□□ 0.9
PCCB-201ENST00000251654 HSPD1P10809 573 aaKnown RBP20.68■□□□□ 0.9
PCCB-201ENST00000251654 CPA1P15085 419 aa20.68■□□□□ 0.9
PCCB-201ENST00000251654 ADD2P35612 726 aa20.68■□□□□ 0.9
PCCB-201ENST00000251654 ST5P78524 1137 aa20.67■□□□□ 0.9
PCCB-201ENST00000251654 COL9A3Q14050 684 aaPredicted RBP20.67■□□□□ 0.9
PCCB-201ENST00000251654 WASHC4Q2M389 1173 aa20.67■□□□□ 0.9
PCCB-201ENST00000251654 SLC9C2Q5TAH2 1124 aa20.67■□□□□ 0.9
PCCB-201ENST00000251654 PUS7LQ9H0K6 701 aaKnown RBP20.67■□□□□ 0.9
PCCB-201ENST00000251654 COL1A1P02452 1464 aaPredicted RBP20.67■□□□□ 0.9
PCCB-201ENST00000251654 ANKRD31Q8N7Z5 1873 aa20.67■□□□□ 0.9
PCCB-201ENST00000251654 FOXP2O15409 715 aa20.67■□□□□ 0.9
PCCB-201ENST00000251654 IDH1O75874 414 aaKnown RBP20.67■□□□□ 0.9
PCCB-201ENST00000251654 CYP21A2P08686 494 aa20.67■□□□□ 0.9
PCCB-201ENST00000251654 AK2P54819 239 aa20.67■□□□□ 0.9
PCCB-201ENST00000251654 GRAPQ13588 217 aa20.67■□□□□ 0.9
PCCB-201ENST00000251654 CUL4AQ13619 759 aa20.67■□□□□ 0.9
PCCB-201ENST00000251654 ZSCAN25Q6NSZ9 544 aa20.67■□□□□ 0.9
PCCB-201ENST00000251654 RUFY3Q7L099 469 aa20.67■□□□□ 0.9
PCCB-201ENST00000251654 GRAPLQ8TC17 118 aaPredicted RBP20.67■□□□□ 0.9
PCCB-201ENST00000251654 CYP46A1Q9Y6A2 500 aa20.67■□□□□ 0.9
PCCB-201ENST00000251654 GYG1P46976 350 aa20.66■□□□□ 0.9
PCCB-201ENST00000251654 UBE3CQ15386 1083 aa20.66■□□□□ 0.9
PCCB-201ENST00000251654 ANKRD2Q9GZV1 360 aa20.66■□□□□ 0.9
PCCB-201ENST00000251654 WWC3Q9ULE0 1092 aa20.66■□□□□ 0.9
PCCB-201ENST00000251654 MYH13Q9UKX3 1938 aa20.66■□□□□ 0.9
PCCB-201ENST00000251654 TCRBV5S4A2TA0A5A2 114 aa20.65■□□□□ 0.9
PCCB-201ENST00000251654 PDE6AP16499 860 aa20.65■□□□□ 0.9
PCCB-201ENST00000251654 NOL8Q76FK4 1167 aaKnown RBP20.65■□□□□ 0.9
PCCB-201ENST00000251654 ZGPATQ8N5A5 531 aaKnown RBP20.65■□□□□ 0.9
PCCB-201ENST00000251654 LAMA4Q16363 1823 aa20.65■□□□□ 0.9
PCCB-201ENST00000251654 FRAT2O75474 233 aaPredicted RBP20.64■□□□□ 0.9
PCCB-201ENST00000251654 FAM84BQ96KN1 310 aaPredicted RBP20.64■□□□□ 0.9
PCCB-201ENST00000251654 PNPLA7Q6ZV29 1317 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms