RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 TRERF1Q96PN7 1200 aa18.24■□□□□ 0.51
SIN3B-201ENST00000248054 KLF18A0A0U1RQI7 1052 aa18.24■□□□□ 0.51
SIN3B-201ENST00000248054 WTAPQ15007 396 aa18.24■□□□□ 0.51
SIN3B-201ENST00000248054 PUM3Q15397 648 aaKnown RBP18.24■□□□□ 0.51
SIN3B-201ENST00000248054 DNAJC10Q8IXB1 793 aa18.24■□□□□ 0.51
SIN3B-201ENST00000248054 LUC7LQ9NQ29 371 aaKnown RBP18.24■□□□□ 0.51
SIN3B-201ENST00000248054 SLC4A4Q9Y6R1 1079 aa18.24■□□□□ 0.51
SIN3B-201ENST00000248054 ERLIN1O75477 346 aa18.24■□□□□ 0.51
SIN3B-201ENST00000248054 SAMD1Q6SPF0 538 aaPredicted RBP18.24■□□□□ 0.51
SIN3B-201ENST00000248054 DHX32Q7L7V1 743 aaKnown RBP18.24■□□□□ 0.51
SIN3B-201ENST00000248054 ZNHIT6Q9NWK9 470 aaKnown RBP18.24■□□□□ 0.51
SIN3B-201ENST00000248054 ITGA6P23229 1130 aa18.24■□□□□ 0.51
SIN3B-201ENST00000248054 Q6ZUG5 572 aa18.24■□□□□ 0.51
SIN3B-201ENST00000248054 ADGRB1O14514 1584 aa18.24■□□□□ 0.51
SIN3B-201ENST00000248054 TECPR2O15040 1411 aa18.23■□□□□ 0.51
SIN3B-201ENST00000248054 ZBTB43O43298 467 aa18.23■□□□□ 0.51
SIN3B-201ENST00000248054 KCNQ3O43525 872 aa18.23■□□□□ 0.51
SIN3B-201ENST00000248054 KRT18P05783 430 aaKnown RBP18.23■□□□□ 0.51
SIN3B-201ENST00000248054 FAM89AQ96GI7 184 aa18.23■□□□□ 0.51
SIN3B-201ENST00000248054 AK2P54819 239 aa18.23■□□□□ 0.51
SIN3B-201ENST00000248054 PPFIBP1Q86W92 1011 aa18.23■□□□□ 0.51
SIN3B-201ENST00000248054 BMP15O95972 392 aa18.22■□□□□ 0.51
SIN3B-201ENST00000248054 ATP5JP18859 108 aa18.22■□□□□ 0.51
SIN3B-201ENST00000248054 UVSSAQ2YD98 709 aa18.22■□□□□ 0.51
SIN3B-201ENST00000248054 TSPY2A6NKD2 308 aa18.22■□□□□ 0.51
SIN3B-201ENST00000248054 PRIM1P49642 420 aaKnown RBP18.22■□□□□ 0.51
SIN3B-201ENST00000248054 PTPRUQ92729 1446 aa18.22■□□□□ 0.51
SIN3B-201ENST00000248054 KBTBD3Q8NAB2 608 aa18.22■□□□□ 0.51
SIN3B-201ENST00000248054 KAT14Q9H8E8 782 aa18.22■□□□□ 0.51
SIN3B-201ENST00000248054 DENND2AQ9ULE3 1009 aa18.22■□□□□ 0.51
SIN3B-201ENST00000248054 F13A1P00488 732 aa18.21■□□□□ 0.51
SIN3B-201ENST00000248054 PLCG2P16885 1265 aa18.21■□□□□ 0.51
SIN3B-201ENST00000248054 LEKR1Q6ZMV7 388 aa18.21■□□□□ 0.51
SIN3B-201ENST00000248054 GAS2L3Q86XJ1 694 aa18.21■□□□□ 0.51
SIN3B-201ENST00000248054 OSBPL3Q9H4L5 887 aa18.21■□□□□ 0.51
SIN3B-201ENST00000248054 SPATA31A3Q5VYP0 1347 aa18.21■□□□□ 0.51
SIN3B-201ENST00000248054 MROH5Q6ZUA9 1318 aa18.21■□□□□ 0.51
SIN3B-201ENST00000248054 GNAQP50148 359 aa18.21■□□□□ 0.51
SIN3B-201ENST00000248054 EIF3JO75822 258 aaKnown RBP18.21■□□□□ 0.51
SIN3B-201ENST00000248054 HLA-DOAP06340 250 aa18.21■□□□□ 0.51
SIN3B-201ENST00000248054 CALM1P0DP23 149 aa18.21■□□□□ 0.51
SIN3B-201ENST00000248054 CALM2P0DP24 149 aa18.21■□□□□ 0.51
SIN3B-201ENST00000248054 CALM3P0DP25 149 aa18.21■□□□□ 0.51
SIN3B-201ENST00000248054 MICU3Q86XE3 530 aa18.21■□□□□ 0.51
SIN3B-201ENST00000248054 MAGEB6P1A0A0J9YX57 407 aa18.21■□□□□ 0.5
SIN3B-201ENST00000248054 ZNF830Q96NB3 372 aaPredicted RBP18.21■□□□□ 0.5
SIN3B-201ENST00000248054 RAB34Q9BZG1 259 aa18.21■□□□□ 0.5
SIN3B-201ENST00000248054 STAP2Q9UGK3 403 aa18.21■□□□□ 0.5
SIN3B-201ENST00000248054 TRAPPC3LQ5T215 181 aa18.2■□□□□ 0.5
SIN3B-201ENST00000248054 DBNDD2Q9BQY9 259 aa18.2■□□□□ 0.5
SIN3B-201ENST00000248054 LARP6Q9BRS8 491 aaKnown RBP18.2■□□□□ 0.5
SIN3B-201ENST00000248054 LRRC7Q96NW7 1537 aa18.2■□□□□ 0.5
SIN3B-201ENST00000248054 PRC1O43663 620 aa18.2■□□□□ 0.5
SIN3B-201ENST00000248054 RTL9Q8NET4 1388 aa18.2■□□□□ 0.5
SIN3B-201ENST00000248054 USP32Q8NFA0 1604 aa18.2■□□□□ 0.5
SIN3B-201ENST00000248054 DMTNQ08495 405 aa18.2■□□□□ 0.5
SIN3B-201ENST00000248054 PPLO60437 1756 aa18.19■□□□□ 0.5
SIN3B-201ENST00000248054 NLRP5P59047 1200 aa18.19■□□□□ 0.5
SIN3B-201ENST00000248054 NECAB1Q8N987 351 aa18.19■□□□□ 0.5
SIN3B-201ENST00000248054 APPBP2Q92624 585 aa18.19■□□□□ 0.5
SIN3B-201ENST00000248054 ADAMTS13Q76LX8 1427 aa18.19■□□□□ 0.5
SIN3B-201ENST00000248054 CCDC194A0A1B0GVG4 234 aa18.19■□□□□ 0.5
SIN3B-201ENST00000248054 MPHOSPH10O00566 681 aaKnown RBP18.19■□□□□ 0.5
SIN3B-201ENST00000248054 ATL3Q6DD88 541 aa18.19■□□□□ 0.5
SIN3B-201ENST00000248054 FSIP1Q8NA03 581 aa18.19■□□□□ 0.5
SIN3B-201ENST00000248054 KCNG4Q8TDN1 519 aa18.19■□□□□ 0.5
SIN3B-201ENST00000248054 LPIN2Q92539 896 aa18.19■□□□□ 0.5
SIN3B-201ENST00000248054 TM6SF1Q9BZW5 370 aa18.19■□□□□ 0.5
SIN3B-201ENST00000248054 GUCY1B3Q02153 619 aa18.19■□□□□ 0.5
SIN3B-201ENST00000248054 KANK3Q6NY19 840 aa18.19■□□□□ 0.5
SIN3B-201ENST00000248054 XAGE2Q96GT9 111 aa18.19■□□□□ 0.5
SIN3B-201ENST00000248054 CALCOCO1Q9P1Z2 691 aa18.19■□□□□ 0.5
SIN3B-201ENST00000248054 USP25Q9UHP3 1055 aa18.19■□□□□ 0.5
SIN3B-201ENST00000248054 NOLC1Q14978 699 aaKnown RBP eCLIP18.18■□□□□ 0.5
SIN3B-201ENST00000248054 CCNL1Q9UK58 526 aaPredicted RBP18.18■□□□□ 0.5
SIN3B-201ENST00000248054 NEMFO60524 1076 aa18.18■□□□□ 0.5
SIN3B-201ENST00000248054 PCCAP05165 728 aaPredicted RBP18.18■□□□□ 0.5
SIN3B-201ENST00000248054 ANTXR1Q9H6X2 564 aa18.18■□□□□ 0.5
SIN3B-201ENST00000248054 DIP2AQ14689 1571 aa18.18■□□□□ 0.5
SIN3B-201ENST00000248054 RDXP35241 583 aaKnown RBP18.18■□□□□ 0.5
SIN3B-201ENST00000248054 IQCEQ6IPM2 695 aa18.18■□□□□ 0.5
SIN3B-201ENST00000248054 GNPATO15228 680 aa18.18■□□□□ 0.5
SIN3B-201ENST00000248054 RTN1Q16799 776 aa18.18■□□□□ 0.5
SIN3B-201ENST00000248054 COPRSQ9NQ92 184 aa18.18■□□□□ 0.5
SIN3B-201ENST00000248054 CERS3Q8IU89 383 aa18.17■□□□□ 0.5
SIN3B-201ENST00000248054 TIGD1Q96MW7 591 aa18.17■□□□□ 0.5
SIN3B-201ENST00000248054 RPS6KB1P23443 525 aa18.17■□□□□ 0.5
SIN3B-201ENST00000248054 CAMK4Q16566 473 aa18.17■□□□□ 0.5
SIN3B-201ENST00000248054 SLC26A6Q9BXS9 759 aa18.17■□□□□ 0.5
SIN3B-201ENST00000248054 HSPA4P34932 840 aa18.17■□□□□ 0.5
SIN3B-201ENST00000248054 TIMM10P62072 90 aa18.17■□□□□ 0.5
SIN3B-201ENST00000248054 LRSAM1Q6UWE0 723 aa18.17■□□□□ 0.5
SIN3B-201ENST00000248054 STX1AQ16623 288 aa18.16■□□□□ 0.5
SIN3B-201ENST00000248054 PPP1R1BQ9UD71 204 aaPredicted RBP18.16■□□□□ 0.5
SIN3B-201ENST00000248054 SLC27A2O14975 620 aa18.16■□□□□ 0.5
SIN3B-201ENST00000248054 IFIT1BQ5T764 474 aaKnown RBP18.16■□□□□ 0.5
SIN3B-201ENST00000248054 PPP1R9BQ96SB3 815 aa18.16■□□□□ 0.5
SIN3B-201ENST00000248054 LLPHQ9BRT6 129 aaKnown RBP18.16■□□□□ 0.5
SIN3B-201ENST00000248054 GPR108Q9NPR9 543 aa18.16■□□□□ 0.5
SIN3B-201ENST00000248054 SNX14Q9Y5W7 946 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms