RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 ORC3Q9UBD5 711 aaPredicted RBP14.76□□□□□ -0.05
RAB3IP-201ENST00000247833 SMC2O95347 1197 aa14.76□□□□□ -0.05
RAB3IP-201ENST00000247833 NSUN7Q8NE18 718 aaKnown RBP14.76□□□□□ -0.05
RAB3IP-201ENST00000247833 TRMT1Q9NXH9 659 aaKnown RBP14.76□□□□□ -0.05
RAB3IP-201ENST00000247833 NFAT5O94916 1531 aa14.75□□□□□ -0.05
RAB3IP-201ENST00000247833 RESTQ13127 1097 aa14.75□□□□□ -0.05
RAB3IP-201ENST00000247833 LDHAL6AQ6ZMR3 332 aa14.75□□□□□ -0.05
RAB3IP-201ENST00000247833 MYRIPQ8NFW9 859 aa14.75□□□□□ -0.05
RAB3IP-201ENST00000247833 TMOD3Q9NYL9 352 aa14.75□□□□□ -0.05
RAB3IP-201ENST00000247833 FUCA2Q9BTY2 467 aa14.75□□□□□ -0.05
RAB3IP-201ENST00000247833 GJB4Q9NTQ9 266 aa14.75□□□□□ -0.05
RAB3IP-201ENST00000247833 KDM6AO15550 1401 aaPredicted RBP14.75□□□□□ -0.05
RAB3IP-201ENST00000247833 TMEM94Q12767 1356 aa14.75□□□□□ -0.05
RAB3IP-201ENST00000247833 ELP1O95163 1332 aa14.75□□□□□ -0.05
RAB3IP-201ENST00000247833 RRP12Q5JTH9 1297 aaKnown RBP14.74□□□□□ -0.05
RAB3IP-201ENST00000247833 CADPS2Q86UW7 1296 aa14.74□□□□□ -0.05
RAB3IP-201ENST00000247833 PRIMPOLQ96LW4 560 aa14.74□□□□□ -0.05
RAB3IP-201ENST00000247833 MAST3O60307 1309 aa14.74□□□□□ -0.05
RAB3IP-201ENST00000247833 NPHP1O15259 732 aa14.74□□□□□ -0.05
RAB3IP-201ENST00000247833 PRC1O43663 620 aa14.74□□□□□ -0.05
RAB3IP-201ENST00000247833 ATP2B1P20020 1258 aa14.74□□□□□ -0.05
RAB3IP-201ENST00000247833 XAGE2Q96GT9 111 aa14.74□□□□□ -0.05
RAB3IP-201ENST00000247833 KCNF1Q9H3M0 494 aa14.74□□□□□ -0.05
RAB3IP-201ENST00000247833 HELLSQ9NRZ9 838 aa14.74□□□□□ -0.05
RAB3IP-201ENST00000247833 CTNNA3Q9UI47 895 aa14.74□□□□□ -0.05
RAB3IP-201ENST00000247833 RGPD2P0DJD1 1756 aa14.74□□□□□ -0.05
RAB3IP-201ENST00000247833 LRRC37A3O60309 1634 aa14.74□□□□□ -0.05
RAB3IP-201ENST00000247833 M0R2C6 588 aa14.74□□□□□ -0.05
RAB3IP-201ENST00000247833 ZNF213O14771 459 aa14.74□□□□□ -0.05
RAB3IP-201ENST00000247833 TNNT1P13805 278 aa14.74□□□□□ -0.05
RAB3IP-201ENST00000247833 ZAP70P43403 619 aa14.74□□□□□ -0.05
RAB3IP-201ENST00000247833 ZNF75DP51815 510 aa14.74□□□□□ -0.05
RAB3IP-201ENST00000247833 CEP57L1Q8IYX8 460 aa14.74□□□□□ -0.05
RAB3IP-201ENST00000247833 HELBQ8NG08 1087 aaPredicted RBP14.74□□□□□ -0.05
RAB3IP-201ENST00000247833 PFKFB2O60825 505 aa14.73□□□□□ -0.05
RAB3IP-201ENST00000247833 CBX1P83916 185 aa14.73□□□□□ -0.05
RAB3IP-201ENST00000247833 CCDC82Q8N4S0 544 aa14.73□□□□□ -0.05
RAB3IP-201ENST00000247833 AOPEPQ8N6M6 819 aa14.73□□□□□ -0.05
RAB3IP-201ENST00000247833 OSBP2Q969R2 916 aa14.73□□□□□ -0.05
RAB3IP-201ENST00000247833 COL15A1P39059 1388 aa14.73□□□□□ -0.05
RAB3IP-201ENST00000247833 RIOK3O14730 519 aaKnown RBP14.73□□□□□ -0.05
RAB3IP-201ENST00000247833 STX1AQ16623 288 aa14.73□□□□□ -0.05
RAB3IP-201ENST00000247833 SYNE4Q8N205 404 aa14.73□□□□□ -0.05
RAB3IP-201ENST00000247833 HEG1Q9ULI3 1381 aa14.73□□□□□ -0.05
RAB3IP-201ENST00000247833 MARCKSP29966 332 aaPredicted RBP14.73□□□□□ -0.05
RAB3IP-201ENST00000247833 FOXO4P98177 505 aa14.73□□□□□ -0.05
RAB3IP-201ENST00000247833 RABL6Q3YEC7 729 aaPredicted RBP14.73□□□□□ -0.05
RAB3IP-201ENST00000247833 C11orf57Q6ZUT1 292 aaPredicted RBP14.73□□□□□ -0.05
RAB3IP-201ENST00000247833 ATG9AQ7Z3C6 839 aa14.73□□□□□ -0.05
RAB3IP-201ENST00000247833 MICU3Q86XE3 530 aa14.73□□□□□ -0.05
RAB3IP-201ENST00000247833 KIAA1524Q8TCG1 905 aa14.73□□□□□ -0.05
RAB3IP-201ENST00000247833 MEGF6O75095 1541 aa14.73□□□□□ -0.05
RAB3IP-201ENST00000247833 DHX16O60231 1041 aaKnown RBP14.72□□□□□ -0.05
RAB3IP-201ENST00000247833 CCDC191Q8NCU4 936 aa14.72□□□□□ -0.05
RAB3IP-201ENST00000247833 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.72□□□□□ -0.051e-6■■□□□ 13.1
RAB3IP-201ENST00000247833 AKAP2Q9Y2D5 859 aa14.72□□□□□ -0.05
RAB3IP-201ENST00000247833 PDIA3P30101 505 aaKnown RBP14.72□□□□□ -0.05
RAB3IP-201ENST00000247833 ZMYM1Q5SVZ6 1142 aa14.72□□□□□ -0.05
RAB3IP-201ENST00000247833 SPDYE4A6NLX3 237 aa14.72□□□□□ -0.05
RAB3IP-201ENST00000247833 H7C1W4 665 aa14.72□□□□□ -0.05
RAB3IP-201ENST00000247833 ATP2B3Q16720 1220 aa14.72□□□□□ -0.05
RAB3IP-201ENST00000247833 USPL1Q5W0Q7 1092 aa14.72□□□□□ -0.05
RAB3IP-201ENST00000247833 MTERF4Q7Z6M4 381 aaKnown RBP14.72□□□□□ -0.05
RAB3IP-201ENST00000247833 DNAJC10Q8IXB1 793 aa14.72□□□□□ -0.05
RAB3IP-201ENST00000247833 ANO10Q9NW15 660 aa14.72□□□□□ -0.05
RAB3IP-201ENST00000247833 C1orf167Q5SNV9 1468 aa14.72□□□□□ -0.05
RAB3IP-201ENST00000247833 CPLX2Q6PUV4 134 aaKnown RBP14.71□□□□□ -0.05
RAB3IP-201ENST00000247833 DSCC1Q9BVC3 393 aa14.71□□□□□ -0.05
RAB3IP-201ENST00000247833 SLC9C2Q5TAH2 1124 aa14.71□□□□□ -0.05
RAB3IP-201ENST00000247833 NAT10Q9H0A0 1025 aaKnown RBP14.71□□□□□ -0.05
RAB3IP-201ENST00000247833 ARID5BQ14865 1188 aa14.71□□□□□ -0.06
RAB3IP-201ENST00000247833 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.71□□□□□ -0.06
RAB3IP-201ENST00000247833 TRMT112Q9UI30 125 aaKnown RBP14.71□□□□□ -0.06
RAB3IP-201ENST00000247833 FGAP02671 866 aa14.7□□□□□ -0.06
RAB3IP-201ENST00000247833 IL2RBP14784 551 aa14.7□□□□□ -0.06
RAB3IP-201ENST00000247833 TSGA10IPQ3SY00 556 aa14.7□□□□□ -0.06
RAB3IP-201ENST00000247833 PPP4R3BQ5MIZ7 849 aa14.7□□□□□ -0.06
RAB3IP-201ENST00000247833 PDCL2Q8N4E4 241 aa14.7□□□□□ -0.06
RAB3IP-201ENST00000247833 MRPS27Q92552 414 aaKnown RBP14.7□□□□□ -0.06
RAB3IP-201ENST00000247833 PCDH11XQ9BZA7 1347 aa14.7□□□□□ -0.06
RAB3IP-201ENST00000247833 PCDH11YQ9BZA8 1340 aa14.7□□□□□ -0.06
RAB3IP-201ENST00000247833 NCOA7Q8NI08 942 aa14.7□□□□□ -0.06
RAB3IP-201ENST00000247833 CHMP4CQ96CF2 233 aa14.7□□□□□ -0.06
RAB3IP-201ENST00000247833 LLPHQ9BRT6 129 aaKnown RBP14.7□□□□□ -0.06
RAB3IP-201ENST00000247833 TPM4P67936 248 aa14.7□□□□□ -0.06
RAB3IP-201ENST00000247833 TRIM29Q14134 588 aa14.7□□□□□ -0.06
RAB3IP-201ENST00000247833 SCARF1Q14162 830 aa14.7□□□□□ -0.06
RAB3IP-201ENST00000247833 CCDC112Q8NEF3 446 aa14.7□□□□□ -0.06
RAB3IP-201ENST00000247833 GOLPH3LQ9H4A5 285 aa14.7□□□□□ -0.06
RAB3IP-201ENST00000247833 GPAA1O43292 621 aa14.69□□□□□ -0.06
RAB3IP-201ENST00000247833 NAA16Q6N069 864 aaPredicted RBP14.69□□□□□ -0.06
RAB3IP-201ENST00000247833 ZSCAN25Q6NSZ9 544 aa14.69□□□□□ -0.06
RAB3IP-201ENST00000247833 TBC1D2BQ9UPU7 963 aa14.69□□□□□ -0.06
RAB3IP-201ENST00000247833 CTAGE5O15320 804 aa14.69□□□□□ -0.06
RAB3IP-201ENST00000247833 NRDCO43847 1150 aa14.69□□□□□ -0.06
RAB3IP-201ENST00000247833 FAM160A1Q05DH4 1040 aa14.69□□□□□ -0.06
RAB3IP-201ENST00000247833 PUS7LQ9H0K6 701 aaKnown RBP14.69□□□□□ -0.06
RAB3IP-201ENST00000247833 BCL2L12Q9HB09 334 aa14.69□□□□□ -0.06
RAB3IP-201ENST00000247833 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.69□□□□□ -0.06
RAB3IP-201ENST00000247833 V9GYY5 206 aaPredicted RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms