RNA–Protein interactions for RNA: ENST00000239944.6

SERP1-201, Transcript of stress associated endoplasmic reticulum protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SERP1, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERP1-201ENST00000239944 ENGASEQ8NFI3 743 aa17.41■□□□□ 0.38
SERP1-201ENST00000239944 TERF2Q15554 542 aa17.4■□□□□ 0.38
SERP1-201ENST00000239944 TNNI3KQ59H18 835 aa17.4■□□□□ 0.38
SERP1-201ENST00000239944 FPGT-TNNI3KV9GXZ4 949 aa17.4■□□□□ 0.38
SERP1-201ENST00000239944 NEURL1BA8MQ27 555 aa17.4■□□□□ 0.38
SERP1-201ENST00000239944 ATP1A3P13637 1013 aa17.4■□□□□ 0.38
SERP1-201ENST00000239944 MRFAP1L1Q96HT8 127 aa17.4■□□□□ 0.38
SERP1-201ENST00000239944 AXIN2Q9Y2T1 843 aa17.4■□□□□ 0.38
SERP1-201ENST00000239944 RCOR1Q9UKL0 485 aa17.4■□□□□ 0.38
SERP1-201ENST00000239944 LMOD1P29536 600 aaPredicted RBP17.39■□□□□ 0.37
SERP1-201ENST00000239944 PTPN12Q05209 780 aaKnown RBP17.39■□□□□ 0.37
SERP1-201ENST00000239944 USPL1Q5W0Q7 1092 aa17.39■□□□□ 0.37
SERP1-201ENST00000239944 RGPD2P0DJD1 1756 aa17.39■□□□□ 0.37
SERP1-201ENST00000239944 VGLL3A8MV65 326 aa17.39■□□□□ 0.37
SERP1-201ENST00000239944 GCKRQ14397 625 aa17.39■□□□□ 0.37
SERP1-201ENST00000239944 SNRKQ9NRH2 765 aa17.39■□□□□ 0.37
SERP1-201ENST00000239944 ZNF397Q8NF99 534 aaPredicted RBP17.38■□□□□ 0.37
SERP1-201ENST00000239944 HMG20BQ9P0W2 317 aa17.38■□□□□ 0.37
SERP1-201ENST00000239944 FANCGO15287 622 aa17.38■□□□□ 0.37
SERP1-201ENST00000239944 SARM1Q6SZW1 724 aa17.38■□□□□ 0.37
SERP1-201ENST00000239944 KRT222Q8N1A0 295 aa17.38■□□□□ 0.37
SERP1-201ENST00000239944 DDX17Q92841 729 aaKnown RBP17.38■□□□□ 0.37
SERP1-201ENST00000239944 N4BP2Q86UW6 1770 aaPredicted RBP17.38■□□□□ 0.37
SERP1-201ENST00000239944 HOXB7P09629 217 aa17.38■□□□□ 0.37
SERP1-201ENST00000239944 FDPSP14324 419 aaKnown RBP17.38■□□□□ 0.37
SERP1-201ENST00000239944 FAM160A1Q05DH4 1040 aa17.38■□□□□ 0.37
SERP1-201ENST00000239944 MCMDC2Q4G0Z9 681 aa17.38■□□□□ 0.37
SERP1-201ENST00000239944 STK11IPQ8N1F8 1099 aa17.38■□□□□ 0.37
SERP1-201ENST00000239944 SMARCC2Q8TAQ2 1214 aa17.38■□□□□ 0.37
SERP1-201ENST00000239944 PPP1R13BQ96KQ4 1090 aa17.38■□□□□ 0.37
SERP1-201ENST00000239944 PLEKHO1Q53GL0 409 aaPredicted RBP17.37■□□□□ 0.37
SERP1-201ENST00000239944 NFATC2IPQ8NCF5 419 aa17.37■□□□□ 0.37
SERP1-201ENST00000239944 ZSCAN16Q9H4T2 348 aaPredicted RBP17.37■□□□□ 0.37
SERP1-201ENST00000239944 MARCKSP29966 332 aaPredicted RBP17.37■□□□□ 0.37
SERP1-201ENST00000239944 CDC25BP30305 580 aa17.37■□□□□ 0.37
SERP1-201ENST00000239944 TSGA10IPQ3SY00 556 aa17.36■□□□□ 0.37
SERP1-201ENST00000239944 CEP57L1Q8IYX8 460 aa17.36■□□□□ 0.37
SERP1-201ENST00000239944 ANO10Q9NW15 660 aa17.36■□□□□ 0.37
SERP1-201ENST00000239944 DENND2AQ9ULE3 1009 aa17.36■□□□□ 0.37
SERP1-201ENST00000239944 PFKFB2O60825 505 aa17.36■□□□□ 0.37
SERP1-201ENST00000239944 SLU7O95391 586 aaKnown RBP17.36■□□□□ 0.37
SERP1-201ENST00000239944 ZNF594Q96JF6 807 aaPredicted RBP17.36■□□□□ 0.37
SERP1-201ENST00000239944 DDX21Q9NR30 783 aaKnown RBP eCLIP17.36■□□□□ 0.37
SERP1-201ENST00000239944 SEC31AO94979 1220 aaKnown RBP17.36■□□□□ 0.37
SERP1-201ENST00000239944 PDIA3P30101 505 aaKnown RBP17.36■□□□□ 0.37
SERP1-201ENST00000239944 FMR1NBQ8N0W7 255 aaPredicted RBP17.36■□□□□ 0.37
SERP1-201ENST00000239944 DPF2Q92785 391 aa17.36■□□□□ 0.37
SERP1-201ENST00000239944 AIFM3Q96NN9 605 aa17.36■□□□□ 0.37
SERP1-201ENST00000239944 C19orf44Q9H6X5 657 aa17.36■□□□□ 0.37
SERP1-201ENST00000239944 ATP5JP18859 108 aa17.35■□□□□ 0.37
SERP1-201ENST00000239944 DHX32Q7L7V1 743 aaKnown RBP17.35■□□□□ 0.37
SERP1-201ENST00000239944 TMEM94Q12767 1356 aa17.35■□□□□ 0.37
SERP1-201ENST00000239944 E7EWF7 191 aa17.35■□□□□ 0.37
SERP1-201ENST00000239944 RXRAP19793 462 aa17.35■□□□□ 0.37
SERP1-201ENST00000239944 RFX5P48382 616 aaPredicted RBP17.35■□□□□ 0.37
SERP1-201ENST00000239944 SYCP1Q15431 976 aa17.35■□□□□ 0.37
SERP1-201ENST00000239944 SF3A1Q15459 793 aaKnown RBP17.35■□□□□ 0.37
SERP1-201ENST00000239944 HOMER1Q86YM7 354 aa17.35■□□□□ 0.37
SERP1-201ENST00000239944 NKX2-3Q8TAU0 364 aa17.35■□□□□ 0.37
SERP1-201ENST00000239944 CCDC85AQ96PX6 553 aaPredicted RBP17.35■□□□□ 0.37
SERP1-201ENST00000239944 POLR3GO15318 223 aaPredicted RBP17.34■□□□□ 0.37
SERP1-201ENST00000239944 ATF3P18847 181 aa17.34■□□□□ 0.37
SERP1-201ENST00000239944 KRT32Q14532 448 aa17.34■□□□□ 0.37
SERP1-201ENST00000239944 ALDH8A1Q9H2A2 487 aaPredicted RBP17.34■□□□□ 0.37
SERP1-201ENST00000239944 DNAI1Q9UI46 699 aa17.34■□□□□ 0.37
SERP1-201ENST00000239944 CLCN6P51797 869 aa17.34■□□□□ 0.37
SERP1-201ENST00000239944 KRT28Q7Z3Y7 464 aa17.34■□□□□ 0.37
SERP1-201ENST00000239944 ERO1AQ96HE7 468 aa17.34■□□□□ 0.37
SERP1-201ENST00000239944 U3KPZ7 1027 aaPredicted RBP17.34■□□□□ 0.37
SERP1-201ENST00000239944 KIF28PB7ZC32 967 aa17.34■□□□□ 0.37
SERP1-201ENST00000239944 DDX58O95786 925 aaKnown RBP17.34■□□□□ 0.37
SERP1-201ENST00000239944 ARHGAP29Q52LW3 1261 aa17.34■□□□□ 0.37
SERP1-201ENST00000239944 LMBR1LQ6UX01 489 aa17.34■□□□□ 0.37
SERP1-201ENST00000239944 BBXQ8WY36 941 aaPredicted RBP17.34■□□□□ 0.37
SERP1-201ENST00000239944 ZNF496Q96IT1 587 aaPredicted RBP17.34■□□□□ 0.37
SERP1-201ENST00000239944 ZCCHC17Q9NP64 241 aaKnown RBP17.34■□□□□ 0.37
SERP1-201ENST00000239944 NEXNQ0ZGT2 675 aa17.33■□□□□ 0.37
SERP1-201ENST00000239944 ANKRD24Q8TF21 1146 aa17.33■□□□□ 0.37
SERP1-201ENST00000239944 MRPS27Q92552 414 aaKnown RBP17.33■□□□□ 0.37
SERP1-201ENST00000239944 NEDD4P46934 1319 aa17.33■□□□□ 0.36
SERP1-201ENST00000239944 A0A087WZG4 1122 aa17.33■□□□□ 0.36
SERP1-201ENST00000239944 UBE2Q2LH0YL09 131 aa17.33■□□□□ 0.36
SERP1-201ENST00000239944 MARF1Q9Y4F3 1742 aaKnown RBP17.33■□□□□ 0.36
SERP1-201ENST00000239944 HSPD1P10809 573 aaKnown RBP17.32■□□□□ 0.36
SERP1-201ENST00000239944 ZC3H6P61129 1189 aaKnown RBP17.32■□□□□ 0.36
SERP1-201ENST00000239944 STK38Q15208 465 aa17.32■□□□□ 0.36
SERP1-201ENST00000239944 KIAA1468Q9P260 1216 aa17.32■□□□□ 0.36
SERP1-201ENST00000239944 JCADQ9P266 1359 aa17.32■□□□□ 0.36
SERP1-201ENST00000239944 TMEM232C9JQI7 657 aa17.32■□□□□ 0.36
SERP1-201ENST00000239944 GABPB1Q06547 395 aaPredicted RBP17.32■□□□□ 0.36
SERP1-201ENST00000239944 CARMIL3Q8ND23 1372 aa17.32■□□□□ 0.36
SERP1-201ENST00000239944 ZNF790Q6PG37 636 aa17.32■□□□□ 0.36
SERP1-201ENST00000239944 ANKRD13DQ6ZTN6 518 aa17.32■□□□□ 0.36
SERP1-201ENST00000239944 UTYO14607 1347 aa17.32■□□□□ 0.36
SERP1-201ENST00000239944 M0R2C6 588 aa17.31■□□□□ 0.36
SERP1-201ENST00000239944 EXOSC10Q01780 885 aaKnown RBP17.31■□□□□ 0.36
SERP1-201ENST00000239944 HAUS7Q99871 368 aa17.31■□□□□ 0.36
SERP1-201ENST00000239944 FHOD1Q9Y613 1164 aa17.31■□□□□ 0.36
SERP1-201ENST00000239944 SFPQP23246 707 aaKnown RBP eCLIP17.31■□□□□ 0.36
SERP1-201ENST00000239944 LRRC24Q50LG9 513 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms