RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 CRY2Q49AN0 593 aa18.35■□□□□ 0.53
HDHD3-201ENST00000238379 ERICH6Q7L0X2 663 aa18.35■□□□□ 0.53
HDHD3-201ENST00000238379 ZNF589Q86UQ0 364 aaPredicted RBP18.35■□□□□ 0.53
HDHD3-201ENST00000238379 HSCBQ8IWL3 235 aa18.35■□□□□ 0.53
HDHD3-201ENST00000238379 UBE4AQ14139 1066 aa18.34■□□□□ 0.53
HDHD3-201ENST00000238379 MAP4K1Q92918 833 aa18.34■□□□□ 0.53
HDHD3-201ENST00000238379 A0A1B0GUL6 1792 aa18.34■□□□□ 0.53
HDHD3-201ENST00000238379 MCMDC2Q4G0Z9 681 aa18.33■□□□□ 0.53
HDHD3-201ENST00000238379 SEC62Q99442 399 aaKnown RBP18.33■□□□□ 0.53
HDHD3-201ENST00000238379 WTIPA6NIX2 430 aaPredicted RBP18.33■□□□□ 0.52
HDHD3-201ENST00000238379 RNF113AO15541 343 aaKnown RBP18.33■□□□□ 0.52
HDHD3-201ENST00000238379 CYP2E1P05181 493 aaPredicted RBP18.33■□□□□ 0.52
HDHD3-201ENST00000238379 ZMYM1Q5SVZ6 1142 aa18.33■□□□□ 0.52
HDHD3-201ENST00000238379 HELLSQ9NRZ9 838 aa18.33■□□□□ 0.52
HDHD3-201ENST00000238379 HMG20BQ9P0W2 317 aa18.33■□□□□ 0.52
HDHD3-201ENST00000238379 BCAMP50895 628 aa18.32■□□□□ 0.52
HDHD3-201ENST00000238379 GRAPQ13588 217 aa18.32■□□□□ 0.52
HDHD3-201ENST00000238379 NECTIN1Q15223 517 aa18.32■□□□□ 0.52
HDHD3-201ENST00000238379 SLFNL1Q499Z3 407 aa18.32■□□□□ 0.52
HDHD3-201ENST00000238379 GRAPLQ8TC17 118 aaPredicted RBP18.32■□□□□ 0.52
HDHD3-201ENST00000238379 ANO8Q9HCE9 1232 aaPredicted RBP18.32■□□□□ 0.52
HDHD3-201ENST00000238379 KLRG2A4D1S0 409 aaPredicted RBP18.31■□□□□ 0.52
HDHD3-201ENST00000238379 RASGRF1Q13972 1273 aa18.31■□□□□ 0.52
HDHD3-201ENST00000238379 RASEFQ8IZ41 740 aa18.31■□□□□ 0.52
HDHD3-201ENST00000238379 KCNB2Q92953 911 aa18.31■□□□□ 0.52
HDHD3-201ENST00000238379 ANKRD2Q9GZV1 360 aa18.31■□□□□ 0.52
HDHD3-201ENST00000238379 SNX14Q9Y5W7 946 aa18.31■□□□□ 0.52
HDHD3-201ENST00000238379 ZFYP08048 801 aaPredicted RBP18.3■□□□□ 0.52
HDHD3-201ENST00000238379 TTF1Q15361 905 aaPredicted RBP18.3■□□□□ 0.52
HDHD3-201ENST00000238379 LRRFIP1Q32MZ4 808 aaKnown RBP18.3■□□□□ 0.52
HDHD3-201ENST00000238379 SPATA5Q8NB90 893 aa18.3■□□□□ 0.52
HDHD3-201ENST00000238379 RBM8AQ9Y5S9 174 aaKnown RBP18.3■□□□□ 0.52
HDHD3-201ENST00000238379 ZNF804BA4D1E1 1349 aa18.3■□□□□ 0.52
HDHD3-201ENST00000238379 K7ELQ4 463 aaPredicted RBP18.3■□□□□ 0.52
HDHD3-201ENST00000238379 SLC15A2Q16348 729 aa18.3■□□□□ 0.52
HDHD3-201ENST00000238379 CCDC129Q6ZRS4 1044 aa18.3■□□□□ 0.52
HDHD3-201ENST00000238379 RPGRQ92834 1020 aaKnown RBP18.3■□□□□ 0.52
HDHD3-201ENST00000238379 ST18O60284 1047 aa18.29■□□□□ 0.52
HDHD3-201ENST00000238379 PIH1D3Q9NQM4 214 aaKnown RBP18.29■□□□□ 0.52
HDHD3-201ENST00000238379 NRXN2Q9P2S2 1712 aa18.29■□□□□ 0.52
HDHD3-201ENST00000238379 HOXA10P31260 410 aaPredicted RBP18.28■□□□□ 0.52
HDHD3-201ENST00000238379 NEK4P51957 841 aa18.28■□□□□ 0.52
HDHD3-201ENST00000238379 PRPF40BQ6NWY9 871 aaKnown RBP18.28■□□□□ 0.52
HDHD3-201ENST00000238379 OSBP2Q969R2 916 aa18.28■□□□□ 0.52
HDHD3-201ENST00000238379 MAST3O60307 1309 aa18.28■□□□□ 0.52
HDHD3-201ENST00000238379 MMP10P09238 476 aa18.28■□□□□ 0.52
HDHD3-201ENST00000238379 GYG1P46976 350 aa18.28■□□□□ 0.52
HDHD3-201ENST00000238379 KCNJ4P48050 445 aa18.27■□□□□ 0.52
HDHD3-201ENST00000238379 CREB3L3Q68CJ9 461 aa18.27■□□□□ 0.52
HDHD3-201ENST00000238379 RBM17Q96I25 401 aaKnown RBP18.27■□□□□ 0.52
HDHD3-201ENST00000238379 FAM84BQ96KN1 310 aaPredicted RBP18.27■□□□□ 0.52
HDHD3-201ENST00000238379 BRIP1Q9BX63 1249 aa18.27■□□□□ 0.52
HDHD3-201ENST00000238379 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.27■□□□□ 0.52
HDHD3-201ENST00000238379 STK32BQ9NY57 414 aa18.27■□□□□ 0.52
HDHD3-201ENST00000238379 SLC27A2O14975 620 aa18.26■□□□□ 0.51
HDHD3-201ENST00000238379 ADD2P35612 726 aa18.26■□□□□ 0.51
HDHD3-201ENST00000238379 CAVIN4Q5BKX8 364 aa18.26■□□□□ 0.51
HDHD3-201ENST00000238379 ZSCAN25Q6NSZ9 544 aa18.26■□□□□ 0.51
HDHD3-201ENST00000238379 APPBP2Q92624 585 aa18.26■□□□□ 0.51
HDHD3-201ENST00000238379 M0R2C6 588 aa18.26■□□□□ 0.51
HDHD3-201ENST00000238379 KLRK1P26718 216 aa18.26■□□□□ 0.51
HDHD3-201ENST00000238379 BAG6P46379 1132 aa18.26■□□□□ 0.51
HDHD3-201ENST00000238379 SF3B2Q13435 895 aaKnown RBP18.26■□□□□ 0.51
HDHD3-201ENST00000238379 FBXO33Q7Z6M2 555 aa18.26■□□□□ 0.51
HDHD3-201ENST00000238379 SLC51AQ86UW1 340 aa18.26■□□□□ 0.51
HDHD3-201ENST00000238379 SPRYD3Q8NCJ5 442 aa18.26■□□□□ 0.51
HDHD3-201ENST00000238379 IL27Q8NEV9 243 aa18.26■□□□□ 0.51
HDHD3-201ENST00000238379 CRAMP1Q96RY5 1269 aa18.26■□□□□ 0.51
HDHD3-201ENST00000238379 UPF3BQ9BZI7 483 aaKnown RBP18.26■□□□□ 0.51
HDHD3-201ENST00000238379 PARP3Q9Y6F1 533 aa18.26■□□□□ 0.51
HDHD3-201ENST00000238379 IDH1O75874 414 aaKnown RBP18.25■□□□□ 0.51
HDHD3-201ENST00000238379 ZKSCAN1P17029 563 aaPredicted RBP18.25■□□□□ 0.51
HDHD3-201ENST00000238379 WASHC4Q2M389 1173 aa18.25■□□□□ 0.51
HDHD3-201ENST00000238379 SLC9C2Q5TAH2 1124 aa18.25■□□□□ 0.51
HDHD3-201ENST00000238379 MSL1Q68DK7 614 aa18.25■□□□□ 0.51
HDHD3-201ENST00000238379 DEFB132Q7Z7B7 95 aa18.25■□□□□ 0.51
HDHD3-201ENST00000238379 SLKQ9H2G2 1235 aaPredicted RBP18.25■□□□□ 0.51
HDHD3-201ENST00000238379 GNL3LQ9NVN8 582 aaKnown RBP18.25■□□□□ 0.51
HDHD3-201ENST00000238379 U3KPZ7 1027 aaPredicted RBP18.25■□□□□ 0.51
HDHD3-201ENST00000238379 ANKRD31Q8N7Z5 1873 aa18.25■□□□□ 0.51
HDHD3-201ENST00000238379 MYH7P12883 1935 aa18.25■□□□□ 0.51
HDHD3-201ENST00000238379 IRS2Q9Y4H2 1338 aa18.25■□□□□ 0.51
HDHD3-201ENST00000238379 BBOX1O75936 387 aa18.24■□□□□ 0.51
HDHD3-201ENST00000238379 UBE3CQ15386 1083 aa18.24■□□□□ 0.51
HDHD3-201ENST00000238379 VPS53Q5VIR6 699 aa18.24■□□□□ 0.51
HDHD3-201ENST00000238379 DSCC1Q9BVC3 393 aa18.24■□□□□ 0.51
HDHD3-201ENST00000238379 PUS7LQ9H0K6 701 aaKnown RBP18.24■□□□□ 0.51
HDHD3-201ENST00000238379 ADCK5Q3MIX3 580 aa18.23■□□□□ 0.51
HDHD3-201ENST00000238379 TSGA10IPQ3SY00 556 aa18.23■□□□□ 0.51
HDHD3-201ENST00000238379 RNF20Q5VTR2 975 aa18.23■□□□□ 0.51
HDHD3-201ENST00000238379 TM6SF1Q9BZW5 370 aa18.23■□□□□ 0.51
HDHD3-201ENST00000238379 IQSEC3Q9UPP2 1182 aaPredicted RBP18.23■□□□□ 0.51
HDHD3-201ENST00000238379 LEMD3Q9Y2U8 911 aa18.23■□□□□ 0.51
HDHD3-201ENST00000238379 MYO5AQ9Y4I1 1855 aaKnown RBP18.23■□□□□ 0.51
HDHD3-201ENST00000238379 XDHP47989 1333 aa18.23■□□□□ 0.51
HDHD3-201ENST00000238379 QSER1Q2KHR3 1735 aa18.23■□□□□ 0.51
HDHD3-201ENST00000238379 TCRBV5S4A2TA0A5A2 114 aa18.23■□□□□ 0.51
HDHD3-201ENST00000238379 HSPD1P10809 573 aaKnown RBP18.23■□□□□ 0.51
HDHD3-201ENST00000238379 PDE6AP16499 860 aa18.23■□□□□ 0.51
HDHD3-201ENST00000238379 VPS37DQ86XT2 251 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms