RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 TTC16Q8NEE8 873 aa13.12□□□□□ -0.31
LAMA4-201ENST00000230538 FAM200AQ8TCP9 573 aa13.12□□□□□ -0.31
LAMA4-201ENST00000230538 ATP6V1AP38606 617 aa13.12□□□□□ -0.31
LAMA4-201ENST00000230538 ZCRB1Q8TBF4 217 aaKnown RBP13.12□□□□□ -0.31
LAMA4-201ENST00000230538 CCDC186Q7Z3E2 898 aa13.12□□□□□ -0.31
LAMA4-201ENST00000230538 FBF1Q8TES7 1133 aa13.12□□□□□ -0.31
LAMA4-201ENST00000230538 PPIP5K1Q6PFW1 1433 aa13.12□□□□□ -0.31
LAMA4-201ENST00000230538 SYT1P21579 422 aa13.12□□□□□ -0.31
LAMA4-201ENST00000230538 IL15P40933 162 aaPredicted RBP13.12□□□□□ -0.31
LAMA4-201ENST00000230538 DACT1Q9NYF0 836 aa13.12□□□□□ -0.31
LAMA4-201ENST00000230538 RTL9Q8NET4 1388 aa13.12□□□□□ -0.31
LAMA4-201ENST00000230538 TMEM110-MUSTN1A8MSY1 372 aa13.12□□□□□ -0.31
LAMA4-201ENST00000230538 KIF4AO95239 1232 aa13.12□□□□□ -0.31
LAMA4-201ENST00000230538 XRCC6P12956 609 aaKnown RBP eCLIP13.12□□□□□ -0.31
LAMA4-201ENST00000230538 PAG1Q9NWQ8 432 aa13.12□□□□□ -0.31
LAMA4-201ENST00000230538 CTAGE9A4FU28 777 aa13.11□□□□□ -0.31
LAMA4-201ENST00000230538 ATP8B2P98198 1209 aa13.11□□□□□ -0.31
LAMA4-201ENST00000230538 C6orf50Q9HD87 102 aa13.11□□□□□ -0.31
LAMA4-201ENST00000230538 ARFGAP3Q9NP61 516 aa13.11□□□□□ -0.31
LAMA4-201ENST00000230538 ALDH1L1O75891 902 aa13.11□□□□□ -0.31
LAMA4-201ENST00000230538 GSTA5Q7RTV2 222 aa13.11□□□□□ -0.31
LAMA4-201ENST00000230538 ZNF804AQ7Z570 1209 aa13.11□□□□□ -0.31
LAMA4-201ENST00000230538 FANCAO15360 1455 aa13.11□□□□□ -0.31
LAMA4-201ENST00000230538 CA8P35219 290 aa13.11□□□□□ -0.31
LAMA4-201ENST00000230538 MXRA7P84157 204 aa13.11□□□□□ -0.31
LAMA4-201ENST00000230538 LMBR1LQ6UX01 489 aa13.11□□□□□ -0.31
LAMA4-201ENST00000230538 ANKRD44Q8N8A2 993 aa13.11□□□□□ -0.31
LAMA4-201ENST00000230538 HSPA4P34932 840 aa13.11□□□□□ -0.31
LAMA4-201ENST00000230538 KRT2P35908 639 aa13.11□□□□□ -0.31
LAMA4-201ENST00000230538 GJC1P36383 396 aa13.11□□□□□ -0.31
LAMA4-201ENST00000230538 KRT222Q8N1A0 295 aa13.11□□□□□ -0.31
LAMA4-201ENST00000230538 PA2G4Q9UQ80 394 aaKnown RBP13.11□□□□□ -0.31
LAMA4-201ENST00000230538 LMBR1Q8WVP7 490 aa13.11□□□□□ -0.31
LAMA4-201ENST00000230538 MRPS9P82933 396 aaKnown RBP13.1□□□□□ -0.31
LAMA4-201ENST00000230538 ARID5AQ03989 594 aa13.1□□□□□ -0.31
LAMA4-201ENST00000230538 SPATA24Q86W54 205 aa13.1□□□□□ -0.31
LAMA4-201ENST00000230538 RRP36Q96EU6 259 aaKnown RBP13.1□□□□□ -0.31
LAMA4-201ENST00000230538 ACSBG1Q96GR2 724 aa13.1□□□□□ -0.31
LAMA4-201ENST00000230538 IMPG2Q9BZV3 1241 aa13.1□□□□□ -0.31
LAMA4-201ENST00000230538 TRIM75PA6NK02 468 aa13.1□□□□□ -0.31
LAMA4-201ENST00000230538 PRIM1P49642 420 aaKnown RBP13.1□□□□□ -0.31
LAMA4-201ENST00000230538 KRT83P78385 493 aa13.1□□□□□ -0.31
LAMA4-201ENST00000230538 KSR2Q6VAB6 950 aa13.1□□□□□ -0.31
LAMA4-201ENST00000230538 CHST3Q7LGC8 479 aa13.1□□□□□ -0.31
LAMA4-201ENST00000230538 NLRP3Q96P20 1036 aa13.1□□□□□ -0.31
LAMA4-201ENST00000230538 PUS7Q96PZ0 661 aaKnown RBP13.1□□□□□ -0.31
LAMA4-201ENST00000230538 CCDC77Q9BR77 488 aa13.1□□□□□ -0.31
LAMA4-201ENST00000230538 ITSN2Q9NZM3 1697 aa13.1□□□□□ -0.31
LAMA4-201ENST00000230538 SPTLC2O15270 562 aa13.1□□□□□ -0.31
LAMA4-201ENST00000230538 OPA1O60313 960 aa13.1□□□□□ -0.31
LAMA4-201ENST00000230538 SLC39A6Q13433 755 aa13.1□□□□□ -0.31
LAMA4-201ENST00000230538 SNX21Q969T3 373 aa13.1□□□□□ -0.31
LAMA4-201ENST00000230538 STMN4Q9H169 189 aaPredicted RBP13.1□□□□□ -0.31
LAMA4-201ENST00000230538 MAPKBP1O60336 1514 aa13.1□□□□□ -0.31
LAMA4-201ENST00000230538 EEF2P13639 858 aaKnown RBP13.1□□□□□ -0.31
LAMA4-201ENST00000230538 ARL1P40616 181 aaPredicted RBP13.09□□□□□ -0.31
LAMA4-201ENST00000230538 GPATCH11Q8N954 259 aa13.09□□□□□ -0.31
LAMA4-201ENST00000230538 SBNO2Q9Y2G9 1366 aa13.09□□□□□ -0.31
LAMA4-201ENST00000230538 GNAT2P19087 354 aa13.09□□□□□ -0.31
LAMA4-201ENST00000230538 OTUD6BQ8N6M0 293 aa13.09□□□□□ -0.31
LAMA4-201ENST00000230538 IPO4Q8TEX9 1081 aaKnown RBP13.09□□□□□ -0.31
LAMA4-201ENST00000230538 ZBTB9Q96C00 473 aa13.09□□□□□ -0.31
LAMA4-201ENST00000230538 MCM6Q14566 821 aa13.09□□□□□ -0.31
LAMA4-201ENST00000230538 AKAP4Q5JQC9 854 aa13.09□□□□□ -0.31
LAMA4-201ENST00000230538 BICDL2A1A5D9 508 aa13.09□□□□□ -0.31
LAMA4-201ENST00000230538 FAM13AO94988 1023 aa13.09□□□□□ -0.31
LAMA4-201ENST00000230538 NIP7Q9Y221 180 aaKnown RBP eCLIP13.09□□□□□ -0.31
LAMA4-201ENST00000230538 CALML3P27482 149 aa13.09□□□□□ -0.31
LAMA4-201ENST00000230538 SPDYE3A6NKU9 549 aa13.08□□□□□ -0.31
LAMA4-201ENST00000230538 KIF5AQ12840 1032 aa13.08□□□□□ -0.31
LAMA4-201ENST00000230538 KRT79Q5XKE5 535 aa13.08□□□□□ -0.31
LAMA4-201ENST00000230538 CCDC50Q8IVM0 306 aa13.08□□□□□ -0.31
LAMA4-201ENST00000230538 GOLGA1Q92805 767 aa13.08□□□□□ -0.31
LAMA4-201ENST00000230538 LAMC3Q9Y6N6 1575 aa13.08□□□□□ -0.32
LAMA4-201ENST00000230538 AK2P54819 239 aa13.08□□□□□ -0.32
LAMA4-201ENST00000230538 UBXN1Q04323 297 aa13.08□□□□□ -0.32
LAMA4-201ENST00000230538 OGFOD1Q8N543 542 aa13.08□□□□□ -0.32
LAMA4-201ENST00000230538 KDM5BQ9UGL1 1544 aa13.08□□□□□ -0.32
LAMA4-201ENST00000230538 KRT86O43790 486 aa13.08□□□□□ -0.32
LAMA4-201ENST00000230538 TERF1P54274 439 aa13.08□□□□□ -0.32
LAMA4-201ENST00000230538 CADPS2Q86UW7 1296 aa13.08□□□□□ -0.32
LAMA4-201ENST00000230538 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.08□□□□□ -0.32
LAMA4-201ENST00000230538 V9GYY5 206 aaPredicted RBP13.08□□□□□ -0.32
LAMA4-201ENST00000230538 ATP2A1O14983 1001 aa13.08□□□□□ -0.32
LAMA4-201ENST00000230538 RNF113AO15541 343 aaKnown RBP13.08□□□□□ -0.32
LAMA4-201ENST00000230538 APOBRQ0VD83 1088 aa13.08□□□□□ -0.32
LAMA4-201ENST00000230538 NEK11Q8NG66 645 aa13.08□□□□□ -0.32
LAMA4-201ENST00000230538 DENND4BO75064 1496 aaPredicted RBP13.08□□□□□ -0.32
LAMA4-201ENST00000230538 CCDC6Q16204 474 aa13.08□□□□□ -0.32
LAMA4-201ENST00000230538 CCDC129Q6ZRS4 1044 aa13.08□□□□□ -0.32
LAMA4-201ENST00000230538 CCDC63Q8NA47 563 aa13.08□□□□□ -0.32
LAMA4-201ENST00000230538 DDX23Q9BUQ8 820 aaKnown RBP13.08□□□□□ -0.32
LAMA4-201ENST00000230538 TYRO3Q06418 890 aa13.07□□□□□ -0.32
LAMA4-201ENST00000230538 DPH6Q7L8W6 267 aa13.07□□□□□ -0.32
LAMA4-201ENST00000230538 TCHPQ9BT92 498 aa13.07□□□□□ -0.32
LAMA4-201ENST00000230538 RAPGEF6Q8TEU7 1601 aa13.07□□□□□ -0.32
LAMA4-201ENST00000230538 LMOD1P29536 600 aaPredicted RBP13.07□□□□□ -0.32
LAMA4-201ENST00000230538 MCM7P33993 719 aa13.07□□□□□ -0.32
LAMA4-201ENST00000230538 MAGEB6Q8N7X4 407 aa13.07□□□□□ -0.32
LAMA4-201ENST00000230538 CAPZA3Q96KX2 299 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms