RNA–Protein interactions for RNA: ENST00000223127.7

PLOD3-201, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PLOD3, Length 2,920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-201ENST00000223127 PDE8AO60658 829 aa15.53■□□□□ 0.08
PLOD3-201ENST00000223127 IFIT1P09914 478 aaKnown RBP15.52■□□□□ 0.08
PLOD3-201ENST00000223127 CCDC129Q6ZRS4 1044 aa15.52■□□□□ 0.08
PLOD3-201ENST00000223127 GPR108Q9NPR9 543 aa15.52■□□□□ 0.08
PLOD3-201ENST00000223127 RBM8AQ9Y5S9 174 aaKnown RBP15.52■□□□□ 0.08
PLOD3-201ENST00000223127 AFF2P51816 1311 aa15.52■□□□□ 0.07
PLOD3-201ENST00000223127 SH3TC1Q8TE82 1336 aa15.52■□□□□ 0.07
PLOD3-201ENST00000223127 FKBP4Q02790 459 aaKnown RBP eCLIP15.52■□□□□ 0.07
PLOD3-201ENST00000223127 BICDL1Q6ZP65 573 aa15.52■□□□□ 0.07
PLOD3-201ENST00000223127 XAGE2Q96GT9 111 aa15.52■□□□□ 0.07
PLOD3-201ENST00000223127 MYH14Q7Z406 1995 aaKnown RBP15.52■□□□□ 0.07
PLOD3-201ENST00000223127 ZNF609O15014 1411 aa15.51■□□□□ 0.07
PLOD3-201ENST00000223127 ADCK5Q3MIX3 580 aa15.51■□□□□ 0.07
PLOD3-201ENST00000223127 GJD4Q96KN9 370 aaPredicted RBP15.51■□□□□ 0.07
PLOD3-201ENST00000223127 UTP14AQ9BVJ6 771 aaKnown RBP15.51■□□□□ 0.07
PLOD3-201ENST00000223127 BCL2L12Q9HB09 334 aa15.51■□□□□ 0.07
PLOD3-201ENST00000223127 PAG1Q9NWQ8 432 aa15.51■□□□□ 0.07
PLOD3-201ENST00000223127 CNPY2Q9Y2B0 182 aa15.51■□□□□ 0.07
PLOD3-201ENST00000223127 NUP98P52948 1817 aa15.51■□□□□ 0.07
PLOD3-201ENST00000223127 EP400Q96L91 3159 aa15.51■□□□□ 0.07
PLOD3-201ENST00000223127 EPB41L2O43491 1005 aaKnown RBP15.51■□□□□ 0.07
PLOD3-201ENST00000223127 CASTP20810 708 aaKnown RBP15.51■□□□□ 0.07
PLOD3-201ENST00000223127 ATP2B3Q16720 1220 aa15.51■□□□□ 0.07
PLOD3-201ENST00000223127 KIF3AQ9Y496 699 aa15.51■□□□□ 0.07
PLOD3-201ENST00000223127 CBX1P83916 185 aa15.5■□□□□ 0.07
PLOD3-201ENST00000223127 HELBQ8NG08 1087 aaPredicted RBP15.5■□□□□ 0.07
PLOD3-201ENST00000223127 JAKMIP1Q96N16 626 aaKnown RBP15.5■□□□□ 0.07
PLOD3-201ENST00000223127 TTC39AQ5SRH9 613 aa15.5■□□□□ 0.07
PLOD3-201ENST00000223127 AKAP2Q9Y2D5 859 aa15.5■□□□□ 0.07
PLOD3-201ENST00000223127 RIPOR2Q9Y4F9 1068 aa15.5■□□□□ 0.07
PLOD3-201ENST00000223127 CCDC158Q5M9N0 1113 aa15.5■□□□□ 0.07
PLOD3-201ENST00000223127 PPP4R3BQ5MIZ7 849 aa15.5■□□□□ 0.07
PLOD3-201ENST00000223127 KBTBD3Q8NAB2 608 aa15.5■□□□□ 0.07
PLOD3-201ENST00000223127 SEC31BQ9NQW1 1179 aa15.5■□□□□ 0.07
PLOD3-201ENST00000223127 MAP4K1Q92918 833 aa15.49■□□□□ 0.07
PLOD3-201ENST00000223127 SCARF1Q14162 830 aa15.49■□□□□ 0.07
PLOD3-201ENST00000223127 NECTIN1Q15223 517 aa15.49■□□□□ 0.07
PLOD3-201ENST00000223127 CREB3L3Q68CJ9 461 aa15.49■□□□□ 0.07
PLOD3-201ENST00000223127 PI16Q6UXB8 463 aa15.49■□□□□ 0.07
PLOD3-201ENST00000223127 FUCA2Q9BTY2 467 aa15.49■□□□□ 0.07
PLOD3-201ENST00000223127 KCNF1Q9H3M0 494 aa15.49■□□□□ 0.07
PLOD3-201ENST00000223127 KDM4AO75164 1064 aa15.48■□□□□ 0.07
PLOD3-201ENST00000223127 ZKSCAN1P17029 563 aaPredicted RBP15.48■□□□□ 0.07
PLOD3-201ENST00000223127 TPRNQ4KMQ1 711 aa15.48■□□□□ 0.07
PLOD3-201ENST00000223127 TAF6LQ9Y6J9 622 aa15.48■□□□□ 0.07
PLOD3-201ENST00000223127 SNAP23O00161 211 aa15.48■□□□□ 0.07
PLOD3-201ENST00000223127 AP5Z1O43299 807 aa15.48■□□□□ 0.07
PLOD3-201ENST00000223127 PODXL2Q9NZ53 605 aa15.48■□□□□ 0.07
PLOD3-201ENST00000223127 FBXO3Q9UK99 471 aa15.48■□□□□ 0.07
PLOD3-201ENST00000223127 PYCARDQ9ULZ3 195 aa15.48■□□□□ 0.07
PLOD3-201ENST00000223127 MED23Q9ULK4 1368 aa15.48■□□□□ 0.07
PLOD3-201ENST00000223127 TAF5LO75529 589 aa15.47■□□□□ 0.07
PLOD3-201ENST00000223127 AK2P54819 239 aa15.47■□□□□ 0.07
PLOD3-201ENST00000223127 COL9A3Q14050 684 aaPredicted RBP15.47■□□□□ 0.07
PLOD3-201ENST00000223127 CCNL1Q9UK58 526 aaPredicted RBP15.47■□□□□ 0.07
PLOD3-201ENST00000223127 ZNF652Q9Y2D9 606 aa15.47■□□□□ 0.07
PLOD3-201ENST00000223127 SLC27A2O14975 620 aa15.47■□□□□ 0.07
PLOD3-201ENST00000223127 GNPATO15228 680 aa15.47■□□□□ 0.07
PLOD3-201ENST00000223127 UBE2HP62256 183 aa15.47■□□□□ 0.07
PLOD3-201ENST00000223127 PARP10Q53GL7 1025 aa15.47■□□□□ 0.07
PLOD3-201ENST00000223127 RIC1Q4ADV7 1423 aa15.47■□□□□ 0.07
PLOD3-201ENST00000223127 DTNBO60941 627 aa15.47■□□□□ 0.07
PLOD3-201ENST00000223127 NTSR2O95665 410 aa15.47■□□□□ 0.07
PLOD3-201ENST00000223127 ZSCAN22P10073 491 aaPredicted RBP15.47■□□□□ 0.07
PLOD3-201ENST00000223127 SEPT12Q8IYM1 358 aa15.47■□□□□ 0.07
PLOD3-201ENST00000223127 KIAA1524Q8TCG1 905 aa15.47■□□□□ 0.07
PLOD3-201ENST00000223127 SRP68Q9UHB9 627 aaKnown RBP15.47■□□□□ 0.07
PLOD3-201ENST00000223127 ANKRD36CQ5JPF3 1778 aa15.46■□□□□ 0.07
PLOD3-201ENST00000223127 LETM1O95202 739 aaPredicted RBP15.46■□□□□ 0.07
PLOD3-201ENST00000223127 MCMDC2Q4G0Z9 681 aa15.46■□□□□ 0.07
PLOD3-201ENST00000223127 TCEANC2Q96MN5 208 aa15.46■□□□□ 0.07
PLOD3-201ENST00000223127 MPHOSPH8Q99549 860 aa15.46■□□□□ 0.07
PLOD3-201ENST00000223127 RIOK3O14730 519 aaKnown RBP15.45■□□□□ 0.06
PLOD3-201ENST00000223127 FIBPO43427 364 aa15.45■□□□□ 0.06
PLOD3-201ENST00000223127 GTF2E1P29083 439 aaPredicted RBP15.45■□□□□ 0.06
PLOD3-201ENST00000223127 ZAP70P43403 619 aa15.45■□□□□ 0.06
PLOD3-201ENST00000223127 GTPBP4Q9BZE4 634 aaKnown RBP15.45■□□□□ 0.06
PLOD3-201ENST00000223127 PDE8BO95263 885 aa15.45■□□□□ 0.06
PLOD3-201ENST00000223127 USPL1Q5W0Q7 1092 aa15.45■□□□□ 0.06
PLOD3-201ENST00000223127 GIMAP6Q6P9H5 292 aa15.45■□□□□ 0.06
PLOD3-201ENST00000223127 CCDC24Q8N4L8 307 aa15.45■□□□□ 0.06
PLOD3-201ENST00000223127 TTC14Q96N46 770 aa15.45■□□□□ 0.06
PLOD3-201ENST00000223127 CYP46A1Q9Y6A2 500 aa15.45■□□□□ 0.06
PLOD3-201ENST00000223127 ERFEQ4G0M1 354 aa15.44■□□□□ 0.06
PLOD3-201ENST00000223127 VPS53Q5VIR6 699 aa15.44■□□□□ 0.06
PLOD3-201ENST00000223127 RUFY3Q7L099 469 aa15.44■□□□□ 0.06
PLOD3-201ENST00000223127 AMIGO3Q86WK7 504 aa15.44■□□□□ 0.06
PLOD3-201ENST00000223127 PDCL2Q8N4E4 241 aa15.44■□□□□ 0.06
PLOD3-201ENST00000223127 ANKRD7Q92527 254 aa15.44■□□□□ 0.06
PLOD3-201ENST00000223127 PDRG1Q9NUG6 133 aa15.44■□□□□ 0.06
PLOD3-201ENST00000223127 PLCB2Q00722 1185 aa15.44■□□□□ 0.06
PLOD3-201ENST00000223127 CCDC152Q4G0S7 254 aa15.44■□□□□ 0.06
PLOD3-201ENST00000223127 RNF20Q5VTR2 975 aa15.44■□□□□ 0.06
PLOD3-201ENST00000223127 TBC1D9BQ66K14 1250 aa15.44■□□□□ 0.06
PLOD3-201ENST00000223127 VGLL2Q8N8G2 317 aa15.44■□□□□ 0.06
PLOD3-201ENST00000223127 TRPC5Q9UL62 973 aaPredicted RBP15.44■□□□□ 0.06
PLOD3-201ENST00000223127 F13A1P00488 732 aa15.44■□□□□ 0.06
PLOD3-201ENST00000223127 QTRT2Q9H974 415 aaKnown RBP15.44■□□□□ 0.06
PLOD3-201ENST00000223127 STX6O43752 255 aa15.43■□□□□ 0.06
PLOD3-201ENST00000223127 SYT1P21579 422 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms