RNA–Protein interactions for RNA: ENST00000216414.12

CDKN3-201, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best)

Gene CDKN3, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-201ENST00000216414 TRIM42Q8IWZ5 723 aa6.11□□□□□ -1.43
CDKN3-201ENST00000216414 GPR152Q8TDT2 470 aa6.11□□□□□ -1.43
CDKN3-201ENST00000216414 C7orf69Q9H7B7 122 aa6.11□□□□□ -1.43
CDKN3-201ENST00000216414 DDX3YO15523 660 aaKnown RBP6.1□□□□□ -1.43
CDKN3-201ENST00000216414 CYP2E1P05181 493 aaPredicted RBP6.1□□□□□ -1.43
CDKN3-201ENST00000216414 EPHA1P21709 976 aa6.1□□□□□ -1.43
CDKN3-201ENST00000216414 TMEM132AQ24JP5 1023 aa6.1□□□□□ -1.43
CDKN3-201ENST00000216414 ADAMTSL4Q6UY14 1074 aa6.1□□□□□ -1.43
CDKN3-201ENST00000216414 NCAPG2Q86XI2 1143 aa6.1□□□□□ -1.43
CDKN3-201ENST00000216414 ZDHHC13Q8IUH4 622 aa6.1□□□□□ -1.43
CDKN3-201ENST00000216414 KLHL23Q8NBE8 558 aa6.1□□□□□ -1.43
CDKN3-201ENST00000216414 UBASH3BQ8TF42 649 aa6.1□□□□□ -1.43
CDKN3-201ENST00000216414 STK32AQ8WU08 396 aa6.1□□□□□ -1.43
CDKN3-201ENST00000216414 COL26A1Q96A83 441 aa6.1□□□□□ -1.43
CDKN3-201ENST00000216414 SH2B1Q9NRF2 756 aaPredicted RBP6.1□□□□□ -1.43
CDKN3-201ENST00000216414 ABI2Q9NYB9 513 aaPredicted RBP6.1□□□□□ -1.43
CDKN3-201ENST00000216414 CXXC1Q9P0U4 656 aaPredicted RBP6.1□□□□□ -1.43
CDKN3-201ENST00000216414 HMX2A2RU54 273 aa6.09□□□□□ -1.43
CDKN3-201ENST00000216414 SART1O43290 800 aaKnown RBP6.09□□□□□ -1.43
CDKN3-201ENST00000216414 KIF4AO95239 1232 aa6.09□□□□□ -1.43
CDKN3-201ENST00000216414 PTPRAP18433 802 aa6.09□□□□□ -1.43
CDKN3-201ENST00000216414 KIAA1211Q6ZU35 1233 aa6.09□□□□□ -1.43
CDKN3-201ENST00000216414 DBNDD2Q9BQY9 259 aa6.09□□□□□ -1.43
CDKN3-201ENST00000216414 KRTAP4-9Q9BYQ8 210 aa6.09□□□□□ -1.43
CDKN3-201ENST00000216414 PBX4Q9BYU1 374 aa6.09□□□□□ -1.43
CDKN3-201ENST00000216414 KCNF1Q9H3M0 494 aa6.09□□□□□ -1.43
CDKN3-201ENST00000216414 ADAM11O75078 769 aa6.08□□□□□ -1.44
CDKN3-201ENST00000216414 FAM69CQ0P6D2 419 aa6.08□□□□□ -1.44
CDKN3-201ENST00000216414 ELOAQ14241 798 aaKnown RBP6.08□□□□□ -1.44
CDKN3-201ENST00000216414 FOXD4L4Q8WXT5 416 aaPredicted RBP6.08□□□□□ -1.44
CDKN3-201ENST00000216414 KLHDC7BQ96G42 594 aa6.08□□□□□ -1.44
CDKN3-201ENST00000216414 FAM46AQ96IP4 442 aaKnown RBP6.08□□□□□ -1.44
CDKN3-201ENST00000216414 MYRFLQ96LU7 910 aa6.08□□□□□ -1.44
CDKN3-201ENST00000216414 SEC31BQ9NQW1 1179 aa6.08□□□□□ -1.44
CDKN3-201ENST00000216414 STIM2Q9P246 746 aa6.08□□□□□ -1.44
CDKN3-201ENST00000216414 KANSL3Q9P2N6 904 aa6.08□□□□□ -1.44
CDKN3-201ENST00000216414 TM4SF5O14894 197 aa6.07□□□□□ -1.44
CDKN3-201ENST00000216414 SPINK2P20155 84 aa6.07□□□□□ -1.44
CDKN3-201ENST00000216414 CABP4P57796 275 aa6.07□□□□□ -1.44
CDKN3-201ENST00000216414 RNF43Q68DV7 783 aa6.07□□□□□ -1.44
CDKN3-201ENST00000216414 DTX1Q86Y01 620 aa6.07□□□□□ -1.44
CDKN3-201ENST00000216414 ABTB2Q8N961 1025 aa6.07□□□□□ -1.44
CDKN3-201ENST00000216414 H3BRJ5 948 aa6.06□□□□□ -1.44
CDKN3-201ENST00000216414 ZBTB39O15060 712 aa6.06□□□□□ -1.44
CDKN3-201ENST00000216414 ADAMTS4O75173 837 aa6.06□□□□□ -1.44
CDKN3-201ENST00000216414 BMP3P12645 472 aa6.06□□□□□ -1.44
CDKN3-201ENST00000216414 NLRP12P59046 1061 aa6.06□□□□□ -1.44
CDKN3-201ENST00000216414 JAG1P78504 1218 aa6.06□□□□□ -1.44
CDKN3-201ENST00000216414 ZNF438Q7Z4V0 828 aa6.06□□□□□ -1.44
CDKN3-201ENST00000216414 FAM20CQ8IXL6 584 aa6.06□□□□□ -1.44
CDKN3-201ENST00000216414 CEP120Q8N960 986 aa6.06□□□□□ -1.44
CDKN3-201ENST00000216414 POP1Q99575 1024 aaKnown RBP6.06□□□□□ -1.44
CDKN3-201ENST00000216414 TMEM63CQ9P1W3 806 aa6.06□□□□□ -1.44
CDKN3-201ENST00000216414 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.05□□□□□ -1.44
CDKN3-201ENST00000216414 PRR19A6NJB7 356 aa6.05□□□□□ -1.44
CDKN3-201ENST00000216414 PREPP48147 710 aa6.05□□□□□ -1.44
CDKN3-201ENST00000216414 TMEM164Q5U3C3 297 aa6.05□□□□□ -1.44
CDKN3-201ENST00000216414 ANKRD34AQ69YU3 496 aa6.05□□□□□ -1.44
CDKN3-201ENST00000216414 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.05□□□□□ -1.44
CDKN3-201ENST00000216414 BEND4Q6ZU67 534 aa6.05□□□□□ -1.44
CDKN3-201ENST00000216414 CLEC10AQ8IUN9 316 aa6.05□□□□□ -1.44
CDKN3-201ENST00000216414 SHKBP1Q8TBC3 707 aa6.05□□□□□ -1.44
CDKN3-201ENST00000216414 SLC7A3Q8WY07 619 aa6.05□□□□□ -1.44
CDKN3-201ENST00000216414 NUDT16Q96DE0 195 aaKnown RBP6.05□□□□□ -1.44
CDKN3-201ENST00000216414 FAM83CQ9BQN1 747 aa6.05□□□□□ -1.44
CDKN3-201ENST00000216414 RUSC1Q9BVN2 902 aa6.05□□□□□ -1.44
CDKN3-201ENST00000216414 ADAM19Q9H013 955 aa6.05□□□□□ -1.44
CDKN3-201ENST00000216414 ELP3Q9H9T3 547 aa6.05□□□□□ -1.44
CDKN3-201ENST00000216414 ADGRE2Q9UHX3 823 aa6.05□□□□□ -1.44
CDKN3-201ENST00000216414 GAS2O43903 313 aaKnown RBP6.04□□□□□ -1.44
CDKN3-201ENST00000216414 ACPPP15309 386 aa6.04□□□□□ -1.44
CDKN3-201ENST00000216414 PIP4K2BP78356 416 aa6.04□□□□□ -1.44
CDKN3-201ENST00000216414 PDE12Q6L8Q7 609 aaKnown RBP6.04□□□□□ -1.44
CDKN3-201ENST00000216414 FDX2Q6P4F2 183 aa6.04□□□□□ -1.44
CDKN3-201ENST00000216414 ZMYND15Q9H091 742 aa6.04□□□□□ -1.44
CDKN3-201ENST00000216414 RNF208Q9H0X6 261 aa6.04□□□□□ -1.44
CDKN3-201ENST00000216414 CNTN3Q9P232 1028 aa6.04□□□□□ -1.44
CDKN3-201ENST00000216414 WDR64B1ANS9 1081 aa6.03□□□□□ -1.44
CDKN3-201ENST00000216414 ATCAYQ86WG3 371 aa6.03□□□□□ -1.44
CDKN3-201ENST00000216414 OSGEPQ9NPF4 335 aa6.03□□□□□ -1.44
CDKN3-201ENST00000216414 TRPA1O75762 1119 aa6.02□□□□□ -1.45
CDKN3-201ENST00000216414 CES1P23141 567 aa6.02□□□□□ -1.45
CDKN3-201ENST00000216414 ARL4DP49703 201 aa6.02□□□□□ -1.45
CDKN3-201ENST00000216414 OGFOD2Q6N063 350 aa6.02□□□□□ -1.45
CDKN3-201ENST00000216414 C1orf127Q8N9H9 656 aa6.02□□□□□ -1.45
CDKN3-201ENST00000216414 WNT8BQ93098 351 aa6.02□□□□□ -1.45
CDKN3-201ENST00000216414 ASIC4Q96FT7 647 aa6.02□□□□□ -1.45
CDKN3-201ENST00000216414 MFSD14AQ96MC6 490 aa6.02□□□□□ -1.45
CDKN3-201ENST00000216414 SALL4Q9UJQ4 1053 aa6.02□□□□□ -1.45
CDKN3-201ENST00000216414 HIF3AQ9Y2N7 669 aa6.02□□□□□ -1.45
CDKN3-201ENST00000216414 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.02□□□□□ -1.45
CDKN3-201ENST00000216414 PDE2AO00408 941 aaPredicted RBP6.01□□□□□ -1.45
CDKN3-201ENST00000216414 ATG7O95352 703 aa6.01□□□□□ -1.45
CDKN3-201ENST00000216414 RXRBP28702 533 aa6.01□□□□□ -1.45
CDKN3-201ENST00000216414 DNM1Q05193 864 aaKnown RBP6.01□□□□□ -1.45
CDKN3-201ENST00000216414 EDEM1Q92611 657 aa6.01□□□□□ -1.45
CDKN3-201ENST00000216414 CLP1Q92989 425 aaKnown RBP6.01□□□□□ -1.45
CDKN3-201ENST00000216414 SEPT3Q9UH03 358 aa6.01□□□□□ -1.45
CDKN3-201ENST00000216414 A6NHS1 94 aa6□□□□□ -1.45
CDKN3-201ENST00000216414 NFKBIEO00221 500 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms