RNA–Protein interactions for RNA: ENST00000216274.9

RIPK3-201, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK3, Length 1,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-201ENST00000216274 CSF1RP07333 972 aa15.32■□□□□ 0.04
RIPK3-201ENST00000216274 DDR1Q08345 913 aa15.32■□□□□ 0.04
RIPK3-201ENST00000216274 KRT32Q14532 448 aa15.32■□□□□ 0.04
RIPK3-201ENST00000216274 TAF7LQ5H9L4 462 aa15.32■□□□□ 0.04
RIPK3-201ENST00000216274 LMBRD1Q9NUN5 540 aa15.32■□□□□ 0.04
RIPK3-201ENST00000216274 U3KPZ7 1027 aaPredicted RBP15.32■□□□□ 0.04
RIPK3-201ENST00000216274 SPEF2Q9C093 1822 aa15.32■□□□□ 0.04
RIPK3-201ENST00000216274 TAF5LO75529 589 aa15.31■□□□□ 0.04
RIPK3-201ENST00000216274 MRE11P49959 708 aa15.31■□□□□ 0.04
RIPK3-201ENST00000216274 ANKRD1Q15327 319 aa15.31■□□□□ 0.04
RIPK3-201ENST00000216274 TSGA10IPQ3SY00 556 aa15.31■□□□□ 0.04
RIPK3-201ENST00000216274 MCMDC2Q4G0Z9 681 aa15.31■□□□□ 0.04
RIPK3-201ENST00000216274 LRRC24Q50LG9 513 aa15.31■□□□□ 0.04
RIPK3-201ENST00000216274 EDC3Q96F86 508 aaKnown RBP15.31■□□□□ 0.04
RIPK3-201ENST00000216274 ALDH8A1Q9H2A2 487 aaPredicted RBP15.31■□□□□ 0.04
RIPK3-201ENST00000216274 NUP98P52948 1817 aa15.31■□□□□ 0.04
RIPK3-201ENST00000216274 CARMIL3Q8ND23 1372 aa15.31■□□□□ 0.04
RIPK3-201ENST00000216274 ANKRD36CQ5JPF3 1778 aa15.31■□□□□ 0.04
RIPK3-201ENST00000216274 SH3TC1Q8TE82 1336 aa15.31■□□□□ 0.04
RIPK3-201ENST00000216274 IFIT5Q13325 482 aaKnown RBP15.31■□□□□ 0.04
RIPK3-201ENST00000216274 ADCK5Q3MIX3 580 aa15.31■□□□□ 0.04
RIPK3-201ENST00000216274 NLRP10Q86W26 655 aa15.31■□□□□ 0.04
RIPK3-201ENST00000216274 ZNF594Q96JF6 807 aaPredicted RBP15.31■□□□□ 0.04
RIPK3-201ENST00000216274 PAG1Q9NWQ8 432 aa15.31■□□□□ 0.04
RIPK3-201ENST00000216274 A0A1B0GUL7 405 aa15.3■□□□□ 0.04
RIPK3-201ENST00000216274 LRRFIP1Q32MZ4 808 aaKnown RBP15.3■□□□□ 0.04
RIPK3-201ENST00000216274 TBC1D9BQ66K14 1250 aa15.3■□□□□ 0.04
RIPK3-201ENST00000216274 BLOC1S2Q6QNY1 142 aa15.3■□□□□ 0.04
RIPK3-201ENST00000216274 ZNF589Q86UQ0 364 aaPredicted RBP15.3■□□□□ 0.04
RIPK3-201ENST00000216274 FAM89AQ96GI7 184 aa15.3■□□□□ 0.04
RIPK3-201ENST00000216274 HELLSQ9NRZ9 838 aa15.3■□□□□ 0.04
RIPK3-201ENST00000216274 SMC3Q9UQE7 1217 aa15.3■□□□□ 0.04
RIPK3-201ENST00000216274 IFIT1P09914 478 aaKnown RBP15.29■□□□□ 0.04
RIPK3-201ENST00000216274 TGFB2P61812 414 aa15.29■□□□□ 0.04
RIPK3-201ENST00000216274 DDX46Q7L014 1031 aaKnown RBP15.29■□□□□ 0.04
RIPK3-201ENST00000216274 KIAA1551Q9HCM1 1747 aa15.29■□□□□ 0.04
RIPK3-201ENST00000216274 TIMM10P62072 90 aa15.29■□□□□ 0.04
RIPK3-201ENST00000216274 HLFQ16534 295 aa15.29■□□□□ 0.04
RIPK3-201ENST00000216274 CCDC158Q5M9N0 1113 aa15.29■□□□□ 0.04
RIPK3-201ENST00000216274 KLHL34Q8N239 644 aa15.29■□□□□ 0.04
RIPK3-201ENST00000216274 SETDB2Q96T68 719 aa15.29■□□□□ 0.04
RIPK3-201ENST00000216274 PUS3Q9BZE2 481 aaKnown RBP15.29■□□□□ 0.04
RIPK3-201ENST00000216274 BRPF3Q9ULD4 1205 aa15.29■□□□□ 0.04
RIPK3-201ENST00000216274 DCAF8L1A6NGE4 600 aa15.28■□□□□ 0.04
RIPK3-201ENST00000216274 GOLIM4O00461 696 aa15.28■□□□□ 0.04
RIPK3-201ENST00000216274 SERPINB2P05120 415 aa15.28■□□□□ 0.04
RIPK3-201ENST00000216274 CPA1P15085 419 aa15.28■□□□□ 0.04
RIPK3-201ENST00000216274 ABCC12Q96J65 1359 aa15.27■□□□□ 0.04
RIPK3-201ENST00000216274 PRPF40AO75400 957 aaKnown RBP15.27■□□□□ 0.04
RIPK3-201ENST00000216274 MBD3O95983 291 aa15.27■□□□□ 0.04
RIPK3-201ENST00000216274 PDIA4P13667 645 aaKnown RBP15.27■□□□□ 0.04
RIPK3-201ENST00000216274 RPS6KB1P23443 525 aa15.27■□□□□ 0.04
RIPK3-201ENST00000216274 CTSWP56202 376 aa15.27■□□□□ 0.04
RIPK3-201ENST00000216274 GORABQ5T7V8 394 aa15.27■□□□□ 0.04
RIPK3-201ENST00000216274 NLGN2Q8NFZ4 835 aa15.27■□□□□ 0.04
RIPK3-201ENST00000216274 ANKRD18BA2A2Z9 1011 aa15.27■□□□□ 0.03
RIPK3-201ENST00000216274 GPTP24298 496 aa15.27■□□□□ 0.03
RIPK3-201ENST00000216274 TTC39AQ5SRH9 613 aa15.27■□□□□ 0.03
RIPK3-201ENST00000216274 FOXD4L5Q5VV16 416 aaPredicted RBP15.27■□□□□ 0.03
RIPK3-201ENST00000216274 FOXD4L4Q8WXT5 416 aaPredicted RBP15.27■□□□□ 0.03
RIPK3-201ENST00000216274 GRPEL1Q9HAV7 217 aa15.27■□□□□ 0.03
RIPK3-201ENST00000216274 NDUFB9Q9Y6M9 179 aa15.27■□□□□ 0.03
RIPK3-201ENST00000216274 IRS4O14654 1257 aaPredicted RBP15.26■□□□□ 0.03
RIPK3-201ENST00000216274 PDE8AO60658 829 aa15.26■□□□□ 0.03
RIPK3-201ENST00000216274 XRCC6P12956 609 aaKnown RBP eCLIP15.26■□□□□ 0.03
RIPK3-201ENST00000216274 NCLP19338 710 aaKnown RBP15.26■□□□□ 0.03
RIPK3-201ENST00000216274 ZMYM1Q5SVZ6 1142 aa15.26■□□□□ 0.03
RIPK3-201ENST00000216274 CCDC83Q8IWF9 413 aa15.26■□□□□ 0.03
RIPK3-201ENST00000216274 TRMT112Q9UI30 125 aaKnown RBP15.26■□□□□ 0.03
RIPK3-201ENST00000216274 BRCA1P38398 1863 aaKnown RBP15.25■□□□□ 0.03
RIPK3-201ENST00000216274 RNF113AO15541 343 aaKnown RBP15.25■□□□□ 0.03
RIPK3-201ENST00000216274 BICDL1Q6ZP65 573 aa15.25■□□□□ 0.03
RIPK3-201ENST00000216274 TTLL11Q8NHH1 800 aa15.25■□□□□ 0.03
RIPK3-201ENST00000216274 DSCC1Q9BVC3 393 aa15.25■□□□□ 0.03
RIPK3-201ENST00000216274 ZFYP08048 801 aaPredicted RBP15.25■□□□□ 0.03
RIPK3-201ENST00000216274 ZSCAN22P10073 491 aaPredicted RBP15.25■□□□□ 0.03
RIPK3-201ENST00000216274 METTL24Q5JXM2 366 aa15.25■□□□□ 0.03
RIPK3-201ENST00000216274 ZNF34Q8IZ26 560 aa15.25■□□□□ 0.03
RIPK3-201ENST00000216274 XAGE2Q96GT9 111 aa15.25■□□□□ 0.03
RIPK3-201ENST00000216274 NIP7Q9Y221 180 aaKnown RBP eCLIP15.25■□□□□ 0.03
RIPK3-201ENST00000216274 ATP6V1DQ9Y5K8 247 aa15.25■□□□□ 0.03
RIPK3-201ENST00000216274 STX6O43752 255 aa15.24■□□□□ 0.03
RIPK3-201ENST00000216274 LARGE1O95461 756 aa15.24■□□□□ 0.03
RIPK3-201ENST00000216274 ITGA6P23229 1130 aa15.24■□□□□ 0.03
RIPK3-201ENST00000216274 ZNF445P59923 1031 aa15.24■□□□□ 0.03
RIPK3-201ENST00000216274 ATP2B3Q16720 1220 aa15.24■□□□□ 0.03
RIPK3-201ENST00000216274 CCDC129Q6ZRS4 1044 aa15.24■□□□□ 0.03
RIPK3-201ENST00000216274 LARP6Q9BRS8 491 aaKnown RBP15.24■□□□□ 0.03
RIPK3-201ENST00000216274 DLEC1Q9Y238 1755 aa15.24■□□□□ 0.03
RIPK3-201ENST00000216274 RIC1Q4ADV7 1423 aa15.24■□□□□ 0.03
RIPK3-201ENST00000216274 MYH3P11055 1940 aa15.24■□□□□ 0.03
RIPK3-201ENST00000216274 HMGB1P09429 215 aaKnown RBP15.23■□□□□ 0.03
RIPK3-201ENST00000216274 GJB2P29033 226 aa15.23■□□□□ 0.03
RIPK3-201ENST00000216274 ME3Q16798 604 aa15.23■□□□□ 0.03
RIPK3-201ENST00000216274 PRR5LQ6MZQ0 368 aa15.23■□□□□ 0.03
RIPK3-201ENST00000216274 CAVIN1Q6NZI2 390 aaKnown RBP15.23■□□□□ 0.03
RIPK3-201ENST00000216274 LDHAL6AQ6ZMR3 332 aa15.23■□□□□ 0.03
RIPK3-201ENST00000216274 CNBD1Q8NA66 436 aa15.23■□□□□ 0.03
RIPK3-201ENST00000216274 CCDC85AQ96PX6 553 aaPredicted RBP15.23■□□□□ 0.03
RIPK3-201ENST00000216274 NEK1Q96PY6 1258 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms