RNA–Protein interactions for RNA: ENST00000181839.8

CDK13-201, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CDK13, Length 7,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-201ENST00000181839 ZKSCAN3Q9BRR0 538 aa20.34■□□□□ 0.85
CDK13-201ENST00000181839 ATAD2Q6PL18 1390 aa20.34■□□□□ 0.85
CDK13-201ENST00000181839 PLVAPQ9BX97 442 aa20.34■□□□□ 0.85
CDK13-201ENST00000181839 PI4KAP2A4QPH2 592 aa20.34■□□□□ 0.85
CDK13-201ENST00000181839 MICALCLQ6ZW33 695 aa20.34■□□□□ 0.85
CDK13-201ENST00000181839 PI4KAP1Q8N8J0 262 aa20.34■□□□□ 0.85
CDK13-201ENST00000181839 NECAB1Q8N987 351 aa20.34■□□□□ 0.85
CDK13-201ENST00000181839 ALG1Q9BT22 464 aa20.34■□□□□ 0.85
CDK13-201ENST00000181839 SELENOOQ9BVL4 669 aa20.34■□□□□ 0.85
CDK13-201ENST00000181839 FBLN1P23142 703 aa20.33■□□□□ 0.85
CDK13-201ENST00000181839 SPDYE16A6NNV3 312 aaPredicted RBP20.33■□□□□ 0.85
CDK13-201ENST00000181839 GMNNO75496 209 aa20.33■□□□□ 0.85
CDK13-201ENST00000181839 SPDYE2Q495Y8 402 aa20.33■□□□□ 0.85
CDK13-201ENST00000181839 PPP4R4Q6NUP7 873 aa20.33■□□□□ 0.85
CDK13-201ENST00000181839 TCIRG1Q13488 830 aa20.33■□□□□ 0.85
CDK13-201ENST00000181839 AFG3L2Q9Y4W6 797 aa20.33■□□□□ 0.85
CDK13-201ENST00000181839 RXRAP19793 462 aa20.33■□□□□ 0.84
CDK13-201ENST00000181839 MSL1Q68DK7 614 aa20.33■□□□□ 0.84
CDK13-201ENST00000181839 SMARCC1Q92922 1105 aaPredicted RBP20.33■□□□□ 0.84
CDK13-201ENST00000181839 CCDC14Q49A88 953 aa20.33■□□□□ 0.84
CDK13-201ENST00000181839 RASAL2Q9UJF2 1139 aa20.33■□□□□ 0.84
CDK13-201ENST00000181839 TCP10Q12799 353 aa20.32■□□□□ 0.84
CDK13-201ENST00000181839 RBM17Q96I25 401 aaKnown RBP20.32■□□□□ 0.84
CDK13-201ENST00000181839 CAPZA3Q96KX2 299 aa20.32■□□□□ 0.84
CDK13-201ENST00000181839 ZBTB43O43298 467 aa20.32■□□□□ 0.84
CDK13-201ENST00000181839 SNRPA1P09661 255 aaKnown RBP20.32■□□□□ 0.84
CDK13-201ENST00000181839 RAPGEF1Q13905 1077 aa20.32■□□□□ 0.84
CDK13-201ENST00000181839 TTC30AQ86WT1 665 aa20.32■□□□□ 0.84
CDK13-201ENST00000181839 NBPF7P0C2Y1 421 aaPredicted RBP20.32■□□□□ 0.84
CDK13-201ENST00000181839 DHX58Q96C10 678 aa20.32■□□□□ 0.84
CDK13-201ENST00000181839 CHPF2Q9P2E5 772 aa20.32■□□□□ 0.84
CDK13-201ENST00000181839 M0QZ92 97 aa20.31■□□□□ 0.84
CDK13-201ENST00000181839 FNBP1Q96RU3 617 aa20.31■□□□□ 0.84
CDK13-201ENST00000181839 KRT23Q9C075 422 aa20.31■□□□□ 0.84
CDK13-201ENST00000181839 MCM5P33992 734 aa20.31■□□□□ 0.84
CDK13-201ENST00000181839 PPARDQ03181 441 aa20.31■□□□□ 0.84
CDK13-201ENST00000181839 BRDTQ58F21 947 aaPredicted RBP20.31■□□□□ 0.84
CDK13-201ENST00000181839 ESR2Q92731 530 aa20.31■□□□□ 0.84
CDK13-201ENST00000181839 PPP1R7Q15435 360 aa20.31■□□□□ 0.84
CDK13-201ENST00000181839 IRAK4Q9NWZ3 460 aa20.31■□□□□ 0.84
CDK13-201ENST00000181839 STX1AQ16623 288 aa20.31■□□□□ 0.84
CDK13-201ENST00000181839 KCNK9Q9NPC2 374 aa20.31■□□□□ 0.84
CDK13-201ENST00000181839 LMTK3Q96Q04 1460 aa20.3■□□□□ 0.84
CDK13-201ENST00000181839 ANKRD13DQ6ZTN6 518 aa20.3■□□□□ 0.84
CDK13-201ENST00000181839 TTC30BQ8N4P2 665 aa20.3■□□□□ 0.84
CDK13-201ENST00000181839 SLC8A3P57103 927 aa20.3■□□□□ 0.84
CDK13-201ENST00000181839 TCEANC2Q96MN5 208 aa20.3■□□□□ 0.84
CDK13-201ENST00000181839 PPP1R9BQ96SB3 815 aa20.3■□□□□ 0.84
CDK13-201ENST00000181839 NCOA2Q15596 1464 aa20.3■□□□□ 0.84
CDK13-201ENST00000181839 USH1GQ495M9 461 aa20.3■□□□□ 0.84
CDK13-201ENST00000181839 TRAPPC3LQ5T215 181 aa20.3■□□□□ 0.84
CDK13-201ENST00000181839 LDHBP07195 334 aaKnown RBP20.3■□□□□ 0.84
CDK13-201ENST00000181839 UQCRFS1P1P0C7P4 283 aa20.3■□□□□ 0.84
CDK13-201ENST00000181839 SMCR8Q8TEV9 937 aaPredicted RBP20.3■□□□□ 0.84
CDK13-201ENST00000181839 SCAND2PQ9GZW5 306 aaPredicted RBP20.3■□□□□ 0.84
CDK13-201ENST00000181839 SYKP43405 635 aa20.3■□□□□ 0.84
CDK13-201ENST00000181839 KRT19P08727 400 aa20.29■□□□□ 0.84
CDK13-201ENST00000181839 SKAP1Q86WV1 359 aa20.29■□□□□ 0.84
CDK13-201ENST00000181839 RPUSD2Q8IZ73 545 aaKnown RBP20.29■□□□□ 0.84
CDK13-201ENST00000181839 PPME1Q9Y570 386 aa20.29■□□□□ 0.84
CDK13-201ENST00000181839 LIMCH1Q9UPQ0 1083 aa20.29■□□□□ 0.84
CDK13-201ENST00000181839 RSPH3Q86UC2 560 aa20.29■□□□□ 0.84
CDK13-201ENST00000181839 SH2B1Q9NRF2 756 aaPredicted RBP20.29■□□□□ 0.84
CDK13-201ENST00000181839 RMND1Q9NWS8 449 aa20.29■□□□□ 0.84
CDK13-201ENST00000181839 USP25Q9UHP3 1055 aa20.29■□□□□ 0.84
CDK13-201ENST00000181839 MSANTD4Q8NCY6 345 aa20.29■□□□□ 0.84
CDK13-201ENST00000181839 SLC9C2Q5TAH2 1124 aa20.29■□□□□ 0.84
CDK13-201ENST00000181839 TPTE2Q6XPS3 522 aa20.29■□□□□ 0.84
CDK13-201ENST00000181839 ATP6V0A2Q9Y487 856 aa20.29■□□□□ 0.84
CDK13-201ENST00000181839 XAGE3Q8WTP9 111 aa20.28■□□□□ 0.84
CDK13-201ENST00000181839 CCDC102BQ68D86 513 aa20.28■□□□□ 0.84
CDK13-201ENST00000181839 CPXCR1Q8N123 301 aa20.28■□□□□ 0.84
CDK13-201ENST00000181839 CACYBPQ9HB71 228 aaKnown RBP20.28■□□□□ 0.84
CDK13-201ENST00000181839 RBM27Q9P2N5 1060 aaKnown RBP20.28■□□□□ 0.84
CDK13-201ENST00000181839 PPP1R12AO14974 1030 aaPredicted RBP20.28■□□□□ 0.84
CDK13-201ENST00000181839 KIF5AQ12840 1032 aa20.28■□□□□ 0.84
CDK13-201ENST00000181839 DIXDC1Q155Q3 683 aa20.28■□□□□ 0.84
CDK13-201ENST00000181839 PAGR1Q9BTK6 254 aa20.28■□□□□ 0.84
CDK13-201ENST00000181839 CCDC89Q8N998 374 aa20.27■□□□□ 0.84
CDK13-201ENST00000181839 TSTA3Q13630 321 aaPredicted RBP20.27■□□□□ 0.84
CDK13-201ENST00000181839 NOC2LQ9Y3T9 749 aaKnown RBP20.27■□□□□ 0.84
CDK13-201ENST00000181839 TRPC3Q13507 836 aa20.27■□□□□ 0.84
CDK13-201ENST00000181839 GTF2F1P35269 517 aaKnown RBP eCLIP20.27■□□□□ 0.84
CDK13-201ENST00000181839 UBASH3AP57075 661 aa20.27■□□□□ 0.84
CDK13-201ENST00000181839 ARHGAP27Q6ZUM4 889 aa20.27■□□□□ 0.84
CDK13-201ENST00000181839 TBC1D31Q96DN5 1066 aa20.27■□□□□ 0.84
CDK13-201ENST00000181839 PSMD6Q15008 389 aa20.27■□□□□ 0.83
CDK13-201ENST00000181839 ATAD2BQ9ULI0 1458 aa20.27■□□□□ 0.83
CDK13-201ENST00000181839 METTL13Q8N6R0 699 aa20.27■□□□□ 0.83
CDK13-201ENST00000181839 CFTRP13569 1480 aa20.26■□□□□ 0.83
CDK13-201ENST00000181839 UFL1O94874 794 aa20.26■□□□□ 0.83
CDK13-201ENST00000181839 KANK3Q6NY19 840 aa20.26■□□□□ 0.83
CDK13-201ENST00000181839 SMC6Q96SB8 1091 aa20.26■□□□□ 0.83
CDK13-201ENST00000181839 FANCIQ9NVI1 1328 aa20.26■□□□□ 0.83
CDK13-201ENST00000181839 WDR44Q5JSH3 913 aa20.26■□□□□ 0.83
CDK13-201ENST00000181839 GNG11P61952 73 aa20.26■□□□□ 0.83
CDK13-201ENST00000181839 SNW1Q13573 536 aaKnown RBP20.26■□□□□ 0.83
CDK13-201ENST00000181839 MED10Q9BTT4 135 aa20.26■□□□□ 0.83
CDK13-201ENST00000181839 HSPA2P54652 639 aa20.25■□□□□ 0.83
CDK13-201ENST00000181839 COPS6Q7L5N1 327 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms