RNA–Protein interactions for RNA: ENST00000175091.4

LAPTM4A-201, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4A, Length 1,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-201ENST00000175091 RNF113AO15541 343 aaKnown RBP18.76■□□□□ 0.59
LAPTM4A-201ENST00000175091 UQCRFS1P1P0C7P4 283 aa18.76■□□□□ 0.59
LAPTM4A-201ENST00000175091 MCM2P49736 904 aa18.76■□□□□ 0.59
LAPTM4A-201ENST00000175091 PRPF40BQ6NWY9 871 aaKnown RBP18.76■□□□□ 0.59
LAPTM4A-201ENST00000175091 CNBD1Q8NA66 436 aa18.76■□□□□ 0.59
LAPTM4A-201ENST00000175091 UPF3BQ9BZI7 483 aaKnown RBP18.76■□□□□ 0.59
LAPTM4A-201ENST00000175091 RPAP1Q9BWH6 1393 aaPredicted RBP18.76■□□□□ 0.59
LAPTM4A-201ENST00000175091 SNAP23O00161 211 aa18.76■□□□□ 0.59
LAPTM4A-201ENST00000175091 ZNF827Q17R98 1081 aa18.76■□□□□ 0.59
LAPTM4A-201ENST00000175091 LRRFIP1Q32MZ4 808 aaKnown RBP18.76■□□□□ 0.59
LAPTM4A-201ENST00000175091 CREB3L3Q68CJ9 461 aa18.76■□□□□ 0.59
LAPTM4A-201ENST00000175091 MAST3O60307 1309 aa18.75■□□□□ 0.59
LAPTM4A-201ENST00000175091 MYH13Q9UKX3 1938 aa18.75■□□□□ 0.59
LAPTM4A-201ENST00000175091 APBA3O96018 575 aa18.75■□□□□ 0.59
LAPTM4A-201ENST00000175091 ZFYP08048 801 aaPredicted RBP18.75■□□□□ 0.59
LAPTM4A-201ENST00000175091 CCDC129Q6ZRS4 1044 aa18.75■□□□□ 0.59
LAPTM4A-201ENST00000175091 CCDC24Q8N4L8 307 aa18.75■□□□□ 0.59
LAPTM4A-201ENST00000175091 KCNJ4P48050 445 aa18.74■□□□□ 0.59
LAPTM4A-201ENST00000175091 SLFNL1Q499Z3 407 aa18.74■□□□□ 0.59
LAPTM4A-201ENST00000175091 PRR5LQ6MZQ0 368 aa18.74■□□□□ 0.59
LAPTM4A-201ENST00000175091 AKT1S1Q96B36 256 aa18.74■□□□□ 0.59
LAPTM4A-201ENST00000175091 CHMP5Q9NZZ3 219 aa18.74■□□□□ 0.59
LAPTM4A-201ENST00000175091 SLC27A2O14975 620 aa18.73■□□□□ 0.59
LAPTM4A-201ENST00000175091 NPHP1O15259 732 aa18.73■□□□□ 0.59
LAPTM4A-201ENST00000175091 CYP2E1P05181 493 aaPredicted RBP18.73■□□□□ 0.59
LAPTM4A-201ENST00000175091 HSP90AA1P07900 732 aaKnown RBP18.73■□□□□ 0.59
LAPTM4A-201ENST00000175091 TM4SF1P30408 202 aa18.73■□□□□ 0.59
LAPTM4A-201ENST00000175091 TTF1Q15361 905 aaPredicted RBP18.73■□□□□ 0.59
LAPTM4A-201ENST00000175091 POTEAQ6S8J7 498 aa18.73■□□□□ 0.59
LAPTM4A-201ENST00000175091 TM6SF1Q9BZW5 370 aa18.73■□□□□ 0.59
LAPTM4A-201ENST00000175091 HMG20BQ9P0W2 317 aa18.73■□□□□ 0.59
LAPTM4A-201ENST00000175091 MINPP1Q9UNW1 487 aa18.73■□□□□ 0.59
LAPTM4A-201ENST00000175091 ANKRD31Q8N7Z5 1873 aa18.73■□□□□ 0.59
LAPTM4A-201ENST00000175091 ZKSCAN1P17029 563 aaPredicted RBP18.73■□□□□ 0.59
LAPTM4A-201ENST00000175091 NBR1Q14596 966 aa18.73■□□□□ 0.59
LAPTM4A-201ENST00000175091 RNF20Q5VTR2 975 aa18.73■□□□□ 0.59
LAPTM4A-201ENST00000175091 TTC14Q96N46 770 aa18.73■□□□□ 0.59
LAPTM4A-201ENST00000175091 CIZ1Q9ULV3 898 aaPredicted RBP18.73■□□□□ 0.59
LAPTM4A-201ENST00000175091 ZNF804BA4D1E1 1349 aa18.72■□□□□ 0.59
LAPTM4A-201ENST00000175091 LAMA4Q16363 1823 aa18.72■□□□□ 0.59
LAPTM4A-201ENST00000175091 RPS8P62241 208 aaKnown RBP18.72■□□□□ 0.59
LAPTM4A-201ENST00000175091 RASGRF1Q13972 1273 aa18.72■□□□□ 0.59
LAPTM4A-201ENST00000175091 UBE4AQ14139 1066 aa18.72■□□□□ 0.59
LAPTM4A-201ENST00000175091 ADCK5Q3MIX3 580 aa18.72■□□□□ 0.59
LAPTM4A-201ENST00000175091 FBXO41Q8TF61 875 aa18.72■□□□□ 0.59
LAPTM4A-201ENST00000175091 QSER1Q2KHR3 1735 aa18.72■□□□□ 0.59
LAPTM4A-201ENST00000175091 M0R2C6 588 aa18.71■□□□□ 0.59
LAPTM4A-201ENST00000175091 NFKBIBQ15653 356 aa18.71■□□□□ 0.59
LAPTM4A-201ENST00000175091 SPATA5Q8NB90 893 aa18.71■□□□□ 0.59
LAPTM4A-201ENST00000175091 APPBP2Q92624 585 aa18.71■□□□□ 0.59
LAPTM4A-201ENST00000175091 OSBP2Q969R2 916 aa18.71■□□□□ 0.59
LAPTM4A-201ENST00000175091 DSCC1Q9BVC3 393 aa18.71■□□□□ 0.59
LAPTM4A-201ENST00000175091 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.71■□□□□ 0.59
LAPTM4A-201ENST00000175091 U3KPZ7 1027 aaPredicted RBP18.71■□□□□ 0.59
LAPTM4A-201ENST00000175091 CASTP20810 708 aaKnown RBP18.7■□□□□ 0.58
LAPTM4A-201ENST00000175091 DDR1Q08345 913 aa18.7■□□□□ 0.58
LAPTM4A-201ENST00000175091 TSGA10IPQ3SY00 556 aa18.7■□□□□ 0.58
LAPTM4A-201ENST00000175091 TMX3Q96JJ7 454 aa18.7■□□□□ 0.58
LAPTM4A-201ENST00000175091 JAKMIP1Q96N16 626 aaKnown RBP18.7■□□□□ 0.58
LAPTM4A-201ENST00000175091 ZSWIM6Q9HCJ5 1215 aa18.7■□□□□ 0.58
LAPTM4A-201ENST00000175091 PIH1D3Q9NQM4 214 aaKnown RBP18.7■□□□□ 0.58
LAPTM4A-201ENST00000175091 LRRC37AA6NMS7 1700 aa18.7■□□□□ 0.58
LAPTM4A-201ENST00000175091 POLRMTO00411 1230 aaKnown RBP18.7■□□□□ 0.58
LAPTM4A-201ENST00000175091 SERPINB2P05120 415 aa18.7■□□□□ 0.58
LAPTM4A-201ENST00000175091 TFCP2L1Q9NZI6 479 aa18.7■□□□□ 0.58
LAPTM4A-201ENST00000175091 COL1A1P02452 1464 aaPredicted RBP18.7■□□□□ 0.58
LAPTM4A-201ENST00000175091 ADD2P35612 726 aa18.69■□□□□ 0.58
LAPTM4A-201ENST00000175091 BCAMP50895 628 aa18.69■□□□□ 0.58
LAPTM4A-201ENST00000175091 ST5P78524 1137 aa18.69■□□□□ 0.58
LAPTM4A-201ENST00000175091 CRY2Q49AN0 593 aa18.69■□□□□ 0.58
LAPTM4A-201ENST00000175091 VPS53Q5VIR6 699 aa18.69■□□□□ 0.58
LAPTM4A-201ENST00000175091 ZSCAN25Q6NSZ9 544 aa18.69■□□□□ 0.58
LAPTM4A-201ENST00000175091 FOXD4L1Q9NU39 408 aa18.69■□□□□ 0.58
LAPTM4A-201ENST00000175091 CUL4AQ13619 759 aa18.68■□□□□ 0.58
LAPTM4A-201ENST00000175091 TAF6LQ9Y6J9 622 aa18.68■□□□□ 0.58
LAPTM4A-201ENST00000175091 HSPD1P10809 573 aaKnown RBP18.68■□□□□ 0.58
LAPTM4A-201ENST00000175091 GRAPQ13588 217 aa18.68■□□□□ 0.58
LAPTM4A-201ENST00000175091 GRAPLQ8TC17 118 aaPredicted RBP18.68■□□□□ 0.58
LAPTM4A-201ENST00000175091 ANKRD2Q9GZV1 360 aa18.68■□□□□ 0.58
LAPTM4A-201ENST00000175091 MAST2Q6P0Q8 1798 aa18.67■□□□□ 0.58
LAPTM4A-201ENST00000175091 PSMA5P28066 241 aa18.67■□□□□ 0.58
LAPTM4A-201ENST00000175091 AK2P54819 239 aa18.67■□□□□ 0.58
LAPTM4A-201ENST00000175091 UBE3CQ15386 1083 aa18.67■□□□□ 0.58
LAPTM4A-201ENST00000175091 WASHC4Q2M389 1173 aa18.67■□□□□ 0.58
LAPTM4A-201ENST00000175091 RUFY3Q7L099 469 aa18.67■□□□□ 0.58
LAPTM4A-201ENST00000175091 COL23A1Q86Y22 540 aaPredicted RBP18.67■□□□□ 0.58
LAPTM4A-201ENST00000175091 PUS7LQ9H0K6 701 aaKnown RBP18.67■□□□□ 0.58
LAPTM4A-201ENST00000175091 CYP46A1Q9Y6A2 500 aa18.67■□□□□ 0.58
LAPTM4A-201ENST00000175091 COL11A2P13942 1736 aaPredicted RBP18.66■□□□□ 0.58
LAPTM4A-201ENST00000175091 LTBP1Q14766 1721 aa18.66■□□□□ 0.58
LAPTM4A-201ENST00000175091 FOXP2O15409 715 aa18.66■□□□□ 0.58
LAPTM4A-201ENST00000175091 IDH1O75874 414 aaKnown RBP18.66■□□□□ 0.58
LAPTM4A-201ENST00000175091 CYP21A2P08686 494 aa18.66■□□□□ 0.58
LAPTM4A-201ENST00000175091 CPA1P15085 419 aa18.66■□□□□ 0.58
LAPTM4A-201ENST00000175091 KRT32Q14532 448 aa18.66■□□□□ 0.58
LAPTM4A-201ENST00000175091 SLC9C2Q5TAH2 1124 aa18.66■□□□□ 0.58
LAPTM4A-201ENST00000175091 FLAD1Q8NFF5 587 aa18.66■□□□□ 0.58
LAPTM4A-201ENST00000175091 TCRBV5S4A2TA0A5A2 114 aa18.65■□□□□ 0.58
LAPTM4A-201ENST00000175091 WTIPA6NIX2 430 aaPredicted RBP18.65■□□□□ 0.58
LAPTM4A-201ENST00000175091 PDE6AP16499 860 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms