RNA–Protein interactions for RNA: ENST00000070846.10

PKP2-201, Transcript of plakophilin 2, humanhuman

TSL 1 (best) BASIC

Gene PKP2, Length 4,241 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-201ENST00000070846 ARHGEF5Q12774 1597 aa13.17□□□□□ -0.3
PKP2-201ENST00000070846 NAPAP54920 295 aa13.17□□□□□ -0.3
PKP2-201ENST00000070846 DLGAP5Q15398 846 aa13.17□□□□□ -0.3
PKP2-201ENST00000070846 SMARCC2Q8TAQ2 1214 aa13.17□□□□□ -0.3
PKP2-201ENST00000070846 MCM4P33991 863 aa13.16□□□□□ -0.3
PKP2-201ENST00000070846 CAGE1Q8TC20 777 aa13.16□□□□□ -0.3
PKP2-201ENST00000070846 ZKSCAN3Q9BRR0 538 aa13.16□□□□□ -0.3
PKP2-201ENST00000070846 ALG1Q9BT22 464 aa13.16□□□□□ -0.3
PKP2-201ENST00000070846 SPATA31A3Q5VYP0 1347 aa13.16□□□□□ -0.3
PKP2-201ENST00000070846 NEURL1BA8MQ27 555 aa13.16□□□□□ -0.3
PKP2-201ENST00000070846 PICK1Q9NRD5 415 aa13.16□□□□□ -0.3
PKP2-201ENST00000070846 PNMA6EA0A0J9YXQ4 647 aa13.16□□□□□ -0.3
PKP2-201ENST00000070846 CALML4Q96GE6 196 aa13.16□□□□□ -0.3
PKP2-201ENST00000070846 LUC7LQ9NQ29 371 aaKnown RBP13.16□□□□□ -0.3
PKP2-201ENST00000070846 AATFQ9NY61 560 aaKnown RBP eCLIP13.16□□□□□ -0.3
PKP2-201ENST00000070846 KDM6BO15054 1643 aa13.16□□□□□ -0.3
PKP2-201ENST00000070846 MAP3K11Q16584 847 aa13.15□□□□□ -0.3
PKP2-201ENST00000070846 Q6ZUG5 572 aa13.15□□□□□ -0.3
PKP2-201ENST00000070846 CNNM3Q8NE01 707 aa13.15□□□□□ -0.3
PKP2-201ENST00000070846 MFSD14BQ5SR56 506 aa13.15□□□□□ -0.3
PKP2-201ENST00000070846 CNKSR1Q969H4 720 aa13.15□□□□□ -0.3
PKP2-201ENST00000070846 STX6O43752 255 aa13.15□□□□□ -0.3
PKP2-201ENST00000070846 RXRAP19793 462 aa13.15□□□□□ -0.3
PKP2-201ENST00000070846 RBM25P49756 843 aaKnown RBP13.15□□□□□ -0.3
PKP2-201ENST00000070846 CFAP100Q494V2 611 aa13.15□□□□□ -0.3
PKP2-201ENST00000070846 BEGAINQ9BUH8 593 aa13.15□□□□□ -0.3
PKP2-201ENST00000070846 TBC1D2Q9BYX2 928 aa13.15□□□□□ -0.3
PKP2-201ENST00000070846 ARMT1Q9H993 441 aa13.15□□□□□ -0.3
PKP2-201ENST00000070846 KIAA0825Q8IV33 1275 aa13.15□□□□□ -0.31
PKP2-201ENST00000070846 FSIP1Q8NA03 581 aa13.14□□□□□ -0.31
PKP2-201ENST00000070846 CCDC148Q8NFR7 591 aa13.14□□□□□ -0.31
PKP2-201ENST00000070846 CERKQ8TCT0 537 aa13.14□□□□□ -0.31
PKP2-201ENST00000070846 ZCCHC11Q5TAX3 1644 aaKnown RBP13.14□□□□□ -0.31
PKP2-201ENST00000070846 SPDYE3A6NKU9 549 aa13.14□□□□□ -0.31
PKP2-201ENST00000070846 SP4Q02446 784 aa13.14□□□□□ -0.31
PKP2-201ENST00000070846 DOK7Q18PE1 504 aa13.14□□□□□ -0.31
PKP2-201ENST00000070846 USP6P35125 1406 aa13.14□□□□□ -0.31
PKP2-201ENST00000070846 SMC5Q8IY18 1101 aa13.14□□□□□ -0.31
PKP2-201ENST00000070846 OTUD7AQ8TE49 926 aaPredicted RBP13.14□□□□□ -0.31
PKP2-201ENST00000070846 TTF2Q9UNY4 1162 aaKnown RBP13.14□□□□□ -0.31
PKP2-201ENST00000070846 MAST3O60307 1309 aa13.13□□□□□ -0.31
PKP2-201ENST00000070846 CTSWP56202 376 aa13.13□□□□□ -0.31
PKP2-201ENST00000070846 TCERG1LQ5VWI1 586 aa13.13□□□□□ -0.31
PKP2-201ENST00000070846 IL6STP40189 918 aaPredicted RBP13.13□□□□□ -0.31
PKP2-201ENST00000070846 CCDC129Q6ZRS4 1044 aa13.13□□□□□ -0.31
PKP2-201ENST00000070846 PLEKHM2Q8IWE5 1019 aa13.13□□□□□ -0.31
PKP2-201ENST00000070846 SERPINB2P05120 415 aa13.13□□□□□ -0.31
PKP2-201ENST00000070846 CCDC171Q6TFL3 1326 aa13.13□□□□□ -0.31
PKP2-201ENST00000070846 BIN1O00499 593 aa13.12□□□□□ -0.31
PKP2-201ENST00000070846 SSFA2P28290 1259 aa13.12□□□□□ -0.31
PKP2-201ENST00000070846 RDXP35241 583 aaKnown RBP13.12□□□□□ -0.31
PKP2-201ENST00000070846 GYG1P46976 350 aa13.12□□□□□ -0.31
PKP2-201ENST00000070846 ENOX2Q16206 610 aaKnown RBP13.12□□□□□ -0.31
PKP2-201ENST00000070846 MAPKAPK5Q8IW41 473 aa13.12□□□□□ -0.31
PKP2-201ENST00000070846 FAM177A1Q8N128 213 aaPredicted RBP13.12□□□□□ -0.31
PKP2-201ENST00000070846 PIGBQ92521 554 aa13.12□□□□□ -0.31
PKP2-201ENST00000070846 TMX3Q96JJ7 454 aa13.12□□□□□ -0.31
PKP2-201ENST00000070846 B4DLN1 442 aa13.12□□□□□ -0.31
PKP2-201ENST00000070846 MRPL12P52815 198 aaKnown RBP13.12□□□□□ -0.31
PKP2-201ENST00000070846 GIGYF2Q6Y7W6 1299 aaKnown RBP13.12□□□□□ -0.31
PKP2-201ENST00000070846 TBC1D22AQ8WUA7 517 aa13.12□□□□□ -0.31
PKP2-201ENST00000070846 SPATA31E1Q6ZUB1 1445 aa13.12□□□□□ -0.31
PKP2-201ENST00000070846 SPDYE4A6NLX3 237 aa13.12□□□□□ -0.31
PKP2-201ENST00000070846 TRIM21P19474 475 aaKnown RBP13.12□□□□□ -0.31
PKP2-201ENST00000070846 SSR1P43307 286 aaKnown RBP13.12□□□□□ -0.31
PKP2-201ENST00000070846 ZAP70P43403 619 aa13.12□□□□□ -0.31
PKP2-201ENST00000070846 ZBTB38Q8NAP3 1195 aaPredicted RBP13.12□□□□□ -0.31
PKP2-201ENST00000070846 APPBP2Q92624 585 aa13.12□□□□□ -0.31
PKP2-201ENST00000070846 USP44Q9H0E7 712 aa13.12□□□□□ -0.31
PKP2-201ENST00000070846 SH2D4AQ9H788 454 aa13.12□□□□□ -0.31
PKP2-201ENST00000070846 MAP3K15Q6ZN16 1313 aa13.12□□□□□ -0.31
PKP2-201ENST00000070846 IGSF1Q8N6C5 1336 aa13.12□□□□□ -0.31
PKP2-201ENST00000070846 HECW2Q9P2P5 1572 aa13.12□□□□□ -0.31
PKP2-201ENST00000070846 GPAA1O43292 621 aa13.12□□□□□ -0.31
PKP2-201ENST00000070846 KIF20AO95235 890 aa13.12□□□□□ -0.31
PKP2-201ENST00000070846 PROSER3Q2NL68 480 aa13.12□□□□□ -0.31
PKP2-201ENST00000070846 SYCP3Q8IZU3 236 aa13.12□□□□□ -0.31
PKP2-201ENST00000070846 SYCE3A1L190 88 aa13.11□□□□□ -0.31
PKP2-201ENST00000070846 B4E1Z4 1266 aa13.11□□□□□ -0.31
PKP2-201ENST00000070846 GPS2Q13227 327 aa13.11□□□□□ -0.31
PKP2-201ENST00000070846 CREB3L3Q68CJ9 461 aa13.11□□□□□ -0.31
PKP2-201ENST00000070846 CPXCR1Q8N123 301 aa13.11□□□□□ -0.31
PKP2-201ENST00000070846 RRP36Q96EU6 259 aaKnown RBP13.11□□□□□ -0.31
PKP2-201ENST00000070846 TSG101Q99816 390 aa13.11□□□□□ -0.31
PKP2-201ENST00000070846 C6orf50Q9HD87 102 aa13.11□□□□□ -0.31
PKP2-201ENST00000070846 ERBB4Q15303 1308 aa13.11□□□□□ -0.31
PKP2-201ENST00000070846 MROH5Q6ZUA9 1318 aa13.11□□□□□ -0.31
PKP2-201ENST00000070846 CALM1P0DP23 149 aa13.11□□□□□ -0.31
PKP2-201ENST00000070846 CALM2P0DP24 149 aa13.11□□□□□ -0.31
PKP2-201ENST00000070846 CALM3P0DP25 149 aa13.11□□□□□ -0.31
PKP2-201ENST00000070846 CHMLP26374 656 aa13.11□□□□□ -0.31
PKP2-201ENST00000070846 APOBRQ0VD83 1088 aa13.11□□□□□ -0.31
PKP2-201ENST00000070846 CCDC181Q5TID7 509 aa13.11□□□□□ -0.31
PKP2-201ENST00000070846 GPCPD1Q9NPB8 672 aa13.11□□□□□ -0.31
PKP2-201ENST00000070846 PRDM15P57071 1507 aaPredicted RBP13.1□□□□□ -0.31
PKP2-201ENST00000070846 ADGRL3Q9HAR2 1447 aa13.1□□□□□ -0.31
PKP2-201ENST00000070846 PRAMEF22A3QJZ6 481 aa13.1□□□□□ -0.31
PKP2-201ENST00000070846 SMTNL1A8MU46 457 aa13.1□□□□□ -0.31
PKP2-201ENST00000070846 ZNF526Q8TF50 670 aaPredicted RBP13.1□□□□□ -0.31
PKP2-201ENST00000070846 TMOD4Q9NZQ9 345 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms