RNA–Protein interactions for RNA: ENSMUST00000194959.5

Usp4-209, Transcript of Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Usp4, Length 3,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4-209ENSMUST00000194959 Morc2aQ69ZX6 1030 aa11.84□□□□□ -0.51
Usp4-209ENSMUST00000194959 Rimbp3Q3V0F0 1606 aa11.84□□□□□ -0.51
Usp4-209ENSMUST00000194959 Brpf3B2KF05 1204 aaKnown RBP11.83□□□□□ -0.51
Usp4-209ENSMUST00000194959 Stk38Q91VJ4 465 aa11.83□□□□□ -0.51
Usp4-209ENSMUST00000194959 Tns2Q8CGB6 1400 aa11.83□□□□□ -0.52
Usp4-209ENSMUST00000194959 Ano6Q6P9J9 911 aa11.83□□□□□ -0.52
Usp4-209ENSMUST00000194959 Acnat2Q8BGG9 420 aa11.83□□□□□ -0.52
Usp4-209ENSMUST00000194959 SdsQ8VBT2 327 aa11.83□□□□□ -0.52
Usp4-209ENSMUST00000194959 Terf2ipQ91VL8 393 aa11.83□□□□□ -0.52
Usp4-209ENSMUST00000194959 Klc3Q91W40 508 aa11.83□□□□□ -0.52
Usp4-209ENSMUST00000194959 Pcdhb15Q91Y04 786 aa11.83□□□□□ -0.52
Usp4-209ENSMUST00000194959 Wdr33Q8K4P0 1330 aaKnown RBP11.83□□□□□ -0.52
Usp4-209ENSMUST00000194959 Pet2A2AHY8 747 aa11.83□□□□□ -0.52
Usp4-209ENSMUST00000194959 Ddb1Q3U1J4 1140 aaKnown RBP11.83□□□□□ -0.52
Usp4-209ENSMUST00000194959 Gas2l3Q3UWW6 683 aa11.83□□□□□ -0.52
Usp4-209ENSMUST00000194959 Usp28Q5I043 1051 aa11.83□□□□□ -0.52
Usp4-209ENSMUST00000194959 Frmd3Q8BHD4 595 aa11.83□□□□□ -0.52
Usp4-209ENSMUST00000194959 Tmem143Q8VD26 458 aa11.83□□□□□ -0.52
Usp4-209ENSMUST00000194959 1700006A11RikB9EHI3 544 aa11.82□□□□□ -0.52
Usp4-209ENSMUST00000194959 Zkscan7E9PVW1 718 aa11.82□□□□□ -0.52
Usp4-209ENSMUST00000194959 Vmn2r23E9PXI5 849 aa11.82□□□□□ -0.52
Usp4-209ENSMUST00000194959 Zbtb7aO88939 569 aaKnown RBP11.82□□□□□ -0.52
Usp4-209ENSMUST00000194959 Bach2P97303 839 aa11.82□□□□□ -0.52
Usp4-209ENSMUST00000194959 Zbtb38Q3LR78 1197 aa11.82□□□□□ -0.52
Usp4-209ENSMUST00000194959 CtcfQ61164 736 aaKnown RBP11.82□□□□□ -0.52
Usp4-209ENSMUST00000194959 Gpatch3Q8BIY1 525 aa11.82□□□□□ -0.52
Usp4-209ENSMUST00000194959 IcoslgQ9JHJ8 322 aa11.82□□□□□ -0.52
Usp4-209ENSMUST00000194959 Usp42B2RQC2 1324 aaKnown RBP11.82□□□□□ -0.52
Usp4-209ENSMUST00000194959 Erbb4Q61527 1308 aa11.82□□□□□ -0.52
Usp4-209ENSMUST00000194959 IbspQ61711 324 aa11.82□□□□□ -0.52
Usp4-209ENSMUST00000194959 Ufl1Q8CCJ3 793 aaKnown RBP11.82□□□□□ -0.52
Usp4-209ENSMUST00000194959 Nrbp1Q99J45 535 aa11.82□□□□□ -0.52
Usp4-209ENSMUST00000194959 Cfap58B2RW38 873 aa11.82□□□□□ -0.52
Usp4-209ENSMUST00000194959 Cyp3a57D3YYZ0 503 aa11.82□□□□□ -0.52
Usp4-209ENSMUST00000194959 Lins1Q3U1D0 764 aa11.82□□□□□ -0.52
Usp4-209ENSMUST00000194959 Esco1Q69Z69 843 aa11.82□□□□□ -0.52
Usp4-209ENSMUST00000194959 Edrf1Q6GQV7 1239 aa11.82□□□□□ -0.52
Usp4-209ENSMUST00000194959 Odf2lQ9D478 642 aa11.82□□□□□ -0.52
Usp4-209ENSMUST00000194959 Efcc1Q9JJF6 558 aa11.82□□□□□ -0.52
Usp4-209ENSMUST00000194959 Zeb2Q9R0G7 1215 aa11.82□□□□□ -0.52
Usp4-209ENSMUST00000194959 Prr5lA2AVJ5 370 aa11.81□□□□□ -0.52
Usp4-209ENSMUST00000194959 Ces1hD3Z298 562 aa11.81□□□□□ -0.52
Usp4-209ENSMUST00000194959 1700113H08RikE9Q9Q5 327 aa11.81□□□□□ -0.52
Usp4-209ENSMUST00000194959 Cavin1O54724 392 aa11.81□□□□□ -0.52
Usp4-209ENSMUST00000194959 Tpd52l1O54818 204 aa11.81□□□□□ -0.52
Usp4-209ENSMUST00000194959 NapbP28663 298 aa11.81□□□□□ -0.52
Usp4-209ENSMUST00000194959 Dnm1P39053 867 aa11.81□□□□□ -0.52
Usp4-209ENSMUST00000194959 Dnajc5P60904 198 aa11.81□□□□□ -0.52
Usp4-209ENSMUST00000194959 Alg3Q8K2A8 438 aa11.81□□□□□ -0.52
Usp4-209ENSMUST00000194959 Robo1O89026 1612 aa11.81□□□□□ -0.52
Usp4-209ENSMUST00000194959 Lipo1J3QME6 396 aa11.81□□□□□ -0.52
Usp4-209ENSMUST00000194959 LyarQ08288 388 aaKnown RBP11.81□□□□□ -0.52
Usp4-209ENSMUST00000194959 Gtf2f1Q3THK3 508 aaKnown RBP11.81□□□□□ -0.52
Usp4-209ENSMUST00000194959 SfswapQ3USH5 945 aaKnown RBP11.81□□□□□ -0.52
Usp4-209ENSMUST00000194959 Rbm19Q8R3C6 952 aaKnown RBP11.81□□□□□ -0.52
Usp4-209ENSMUST00000194959 Ccdc173A0JLY1 547 aa11.8□□□□□ -0.52
Usp4-209ENSMUST00000194959 Fam184aE9PW83 1143 aa11.8□□□□□ -0.52
Usp4-209ENSMUST00000194959 IntuQ059U7 942 aa11.8□□□□□ -0.52
Usp4-209ENSMUST00000194959 Susd4Q8BH32 490 aa11.8□□□□□ -0.52
Usp4-209ENSMUST00000194959 Hps3Q91VB4 1002 aa11.8□□□□□ -0.52
Usp4-209ENSMUST00000194959 Aox1O54754 1333 aa11.8□□□□□ -0.52
Usp4-209ENSMUST00000194959 Pde4bB1AWC9 736 aa11.8□□□□□ -0.52
Usp4-209ENSMUST00000194959 Fam160b2Q80YR2 744 aa11.8□□□□□ -0.52
Usp4-209ENSMUST00000194959 Map10Q8BJS7 891 aa11.8□□□□□ -0.52
Usp4-209ENSMUST00000194959 BrapQ99MP8 591 aa11.8□□□□□ -0.52
Usp4-209ENSMUST00000194959 Zbtb43Q9DAI4 467 aa11.8□□□□□ -0.52
Usp4-209ENSMUST00000194959 Appbp2Q9DAX9 585 aa11.8□□□□□ -0.52
Usp4-209ENSMUST00000194959 Trip6Q9Z1Y4 480 aa11.8□□□□□ -0.52
Usp4-209ENSMUST00000194959 Cyp2d9P11714 504 aa11.8□□□□□ -0.52
Usp4-209ENSMUST00000194959 Sec62Q8BU14 398 aaKnown RBP11.8□□□□□ -0.52
Usp4-209ENSMUST00000194959 Bmp2kQ91Z96 1138 aa11.8□□□□□ -0.52
Usp4-209ENSMUST00000194959 Pde8bE9Q4S1 865 aa11.79□□□□□ -0.52
Usp4-209ENSMUST00000194959 Hvcn1Q3U2S8 269 aa11.79□□□□□ -0.52
Usp4-209ENSMUST00000194959 Mindy4Q3UQI9 744 aa11.79□□□□□ -0.52
Usp4-209ENSMUST00000194959 9230110C19RikQ8CC70 267 aa11.79□□□□□ -0.52
Usp4-209ENSMUST00000194959 Rrp9Q91WM3 475 aaKnown RBP11.79□□□□□ -0.52
Usp4-209ENSMUST00000194959 Clic4Q9QYB1 253 aa11.79□□□□□ -0.52
Usp4-209ENSMUST00000194959 Sos2Q02384 1333 aa11.79□□□□□ -0.52
Usp4-209ENSMUST00000194959 Ell2Q3UKU1 639 aa11.79□□□□□ -0.52
Usp4-209ENSMUST00000194959 Tubb6Q922F4 447 aa11.79□□□□□ -0.52
Usp4-209ENSMUST00000194959 Lonrf3Q9D4H7 753 aa11.79□□□□□ -0.52
Usp4-209ENSMUST00000194959 Plekho1Q9JIY0 408 aa11.79□□□□□ -0.52
Usp4-209ENSMUST00000194959 Pcdhb9E9Q5G2 828 aa11.79□□□□□ -0.52
Usp4-209ENSMUST00000194959 Metap2O08663 478 aaKnown RBP11.79□□□□□ -0.52
Usp4-209ENSMUST00000194959 Myl3P09542 204 aa11.79□□□□□ -0.52
Usp4-209ENSMUST00000194959 Csrnp1P59054 583 aa11.79□□□□□ -0.52
Usp4-209ENSMUST00000194959 Pde4dQ01063 747 aa11.79□□□□□ -0.52
Usp4-209ENSMUST00000194959 Fam102bQ8BQS4 339 aa11.79□□□□□ -0.52
Usp4-209ENSMUST00000194959 ImmtQ8CAQ8 757 aaKnown RBP11.79□□□□□ -0.52
Usp4-209ENSMUST00000194959 Ces1dQ8VCT4 565 aa11.79□□□□□ -0.52
Usp4-209ENSMUST00000194959 Pik3ap1Q9EQ32 811 aa11.79□□□□□ -0.52
Usp4-209ENSMUST00000194959 Ccdc112A0AUP1 442 aa11.78□□□□□ -0.52
Usp4-209ENSMUST00000194959 Rbm28Q8CGC6 750 aaKnown RBP11.78□□□□□ -0.52
Usp4-209ENSMUST00000194959 Ehd4Q9EQP2 541 aa11.78□□□□□ -0.52
Usp4-209ENSMUST00000194959 Slit1Q80TR4 1531 aa11.78□□□□□ -0.52
Usp4-209ENSMUST00000194959 Atad2Q8CDM1 1040 aa11.78□□□□□ -0.52
Usp4-209ENSMUST00000194959 Rbm5Q91YE7 815 aaKnown RBP11.78□□□□□ -0.52
Usp4-209ENSMUST00000194959 Pold4Q9CWP8 107 aa11.78□□□□□ -0.52
Usp4-209ENSMUST00000194959 Mx2Q9WVP9 655 aa11.78□□□□□ -0.52
Usp4-209ENSMUST00000194959 Thsd7aQ69ZU6 1645 aa11.78□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 14.6 ms