RNA–Protein interactions for RNA: ENSMUST00000185852.6

Msh3-202, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Msh3, Length 3,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-202ENSMUST00000185852 Fam193aQ8CGI1 1231 aaKnown RBP12.52□□□□□ -0.4
Msh3-202ENSMUST00000185852 Ubxn4Q8VCH8 506 aa12.52□□□□□ -0.4
Msh3-202ENSMUST00000185852 Pold4Q9CWP8 107 aa12.52□□□□□ -0.4
Msh3-202ENSMUST00000185852 Slurp2P0DP59 97 aa12.52□□□□□ -0.41
Msh3-202ENSMUST00000185852 Cdkl5Q3UTQ8 938 aa12.52□□□□□ -0.41
Msh3-202ENSMUST00000185852 Ccdc82Q6PG04 518 aa12.52□□□□□ -0.41
Msh3-202ENSMUST00000185852 Bloc1s2Q9CWG9 143 aa12.52□□□□□ -0.41
Msh3-202ENSMUST00000185852 Ccne2Q9Z238 404 aa12.52□□□□□ -0.41
Msh3-202ENSMUST00000185852 Ubash3aQ3V3E1 624 aa12.52□□□□□ -0.41
Msh3-202ENSMUST00000185852 Akr1c19G3X9Y6 323 aa12.51□□□□□ -0.41
Msh3-202ENSMUST00000185852 Trim30aP15533 496 aa12.51□□□□□ -0.41
Msh3-202ENSMUST00000185852 RdxP26043 583 aaKnown RBP12.51□□□□□ -0.41
Msh3-202ENSMUST00000185852 Ncf1Q09014 390 aa12.51□□□□□ -0.41
Msh3-202ENSMUST00000185852 Igf2bp2Q5SF07 592 aaKnown RBP12.51□□□□□ -0.41
Msh3-202ENSMUST00000185852 Rbm43Q99J64 343 aa12.51□□□□□ -0.41
Msh3-202ENSMUST00000185852 Simc1E9Q6E9 1354 aa12.51□□□□□ -0.41
Msh3-202ENSMUST00000185852 B4galnt4Q766D5 1034 aa12.51□□□□□ -0.41
Msh3-202ENSMUST00000185852 IcoslgQ9JHJ8 322 aa12.51□□□□□ -0.41
Msh3-202ENSMUST00000185852 Adcy9P51830 1353 aa12.51□□□□□ -0.41
Msh3-202ENSMUST00000185852 Tecpr2Q3UH45 1423 aa12.51□□□□□ -0.41
Msh3-202ENSMUST00000185852 Qser1A2BIE1 1698 aa12.51□□□□□ -0.41
Msh3-202ENSMUST00000185852 Kdm3aQ6PCM1 1323 aa12.51□□□□□ -0.41
Msh3-202ENSMUST00000185852 Pde8bE9Q4S1 865 aa12.51□□□□□ -0.41
Msh3-202ENSMUST00000185852 Pkp1P97350 728 aaKnown RBP12.51□□□□□ -0.41
Msh3-202ENSMUST00000185852 NfkbibQ60778 359 aa12.51□□□□□ -0.41
Msh3-202ENSMUST00000185852 Acap3Q6NXL5 833 aa12.51□□□□□ -0.41
Msh3-202ENSMUST00000185852 Rnf41Q8BH75 317 aa12.51□□□□□ -0.41
Msh3-202ENSMUST00000185852 Ndufa8Q9DCJ5 172 aa12.51□□□□□ -0.41
Msh3-202ENSMUST00000185852 Hmg20bQ9Z104 317 aa12.51□□□□□ -0.41
Msh3-202ENSMUST00000185852 Topbp1Q6ZQF0 1515 aa12.5□□□□□ -0.41
Msh3-202ENSMUST00000185852 Csrnp1P59054 583 aa12.5□□□□□ -0.41
Msh3-202ENSMUST00000185852 Ddx19aQ61655 478 aaKnown RBP12.5□□□□□ -0.41
Msh3-202ENSMUST00000185852 Mrpl44Q9CY73 333 aaKnown RBP12.5□□□□□ -0.41
Msh3-202ENSMUST00000185852 Appbp2Q9DAX9 585 aa12.5□□□□□ -0.41
Msh3-202ENSMUST00000185852 Mrpl12Q9DB15 201 aaKnown RBP12.5□□□□□ -0.41
Msh3-202ENSMUST00000185852 PdcQ9QW08 244 aa12.5□□□□□ -0.41
Msh3-202ENSMUST00000185852 Parp14Q2EMV9 1817 aa12.5□□□□□ -0.41
Msh3-202ENSMUST00000185852 Ift74Q8BKE9 600 aa12.5□□□□□ -0.41
Msh3-202ENSMUST00000185852 Pcdhb5Q91XZ5 792 aa12.5□□□□□ -0.41
Msh3-202ENSMUST00000185852 Gja10Q9WUS4 505 aa12.5□□□□□ -0.41
Msh3-202ENSMUST00000185852 Itsn2Q9Z0R6 1659 aa12.5□□□□□ -0.41
Msh3-202ENSMUST00000185852 DlatQ8BMF4 642 aa12.5□□□□□ -0.41
Msh3-202ENSMUST00000185852 Olfm5Q8BU90 496 aa12.5□□□□□ -0.41
Msh3-202ENSMUST00000185852 Tubb6Q922F4 447 aa12.5□□□□□ -0.41
Msh3-202ENSMUST00000185852 Cyp2ab1S4R196 498 aa12.5□□□□□ -0.41
Msh3-202ENSMUST00000185852 Copb2O55029 905 aa12.49□□□□□ -0.41
Msh3-202ENSMUST00000185852 Rrp12Q6P5B0 1295 aaKnown RBP12.49□□□□□ -0.41
Msh3-202ENSMUST00000185852 Mast3Q3U214 1321 aa12.49□□□□□ -0.41
Msh3-202ENSMUST00000185852 Nfil3O08750 462 aa12.49□□□□□ -0.41
Msh3-202ENSMUST00000185852 Hspd1P63038 573 aaKnown RBP12.49□□□□□ -0.41
Msh3-202ENSMUST00000185852 Mctp2Q5RJH2 878 aa12.49□□□□□ -0.41
Msh3-202ENSMUST00000185852 Vps37dQ810I0 261 aa12.49□□□□□ -0.41
Msh3-202ENSMUST00000185852 Bcl2l12Q9D3J3 255 aa12.49□□□□□ -0.41
Msh3-202ENSMUST00000185852 Becn1O88597 448 aa12.49□□□□□ -0.41
Msh3-202ENSMUST00000185852 Dynll1P63168 89 aa12.49□□□□□ -0.41
Msh3-202ENSMUST00000185852 Cers3Q1A3B0 383 aa12.49□□□□□ -0.41
Msh3-202ENSMUST00000185852 Sp4Q62445 782 aa12.49□□□□□ -0.41
Msh3-202ENSMUST00000185852 Snx13Q6PHS6 957 aa12.49□□□□□ -0.41
Msh3-202ENSMUST00000185852 Tmc2Q8R4P4 888 aa12.49□□□□□ -0.41
Msh3-202ENSMUST00000185852 Rufy3Q9D394 469 aa12.49□□□□□ -0.41
Msh3-202ENSMUST00000185852 Plekhg2Q6KAU7 1340 aa12.48□□□□□ -0.41
Msh3-202ENSMUST00000185852 Znf692Q3U381 531 aa12.48□□□□□ -0.41
Msh3-202ENSMUST00000185852 Atp1a3Q6PIC6 1013 aa12.48□□□□□ -0.41
Msh3-202ENSMUST00000185852 Ranbp6Q8BIV3 1105 aa12.48□□□□□ -0.41
Msh3-202ENSMUST00000185852 Stn1Q8K2X3 378 aa12.48□□□□□ -0.41
Msh3-202ENSMUST00000185852 Pdia6Q922R8 440 aaKnown RBP12.48□□□□□ -0.41
Msh3-202ENSMUST00000185852 Clip2Q9Z0H8 1047 aa12.48□□□□□ -0.41
Msh3-202ENSMUST00000185852 Prr16A3KMN5 304 aa12.48□□□□□ -0.41
Msh3-202ENSMUST00000185852 Wdr70Q3TWF6 657 aa12.48□□□□□ -0.41
Msh3-202ENSMUST00000185852 PicalmQ7M6Y3 660 aaKnown RBP12.48□□□□□ -0.41
Msh3-202ENSMUST00000185852 Rps6kb1Q8BSK8 525 aa12.48□□□□□ -0.41
Msh3-202ENSMUST00000185852 Trim52Q8CDV4 233 aa12.48□□□□□ -0.41
Msh3-202ENSMUST00000185852 Cfap58B2RW38 873 aa12.48□□□□□ -0.41
Msh3-202ENSMUST00000185852 Myo1bP46735 1107 aa12.48□□□□□ -0.41
Msh3-202ENSMUST00000185852 GalcP54818 684 aa12.48□□□□□ -0.41
Msh3-202ENSMUST00000185852 Kmt5bQ3U8K7 883 aa12.48□□□□□ -0.41
Msh3-202ENSMUST00000185852 Cep120Q7TSG1 988 aa12.48□□□□□ -0.41
Msh3-202ENSMUST00000185852 Abcc10Q8R4P9 1501 aa12.48□□□□□ -0.41
Msh3-202ENSMUST00000185852 Ncbp1Q3UYV9 790 aaKnown RBP12.47□□□□□ -0.41
Msh3-202ENSMUST00000185852 Utp18Q5SSI6 552 aaKnown RBP12.47□□□□□ -0.41
Msh3-202ENSMUST00000185852 Kcnj14Q8JZN3 434 aa12.47□□□□□ -0.41
Msh3-202ENSMUST00000185852 Abcc4E9Q236 1325 aa12.47□□□□□ -0.41
Msh3-202ENSMUST00000185852 MsnP26041 577 aaKnown RBP12.47□□□□□ -0.41
Msh3-202ENSMUST00000185852 Oxr1Q4KMM3 866 aa12.47□□□□□ -0.41
Msh3-202ENSMUST00000185852 Cep131Q62036 1060 aa12.47□□□□□ -0.41
Msh3-202ENSMUST00000185852 Ift122Q6NWV3 1182 aa12.47□□□□□ -0.41
Msh3-202ENSMUST00000185852 Ppp1r10Q80W00 888 aaKnown RBP12.47□□□□□ -0.41
Msh3-202ENSMUST00000185852 Sptlc3Q8BG54 563 aa12.47□□□□□ -0.41
Msh3-202ENSMUST00000185852 Tmx1Q8VBT0 278 aa12.47□□□□□ -0.41
Msh3-202ENSMUST00000185852 4931400O07RikQ9D4M5 137 aa12.47□□□□□ -0.41
Msh3-202ENSMUST00000185852 SelenooQ9DBC0 667 aa12.47□□□□□ -0.41
Msh3-202ENSMUST00000185852 Pdcd11Q6NS46 1862 aaKnown RBP12.47□□□□□ -0.41
Msh3-202ENSMUST00000185852 Atp8a2P98200 1148 aa12.47□□□□□ -0.41
Msh3-202ENSMUST00000185852 Ubac1Q8VDI7 409 aa12.47□□□□□ -0.41
Msh3-202ENSMUST00000185852 Ssfa2Q922B9 1252 aa12.47□□□□□ -0.41
Msh3-202ENSMUST00000185852 RabggtaQ9JHK4 567 aa12.47□□□□□ -0.41
Msh3-202ENSMUST00000185852 Adarb2Q9JI20 745 aa12.47□□□□□ -0.41
Msh3-202ENSMUST00000185852 Rims2Q9EQZ7 1530 aa12.47□□□□□ -0.41
Msh3-202ENSMUST00000185852 A0A1W2P7S8 802 aa12.46□□□□□ -0.41
Msh3-202ENSMUST00000185852 Cdc5lQ6A068 802 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 31.9 ms