RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 StrbpQ91WM1 672 aaKnown RBP7.33□□□□□ -1.24
Lig4-202ENSMUST00000170033 Slc5a4bQ91ZP4 660 aa7.33□□□□□ -1.24
Lig4-202ENSMUST00000170033 Zfp804bA0A0G2JGH6 1343 aa7.33□□□□□ -1.24
Lig4-202ENSMUST00000170033 Trap1aP19473 224 aa7.33□□□□□ -1.24
Lig4-202ENSMUST00000170033 FanccP50652 591 aa7.33□□□□□ -1.24
Lig4-202ENSMUST00000170033 Smarcc2Q6PDG5 1213 aa7.33□□□□□ -1.24
Lig4-202ENSMUST00000170033 Mtmr3Q8K296 1196 aa7.33□□□□□ -1.24
Lig4-202ENSMUST00000170033 Srgap1Q91Z69 1062 aa7.33□□□□□ -1.24
Lig4-202ENSMUST00000170033 Gm10471E9Q1C7 252 aa7.32□□□□□ -1.24
Lig4-202ENSMUST00000170033 Tnnt1O88346 262 aa7.32□□□□□ -1.24
Lig4-202ENSMUST00000170033 MecomP14404 1042 aa7.32□□□□□ -1.24
Lig4-202ENSMUST00000170033 Il17raQ60943 864 aa7.32□□□□□ -1.24
Lig4-202ENSMUST00000170033 Gnl3lQ6PGG6 577 aaKnown RBP7.32□□□□□ -1.24
Lig4-202ENSMUST00000170033 Usp44Q8C2S0 711 aa7.32□□□□□ -1.24
Lig4-202ENSMUST00000170033 Nop14Q8R3N1 860 aaKnown RBP7.32□□□□□ -1.24
Lig4-202ENSMUST00000170033 BrapQ99MP8 591 aa7.32□□□□□ -1.24
Lig4-202ENSMUST00000170033 Slc24a3Q99PD7 645 aa7.32□□□□□ -1.24
Lig4-202ENSMUST00000170033 Lmbr1lQ9D1E5 489 aa7.32□□□□□ -1.24
Lig4-202ENSMUST00000170033 Gm7347D3YYI9 267 aa7.32□□□□□ -1.24
Lig4-202ENSMUST00000170033 Stat1P42225 749 aa7.32□□□□□ -1.24
Lig4-202ENSMUST00000170033 Cct2P80314 535 aaKnown RBP7.32□□□□□ -1.24
Lig4-202ENSMUST00000170033 Nucb2P81117 420 aa7.32□□□□□ -1.24
Lig4-202ENSMUST00000170033 Gsdma2Q32M21 443 aa7.32□□□□□ -1.24
Lig4-202ENSMUST00000170033 Tmem109Q3UBX0 243 aa7.32□□□□□ -1.24
Lig4-202ENSMUST00000170033 Dixdc1Q80Y83 711 aa7.32□□□□□ -1.24
Lig4-202ENSMUST00000170033 Sp8Q8BMJ8 486 aa7.32□□□□□ -1.24
Lig4-202ENSMUST00000170033 Slc26a8Q8R0C3 999 aa7.32□□□□□ -1.24
Lig4-202ENSMUST00000170033 Krt85Q9Z2T6 507 aa7.32□□□□□ -1.24
Lig4-202ENSMUST00000170033 AceP09470 1312 aa7.32□□□□□ -1.24
Lig4-202ENSMUST00000170033 Gm973E9Q295 1059 aa7.32□□□□□ -1.24
Lig4-202ENSMUST00000170033 Gadd45bP22339 160 aa7.32□□□□□ -1.24
Lig4-202ENSMUST00000170033 Ovgp1Q62010 721 aa7.32□□□□□ -1.24
Lig4-202ENSMUST00000170033 Inpp5bQ8K337 993 aa7.32□□□□□ -1.24
Lig4-202ENSMUST00000170033 Dnaaf4Q8R368 420 aa7.32□□□□□ -1.24
Lig4-202ENSMUST00000170033 Arl10Q9QXJ4 243 aa7.32□□□□□ -1.24
Lig4-202ENSMUST00000170033 Gm1979E9QAN3 267 aa7.31□□□□□ -1.24
Lig4-202ENSMUST00000170033 MsnP26041 577 aaKnown RBP7.31□□□□□ -1.24
Lig4-202ENSMUST00000170033 Esyt1Q3U7R1 1092 aaKnown RBP7.31□□□□□ -1.24
Lig4-202ENSMUST00000170033 Atf3Q60765 181 aa7.31□□□□□ -1.24
Lig4-202ENSMUST00000170033 Rab3gap1Q80UJ7 981 aa7.31□□□□□ -1.24
Lig4-202ENSMUST00000170033 Ncaph2Q8BSP2 607 aa7.31□□□□□ -1.24
Lig4-202ENSMUST00000170033 Plcd1Q8R3B1 756 aa7.31□□□□□ -1.24
Lig4-202ENSMUST00000170033 Tmx1Q8VBT0 278 aa7.31□□□□□ -1.24
Lig4-202ENSMUST00000170033 Grpel1Q99LP6 217 aa7.31□□□□□ -1.24
Lig4-202ENSMUST00000170033 Stard3nlQ9DCI3 235 aa7.31□□□□□ -1.24
Lig4-202ENSMUST00000170033 Lama4P97927 1816 aa7.31□□□□□ -1.24
Lig4-202ENSMUST00000170033 Zkscan7E9PVW1 718 aa7.31□□□□□ -1.24
Lig4-202ENSMUST00000170033 Gm21671G3UY31 267 aa7.31□□□□□ -1.24
Lig4-202ENSMUST00000170033 Limch1Q3UH68 1057 aa7.31□□□□□ -1.24
Lig4-202ENSMUST00000170033 Pick1Q62083 416 aa7.31□□□□□ -1.24
Lig4-202ENSMUST00000170033 Ankib1Q6ZPS6 1085 aa7.31□□□□□ -1.24
Lig4-202ENSMUST00000170033 Srek1Q8BZX4 494 aaKnown RBP7.31□□□□□ -1.24
Lig4-202ENSMUST00000170033 Tmc2Q8R4P4 888 aa7.31□□□□□ -1.24
Lig4-202ENSMUST00000170033 Telo2Q9DC40 840 aaKnown RBP7.31□□□□□ -1.24
Lig4-202ENSMUST00000170033 Add3Q9QYB5 706 aaKnown RBP7.31□□□□□ -1.24
Lig4-202ENSMUST00000170033 Nwd2Q6P5U7 1742 aa7.31□□□□□ -1.24
Lig4-202ENSMUST00000170033 Myh3P13541 1940 aa7.3□□□□□ -1.24
Lig4-202ENSMUST00000170033 Asic4Q7TNS7 539 aa7.3□□□□□ -1.24
Lig4-202ENSMUST00000170033 Ints4Q8CIM8 964 aa7.3□□□□□ -1.24
Lig4-202ENSMUST00000170033 Znf622Q91VY9 476 aa7.3□□□□□ -1.24
Lig4-202ENSMUST00000170033 Clstn1Q9EPL2 979 aa7.3□□□□□ -1.24
Lig4-202ENSMUST00000170033 Spata31d1bE9QA57 1361 aa7.3□□□□□ -1.24
Lig4-202ENSMUST00000170033 Mst1rQ62190 1378 aa7.3□□□□□ -1.24
Lig4-202ENSMUST00000170033 Rbbp8nlA2ABX0 614 aa7.3□□□□□ -1.24
Lig4-202ENSMUST00000170033 Cfap58B2RW38 873 aa7.3□□□□□ -1.24
Lig4-202ENSMUST00000170033 Card6E9PWH2 1175 aa7.3□□□□□ -1.24
Lig4-202ENSMUST00000170033 Speer4aF8VPX6 267 aa7.3□□□□□ -1.24
Lig4-202ENSMUST00000170033 Map2k1P31938 393 aa7.3□□□□□ -1.24
Lig4-202ENSMUST00000170033 Plcb3P51432 1234 aaKnown RBP7.3□□□□□ -1.24
Lig4-202ENSMUST00000170033 Bach2P97303 839 aa7.3□□□□□ -1.24
Lig4-202ENSMUST00000170033 Kcnd1Q03719 651 aa7.3□□□□□ -1.24
Lig4-202ENSMUST00000170033 Hdgfl1Q2VPR5 283 aa7.3□□□□□ -1.24
Lig4-202ENSMUST00000170033 Fkbp5Q64378 456 aa7.3□□□□□ -1.24
Lig4-202ENSMUST00000170033 Atad2Q8CDM1 1040 aa7.3□□□□□ -1.24
Lig4-202ENSMUST00000170033 Ubxn4Q8VCH8 506 aa7.3□□□□□ -1.24
Lig4-202ENSMUST00000170033 Tubb4aQ9D6F9 444 aa7.3□□□□□ -1.24
Lig4-202ENSMUST00000170033 Armc3A2AU72 881 aa7.3□□□□□ -1.24
Lig4-202ENSMUST00000170033 AK157302I3ITR1 129 aa7.3□□□□□ -1.24
Lig4-202ENSMUST00000170033 Myo1bP46735 1107 aa7.3□□□□□ -1.24
Lig4-202ENSMUST00000170033 Nkx2-3P97334 362 aa7.3□□□□□ -1.24
Lig4-202ENSMUST00000170033 Nxf2Q4ZGD8 691 aa7.3□□□□□ -1.24
Lig4-202ENSMUST00000170033 ZyxQ62523 564 aa7.3□□□□□ -1.24
Lig4-202ENSMUST00000170033 Tshz3Q8CGV9 1081 aa7.3□□□□□ -1.24
Lig4-202ENSMUST00000170033 Pof1bQ8K4L4 587 aa7.3□□□□□ -1.24
Lig4-202ENSMUST00000170033 Gpr108Q91WD0 569 aa7.3□□□□□ -1.24
Lig4-202ENSMUST00000170033 Trim59Q922Y2 403 aa7.3□□□□□ -1.24
Lig4-202ENSMUST00000170033 Isca1Q9D924 129 aa7.3□□□□□ -1.24
Lig4-202ENSMUST00000170033 Cwc25Q9DBF7 416 aa7.3□□□□□ -1.24
Lig4-202ENSMUST00000170033 Clec11aO88200 328 aa7.29□□□□□ -1.24
Lig4-202ENSMUST00000170033 Csrnp1P59054 583 aa7.29□□□□□ -1.24
Lig4-202ENSMUST00000170033 Atp8a2P98200 1148 aa7.29□□□□□ -1.24
Lig4-202ENSMUST00000170033 Oxsr1Q6P9R2 527 aa7.29□□□□□ -1.24
Lig4-202ENSMUST00000170033 Wdr24Q8CFJ9 790 aa7.29□□□□□ -1.24
Lig4-202ENSMUST00000170033 Paf1Q8K2T8 535 aa7.29□□□□□ -1.24
Lig4-202ENSMUST00000170033 CerkQ8K4Q7 531 aa7.29□□□□□ -1.24
Lig4-202ENSMUST00000170033 Ppp1r12aQ9DBR7 1029 aaKnown RBP7.29□□□□□ -1.24
Lig4-202ENSMUST00000170033 Gipc2Q9Z2H7 314 aa7.29□□□□□ -1.24
Lig4-202ENSMUST00000170033 Snapc4Q8BP86 1333 aa7.29□□□□□ -1.24
Lig4-202ENSMUST00000170033 Ankrd31A0A140LI88 1765 aa7.29□□□□□ -1.24
Lig4-202ENSMUST00000170033 Cfap73J3QPZ5 306 aa7.29□□□□□ -1.24
Retrieved 100 of 22,080 RNA–protein pairs in 31.6 ms