RNA–Protein interactions for RNA: ENSMUST00000115659.5

Pcdha9-201, Transcript of Protocadherin alpha-9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha9, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9-201ENSMUST00000115659 F2rP30558 430 aa17.59■□□□□ 0.41
Pcdha9-201ENSMUST00000115659 Gna11P21278 359 aa17.58■□□□□ 0.41
Pcdha9-201ENSMUST00000115659 Gm28047Q3US59 414 aa17.58■□□□□ 0.41
Pcdha9-201ENSMUST00000115659 Scaf1Q5U4C3 1256 aaKnown RBP17.58■□□□□ 0.41
Pcdha9-201ENSMUST00000115659 Prex2Q3LAC4 1598 aa17.58■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Ncf1Q09014 390 aa17.58■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Ubxn1Q922Y1 297 aa17.58■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Ncapd2Q8K2Z4 1392 aa17.58■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Hook2Q7TMK6 716 aa17.58■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Rassf2Q8BMS9 326 aa17.58■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Atg3Q9CPX6 314 aa17.58■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Cep19Q9CQA8 163 aa17.58■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Sdad1Q80UZ2 687 aaKnown RBP17.57■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Ppp6r3Q922D4 844 aa17.57■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Six6os1Q9CTN5 574 aa17.57■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Xrcc4Q924T3 326 aa17.57■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Epb41l3Q9WV92 929 aa17.57■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Gm28510A0A087WP28 240 aa17.57■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Senp1P59110 640 aa17.57■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Rrp1P56183 494 aaKnown RBP17.57■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Eya1P97767 591 aa17.57■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Gzf1Q4VBD9 706 aa17.57■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Pcdhb22Q91XZ8 794 aa17.57■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Mrpl12Q9DB15 201 aaKnown RBP17.57■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Ccnl1Q52KE7 532 aaKnown RBP17.57■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Olfm5Q8BU90 496 aa17.57■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Lmod1Q8BVA4 595 aa17.57■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Ms4a1P19437 291 aa17.56■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Mindy4Q3UQI9 744 aa17.56■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Anp32cQ64G17 123 aa17.56■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Fermt1P59113 677 aa17.56■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Rassf4Q8CB96 322 aa17.56■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Zfp213E9QAW0 468 aa17.56■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Tm6sf1P58749 370 aa17.56■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Nap1l4Q78ZA7 375 aaKnown RBP17.56■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Pym1Q8CHP5 203 aaKnown RBP17.56■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Dnajc10Q9DC23 793 aa17.56■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Kdm1aQ6ZQ88 853 aa17.56■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Map3k11Q80XI6 850 aa17.56■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Ttc14Q9CSP9 761 aa17.56■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Znf394Q9Z1D9 521 aa17.56■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Mast3Q3U214 1321 aa17.55■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Cdk13Q69ZA1 1511 aaKnown RBP17.55■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Dmrt2Q8BG36 561 aa17.55■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Zhx1P70121 873 aa17.55■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Slc5a4bQ91ZP4 660 aa17.55■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Nphp4P59240 1425 aa17.55■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Prl3d3A0A0M6L0J6 224 aa17.55■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Il4rP16382 810 aa17.55■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Clcn1Q64347 994 aa17.55■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Bicd1Q8BR07 835 aa17.55■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Calml3Q9D6P8 149 aa17.55■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 WizO88286 1684 aaKnown RBP17.55■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Pla2r1Q62028 1487 aa17.55■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Lrrc43Q3V0L5 667 aa17.55■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Tex14Q7M6U3 1450 aa17.54■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Tekt3Q6X6Z7 490 aa17.54■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 ThemisQ8BGW0 636 aa17.54■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Taok3Q8BYC6 898 aa17.54■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Nop2Q922K7 793 aaKnown RBP17.54■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 St5Q924W7 1134 aa17.54■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Ccdc114Q3UX62 658 aa17.54■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Gtf3c5Q8R2T8 520 aa17.54■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Lrrc7Q80TE7 1490 aa17.54■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Samd9lQ69Z37 1561 aa17.54■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Morc2aQ69ZX6 1030 aa17.54■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Acnat2Q8BGG9 420 aa17.54■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Hexim1Q8R409 356 aaKnown RBP17.54■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Mlh1Q9JK91 760 aa17.54■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Tmod2Q9JKK7 351 aa17.54■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 PxdnQ3UQ28 1475 aa17.54■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Lmtk2Q3TYD6 1471 aa17.54■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Apol10bG3X9K7 334 aa17.54■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Spa17Q62252 149 aa17.54■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Mkrn1Q9QXP6 481 aa17.54■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Disp1Q3TDN0 1521 aa17.54■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Adgrb2Q8CGM1 1561 aa17.54■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Rnf216P58283 853 aa17.53■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Eif3j1Q3UGC7 261 aaKnown RBP17.53■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Eif3j2Q66JS6 263 aa17.53■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 GlmnQ8BZM1 596 aa17.53■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Kif17Q99PW8 1038 aa17.53■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Atp1a4Q9WV27 1032 aa17.53■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Letm1Q9Z2I0 738 aa17.53■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 CalcaP70160 136 aa17.53■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Ubash3aQ3V3E1 624 aa17.53■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Neurog2P70447 263 aa17.53■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Dact3Q0PHV7 610 aa17.53■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Atp12aQ9Z1W8 1035 aa17.53■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Asic3Q6X1Y6 530 aa17.52■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Rlbp1Q9Z275 317 aa17.52■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Diaph1O08808 1255 aa17.52■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Tcerg1lQ3B807 590 aa17.52■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Gtpbp4Q99ME9 634 aaKnown RBP17.52■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Ccdc105Q9D4K7 499 aa17.52■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Snrpa1P57784 255 aaKnown RBP17.52■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Frat1P70339 274 aa17.52■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Ccdc157Q5SPX1 718 aa17.52■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Kcnn1Q9EQR3 537 aa17.52■□□□□ 0.4
Pcdha9-201ENSMUST00000115659 Osbpl5Q9ER64 874 aa17.52■□□□□ 0.4
Retrieved 100 of 22,080 RNA–protein pairs in 13.9 ms