RNA–Protein interactions for RNA: ENSMUST00000111051.9

Bdnf-210, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 4,125 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-210ENSMUST00000111051 Prl7a2O54831 253 aa9.66□□□□□ -0.86
Bdnf-210ENSMUST00000111051 TbcaP48428 108 aaKnown RBP9.66□□□□□ -0.86
Bdnf-210ENSMUST00000111051 Ncoa4Q5U4H9 625 aa9.66□□□□□ -0.86
Bdnf-210ENSMUST00000111051 Dnaaf2Q8BPI1 814 aa9.66□□□□□ -0.86
Bdnf-210ENSMUST00000111051 Klhl30Q8C3F7 581 aa9.66□□□□□ -0.86
Bdnf-210ENSMUST00000111051 Naa16Q9DBB4 864 aa9.66□□□□□ -0.86
Bdnf-210ENSMUST00000111051 Abl1P00520 1123 aa9.66□□□□□ -0.86
Bdnf-210ENSMUST00000111051 Kcnk13Q8R1P5 405 aa9.66□□□□□ -0.86
Bdnf-210ENSMUST00000111051 Yeats4Q9CR11 227 aaKnown RBP9.66□□□□□ -0.86
Bdnf-210ENSMUST00000111051 Tbc1d7Q9D0K0 293 aa9.66□□□□□ -0.86
Bdnf-210ENSMUST00000111051 Nol7Q9D7Z3 254 aaKnown RBP9.66□□□□□ -0.86
Bdnf-210ENSMUST00000111051 Tbc1d4Q8BYJ6 1307 aa9.65□□□□□ -0.86
Bdnf-210ENSMUST00000111051 Gm29094F6Q785 221 aa9.65□□□□□ -0.86
Bdnf-210ENSMUST00000111051 Sult6b1P0CC03 303 aa9.65□□□□□ -0.86
Bdnf-210ENSMUST00000111051 Sdc2P43407 202 aa9.65□□□□□ -0.86
Bdnf-210ENSMUST00000111051 Mcm6P97311 821 aa9.65□□□□□ -0.86
Bdnf-210ENSMUST00000111051 GnpatP98192 678 aa9.65□□□□□ -0.86
Bdnf-210ENSMUST00000111051 Nlrp1aQ2LKU9 1182 aa9.65□□□□□ -0.86
Bdnf-210ENSMUST00000111051 Fam228bQ497Q6 232 aa9.65□□□□□ -0.86
Bdnf-210ENSMUST00000111051 Jakmip3Q5DTN8 844 aa9.65□□□□□ -0.86
Bdnf-210ENSMUST00000111051 Cyp2d12Q8BVD2 504 aa9.65□□□□□ -0.86
Bdnf-210ENSMUST00000111051 Lmbrd2Q8C561 694 aa9.65□□□□□ -0.86
Bdnf-210ENSMUST00000111051 Cnot6lQ8VEG6 555 aa9.65□□□□□ -0.86
Bdnf-210ENSMUST00000111051 Farp2Q91VS8 1065 aa9.65□□□□□ -0.86
Bdnf-210ENSMUST00000111051 Krt23Q99PS0 422 aa9.65□□□□□ -0.86
Bdnf-210ENSMUST00000111051 MthfsQ9D110 203 aa9.65□□□□□ -0.86
Bdnf-210ENSMUST00000111051 Zeb2Q9R0G7 1215 aa9.65□□□□□ -0.86
Bdnf-210ENSMUST00000111051 Kif3cO35066 796 aa9.65□□□□□ -0.86
Bdnf-210ENSMUST00000111051 Timm10P62073 90 aa9.65□□□□□ -0.86
Bdnf-210ENSMUST00000111051 Adora1Q60612 326 aa9.65□□□□□ -0.86
Bdnf-210ENSMUST00000111051 Brms1Q99N20 246 aa9.65□□□□□ -0.86
Bdnf-210ENSMUST00000111051 Fam213aQ9CYH2 218 aa9.65□□□□□ -0.86
Bdnf-210ENSMUST00000111051 Zbtb43Q9DAI4 467 aa9.65□□□□□ -0.86
Bdnf-210ENSMUST00000111051 Elf2Q9JHC9 593 aa9.65□□□□□ -0.86
Bdnf-210ENSMUST00000111051 LratQ9JI60 231 aa9.65□□□□□ -0.86
Bdnf-210ENSMUST00000111051 Abcd1P48410 736 aa9.65□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Ehmt1Q5DW34 1296 aa9.65□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Ifit1Q64282 463 aa9.65□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Rbm17Q8JZX4 405 aaKnown RBP9.65□□□□□ -0.87
Bdnf-210ENSMUST00000111051 SdsQ8VBT2 327 aa9.65□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Efcab2Q9CQ46 164 aa9.65□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Xpo4Q9ESJ0 1151 aa9.65□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Ino80Q6ZPV2 1559 aa9.65□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Ppm1eQ80TL0 749 aa9.64□□□□□ -0.87
Bdnf-210ENSMUST00000111051 4930504O13RikQ8C5Z9 145 aa9.64□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Chrm1P12657 460 aa9.64□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Phf23Q8BSN5 401 aa9.64□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Zmynd15Q8C0R7 736 aa9.64□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Slc39a6Q8C145 765 aa9.64□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Zfp202Q8C879 641 aa9.64□□□□□ -0.87
Bdnf-210ENSMUST00000111051 StrbpQ91WM1 672 aaKnown RBP9.64□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Usp32F8VPZ3 1604 aa9.64□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Eya2O08575 532 aa9.64□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Stim1P70302 685 aa9.64□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Trak2Q6P9N8 913 aa9.64□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Ccdc12Q8R344 166 aaKnown RBP9.64□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Gigyf1Q99MR1 1044 aaKnown RBP9.64□□□□□ -0.87
Bdnf-210ENSMUST00000111051 4930548H24RikQ9D496 437 aa9.64□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Phkg2Q9DB30 406 aa9.64□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Card6E9PWH2 1175 aa9.63□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Zbtb21E9Q444 1094 aa9.63□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Rufy1Q8BIJ7 712 aa9.63□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Pnpla2Q8BJ56 486 aa9.63□□□□□ -0.87
Bdnf-210ENSMUST00000111051 DymQ8CHY3 669 aa9.63□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Smc1bQ920F6 1248 aa9.63□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Pdzd9Q9D9M4 266 aa9.63□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Luc7l2Q7TNC4 392 aaKnown RBP9.63□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Rnf41Q8BH75 317 aa9.63□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Nlrp3Q8R4B8 1033 aa9.63□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Acsbg1Q99PU5 721 aa9.63□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Msh6P54276 1358 aaKnown RBP9.63□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Ercc3P49135 783 aa9.63□□□□□ -0.87
Bdnf-210ENSMUST00000111051 DbnlQ62418 436 aa9.63□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Necab1Q8BG18 352 aa9.63□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Ubxn10Q8BG34 277 aa9.63□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Ces1hD3Z298 562 aa9.63□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Prl3d2F6R3P9 224 aa9.63□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Atp2b1G5E829 1220 aa9.63□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Cep63Q3UPP8 700 aa9.63□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Usp28Q5I043 1051 aa9.63□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Tpcn2Q8BWC0 731 aa9.63□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Zfp317Q8C0Q5 607 aa9.63□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Atad2Q8CDM1 1040 aa9.63□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Frat2Q8K025 231 aa9.63□□□□□ -0.87
Bdnf-210ENSMUST00000111051 ZgpatQ8VDM1 511 aa9.63□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Ccdc83Q9D4V3 305 aa9.63□□□□□ -0.87
Bdnf-210ENSMUST00000111051 AglF8VPN4 1532 aa9.62□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Ica1lQ3TY65 431 aa9.62□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Lins1Q3U1D0 764 aa9.62□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Rassf4Q8CB96 322 aa9.62□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Pcdhb22Q91XZ8 794 aa9.62□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Ssr1Q9CY50 286 aaKnown RBP9.62□□□□□ -0.87
Bdnf-210ENSMUST00000111051 TnksQ6PFX9 1320 aa9.62□□□□□ -0.87
Bdnf-210ENSMUST00000111051 RereQ80TZ9 1558 aa9.62□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Tbc1d8bA3KGB4 1114 aa9.62□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Epb41l2O70318 988 aaKnown RBP9.62□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Rad23bP54728 416 aa9.62□□□□□ -0.87
Bdnf-210ENSMUST00000111051 L1td1Q587J6 782 aaKnown RBP9.62□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Dhx38Q80X98 1228 aa9.62□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Ints4Q8CIM8 964 aa9.62□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 21.8 ms