RNA–Protein interactions for RNA: ENSMUST00000111049.8

Bdnf-208, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,830 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-208ENSMUST00000111049 Paxbp1P58501 919 aa9.56□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Sp8Q8BMJ8 486 aa9.56□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Ppp4r3bQ922R5 820 aa9.56□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Fam213aQ9CYH2 218 aa9.56□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Arfgef2A2A5R2 1792 aa9.56□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Nup153E9Q3G8 1462 aaKnown RBP9.56□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Nkx2-3P97334 362 aa9.56□□□□□ -0.88
Bdnf-208ENSMUST00000111049 NpeppsQ11011 920 aa9.56□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Zbtb40Q6PCS8 1258 aa9.56□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Usp44Q8C2S0 711 aa9.56□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Mb21d2Q8C525 428 aa9.56□□□□□ -0.88
Bdnf-208ENSMUST00000111049 SdsQ8VBT2 327 aa9.56□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Clstn1Q9EPL2 979 aa9.56□□□□□ -0.88
Bdnf-208ENSMUST00000111049 NalcnQ8BXR5 1738 aa9.56□□□□□ -0.88
Bdnf-208ENSMUST00000111049 TnksQ6PFX9 1320 aa9.56□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Mst1rQ62190 1378 aa9.56□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Atp2b1G5E829 1220 aa9.56□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Ms4a1P19437 291 aa9.56□□□□□ -0.88
Bdnf-208ENSMUST00000111049 RubcnlQ3TD16 648 aa9.56□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Atad2Q8CDM1 1040 aa9.56□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Inpp5bQ8K337 993 aa9.56□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Mical1Q8VDP3 1048 aa9.56□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Tbc1d7Q9D0K0 293 aa9.56□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Kiaa0232Q80U59 1396 aaKnown RBP9.55□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Card6E9PWH2 1175 aa9.55□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Zscan29E9Q5B4 869 aa9.55□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Prl3d2F6R3P9 224 aa9.55□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Mtx1P47802 317 aa9.55□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Agtpbp1Q641K1 1218 aa9.55□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Slain2Q8CI08 581 aa9.55□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Krt84Q99M73 603 aa9.55□□□□□ -0.88
Bdnf-208ENSMUST00000111049 MypnQ5DTJ9 1315 aa9.55□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Kansl3A2RSY1 903 aaKnown RBP9.55□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Spag5Q7TME2 1165 aa9.55□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Naa16Q9DBB4 864 aa9.55□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Ahnak2E9PYB0 1738 aaKnown RBP9.55□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Aox4Q3TYQ9 1336 aa9.55□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Card10P58660 1021 aa9.55□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Ccdc129Q14B48 1034 aa9.55□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Ccdc102aQ3TMW1 549 aa9.55□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Tns3Q5SSZ5 1440 aa9.54□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Ubap1lG3UW59 384 aa9.54□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Hmx1O70218 332 aa9.54□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Igflr1Q3U4N7 345 aa9.54□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Abcf1Q6P542 837 aaKnown RBP9.54□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Smarcc2Q6PDG5 1213 aa9.54□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Ccz1Q8C1Y8 480 aa9.54□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Ptcd1Q8C2E4 695 aaKnown RBP9.54□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Pdia6Q922R8 440 aaKnown RBP9.54□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Gnl2Q99LH1 728 aaKnown RBP9.54□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Npc1l1Q6T3U4 1333 aa9.54□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Metap2O08663 478 aaKnown RBP9.54□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Bag1Q60739 355 aa9.54□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Cnot6lQ8VEG6 555 aa9.54□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Nop2Q922K7 793 aaKnown RBP9.54□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Acot9Q9R0X4 439 aaKnown RBP9.54□□□□□ -0.88
Bdnf-208ENSMUST00000111049 A0A1L1SQF0 893 aa9.54□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Znf568E9PYI1 671 aa9.54□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Cdk4P30285 303 aa9.54□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Washc4Q3UMB9 1173 aa9.54□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Zfp91Q62511 572 aa9.54□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Xpo4Q9ESJ0 1151 aa9.54□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Usp42B2RQC2 1324 aaKnown RBP9.54□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Kdm3aQ6PCM1 1323 aa9.54□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Zbtb21E9Q444 1094 aa9.53□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Dnm1P39053 867 aa9.53□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Igfbp6P47880 238 aa9.53□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Dnajc2P54103 621 aaKnown RBP9.53□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Kcna6Q61923 529 aa9.53□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Tshz2Q68FE9 1030 aa9.53□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Fam160b2Q80YR2 744 aa9.53□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Arid5bQ8BM75 1188 aaKnown RBP9.53□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Smc2Q8CG48 1191 aaKnown RBP9.53□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Ddx27Q921N6 760 aaKnown RBP9.53□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Riok1Q922Q2 567 aa9.53□□□□□ -0.88
Bdnf-208ENSMUST00000111049 NefhP19246 1090 aa9.53□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Gm28047Q3US59 414 aa9.53□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Zfp202Q8C879 641 aa9.53□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Yeats4Q9CR11 227 aaKnown RBP9.53□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Zeb2Q9R0G7 1215 aa9.53□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Sos2Q02384 1333 aa9.53□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Chd2E9PZM4 1827 aaKnown RBP9.53□□□□□ -0.88
Bdnf-208ENSMUST00000111049 GmnnO88513 206 aa9.53□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Anp32eP97822 260 aaKnown RBP9.53□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Atp2b3Q0VF55 1220 aa9.53□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Drc7Q6V3W6 876 aa9.53□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Cep120Q7TSG1 988 aa9.53□□□□□ -0.88
Bdnf-208ENSMUST00000111049 DymQ8CHY3 669 aa9.53□□□□□ -0.88
Bdnf-208ENSMUST00000111049 GptQ8QZR5 496 aa9.53□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Trim11Q99PQ2 467 aa9.53□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Tpcn2Q8BWC0 731 aa9.52□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Zbtb43Q9DAI4 467 aa9.52□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Appbp2Q9DAX9 585 aa9.52□□□□□ -0.88
Bdnf-208ENSMUST00000111049 Col15a1O35206 1367 aa9.52□□□□□ -0.88
Bdnf-208ENSMUST00000111049 TsksO54887 585 aa9.52□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Trim56Q80VI1 734 aaKnown RBP9.52□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Acnat2Q8BGG9 420 aa9.52□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Ccdc150Q8CDI7 1110 aa9.52□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Nlrp3Q8R4B8 1033 aa9.52□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Mon2Q80TL7 1715 aa9.52□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 37.4 ms