RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 FktnQ8R507 461 aa27.35■■□□□ 1.97
Scn1b-201ENSMUST00000098548 Myoz2Q9JJW5 264 aa27.35■■□□□ 1.97
Scn1b-201ENSMUST00000098548 Gm4340L7N2C4 268 aa27.35■■□□□ 1.97
Scn1b-201ENSMUST00000098548 Sept1P42209 366 aa27.35■■□□□ 1.97
Scn1b-201ENSMUST00000098548 Nrxn2E9Q7X7 1710 aa27.34■■□□□ 1.97
Scn1b-201ENSMUST00000098548 Slc4a1P04919 929 aa27.34■■□□□ 1.97
Scn1b-201ENSMUST00000098548 Asap2Q7SIG6 958 aa27.34■■□□□ 1.97
Scn1b-201ENSMUST00000098548 Htatsf1Q8BGC0 757 aa27.34■■□□□ 1.97
Scn1b-201ENSMUST00000098548 ParvgQ9ERD8 331 aa27.34■■□□□ 1.97
Scn1b-201ENSMUST00000098548 Fam228bQ497Q6 232 aa27.33■■□□□ 1.97
Scn1b-201ENSMUST00000098548 Skor1Q8BX46 964 aa27.33■■□□□ 1.97
Scn1b-201ENSMUST00000098548 Kdm4cQ8VCD7 1054 aa27.33■■□□□ 1.97
Scn1b-201ENSMUST00000098548 Taf5lQ91WQ5 589 aa27.33■■□□□ 1.97
Scn1b-201ENSMUST00000098548 Rhbdl3P58873 404 aa27.32■■□□□ 1.96
Scn1b-201ENSMUST00000098548 Mrps27Q8BK72 415 aaKnown RBP27.32■■□□□ 1.96
Scn1b-201ENSMUST00000098548 TsksO54887 585 aa27.31■■□□□ 1.96
Scn1b-201ENSMUST00000098548 Anapc15P60007 132 aa27.31■■□□□ 1.96
Scn1b-201ENSMUST00000098548 Tfip11Q9ERA6 838 aaKnown RBP27.31■■□□□ 1.96
Scn1b-201ENSMUST00000098548 Unc5clQ6R653 518 aa27.31■■□□□ 1.96
Scn1b-201ENSMUST00000098548 Ift57Q8BXG3 429 aa27.31■■□□□ 1.96
Scn1b-201ENSMUST00000098548 Kcnq5Q9JK45 933 aa27.31■■□□□ 1.96
Scn1b-201ENSMUST00000098548 Myh15E9Q264 1925 aa27.29■■□□□ 1.96
Scn1b-201ENSMUST00000098548 Brf1Q8CFK2 676 aa27.29■■□□□ 1.96
Scn1b-201ENSMUST00000098548 Ccdc51Q3URS9 406 aa27.28■■□□□ 1.96
Scn1b-201ENSMUST00000098548 Kiaa0753Q6A000 959 aa27.28■■□□□ 1.96
Scn1b-201ENSMUST00000098548 Znf428Q8C1M2 176 aa27.28■■□□□ 1.96
Scn1b-201ENSMUST00000098548 Irs4Q9Z0Y7 1216 aa27.28■■□□□ 1.96
Scn1b-201ENSMUST00000098548 Cyp2c68K7N6C2 491 aa27.27■■□□□ 1.96
Scn1b-201ENSMUST00000098548 Fchsd1Q6PFY1 688 aa27.26■■□□□ 1.96
Scn1b-201ENSMUST00000098548 Sept9Q80UG5 583 aa27.26■■□□□ 1.95
Scn1b-201ENSMUST00000098548 Flt1P35969 1333 aa27.26■■□□□ 1.95
Scn1b-201ENSMUST00000098548 Myh4Q5SX39 1939 aa27.25■■□□□ 1.95
Scn1b-201ENSMUST00000098548 D830030K20RikE9PYQ5 218 aa27.25■■□□□ 1.95
Scn1b-201ENSMUST00000098548 Gm3043K7N693 218 aa27.25■■□□□ 1.95
Scn1b-201ENSMUST00000098548 Gm16440K7N6G6 218 aa27.25■■□□□ 1.95
Scn1b-201ENSMUST00000098548 Gm2244L7N2A3 218 aa27.25■■□□□ 1.95
Scn1b-201ENSMUST00000098548 Gm3278L7N2D2 218 aa27.25■■□□□ 1.95
Scn1b-201ENSMUST00000098548 Gm8271L7N2E2 218 aa27.25■■□□□ 1.95
Scn1b-201ENSMUST00000098548 ArxO35085 564 aa27.25■■□□□ 1.95
Scn1b-201ENSMUST00000098548 Terf2O35144 541 aa27.25■■□□□ 1.95
Scn1b-201ENSMUST00000098548 Col5a2Q3U962 1497 aa27.25■■□□□ 1.95
Scn1b-201ENSMUST00000098548 Vps54Q5SPW0 977 aa27.25■■□□□ 1.95
Scn1b-201ENSMUST00000098548 Ddx11Q6AXC6 880 aa27.25■■□□□ 1.95
Scn1b-201ENSMUST00000098548 Tmem266Q8BZB3 538 aa27.25■■□□□ 1.95
Scn1b-201ENSMUST00000098548 Plekhg6Q8R0J1 787 aa27.25■■□□□ 1.95
Scn1b-201ENSMUST00000098548 Mrpl12Q9DB15 201 aaKnown RBP27.25■■□□□ 1.95
Scn1b-201ENSMUST00000098548 Pde3aQ9Z0X4 1141 aa27.25■■□□□ 1.95
Scn1b-201ENSMUST00000098548 Setdb1O88974 1307 aa27.24■■□□□ 1.95
Scn1b-201ENSMUST00000098548 SnrkQ8VDU5 748 aa27.24■■□□□ 1.95
Scn1b-201ENSMUST00000098548 Carmil3Q3UFQ8 1375 aa27.23■■□□□ 1.95
Scn1b-201ENSMUST00000098548 Ankrd63A2ARS0 390 aa27.23■■□□□ 1.95
Scn1b-201ENSMUST00000098548 Ppfia1B2RXQ2 1266 aa27.23■■□□□ 1.95
Scn1b-201ENSMUST00000098548 AnlnQ8K298 1121 aaKnown RBP27.23■■□□□ 1.95
Scn1b-201ENSMUST00000098548 Csrnp1P59054 583 aa27.22■■□□□ 1.95
Scn1b-201ENSMUST00000098548 Nlrp9aQ66X03 949 aa27.22■■□□□ 1.95
Scn1b-201ENSMUST00000098548 Dpf2Q61103 391 aaKnown RBP27.22■■□□□ 1.95
Scn1b-201ENSMUST00000098548 Gjd4Q8BSD4 364 aa27.22■■□□□ 1.95
Scn1b-201ENSMUST00000098548 Smarce1O54941 411 aaKnown RBP27.21■■□□□ 1.95
Scn1b-201ENSMUST00000098548 CalcaP70160 136 aa27.21■■□□□ 1.95
Scn1b-201ENSMUST00000098548 Prune1Q8BIW1 454 aa27.21■■□□□ 1.95
Scn1b-201ENSMUST00000098548 EngaseQ8BX80 734 aa27.21■■□□□ 1.95
Scn1b-201ENSMUST00000098548 Krt25Q8VCW2 446 aa27.21■■□□□ 1.95
Scn1b-201ENSMUST00000098548 Pram1Q6BCL1 675 aa27.2■■□□□ 1.94
Scn1b-201ENSMUST00000098548 Ltv1Q6NSQ7 470 aaKnown RBP27.2■■□□□ 1.94
Scn1b-201ENSMUST00000098548 Sgip1Q8VD37 806 aa27.2■■□□□ 1.94
Scn1b-201ENSMUST00000098548 PhaxQ9JJT9 385 aaKnown RBP27.2■■□□□ 1.94
Scn1b-201ENSMUST00000098548 Fam83bQ0VBM2 1012 aa27.19■■□□□ 1.94
Scn1b-201ENSMUST00000098548 Gpr162Q3UN16 588 aa27.19■■□□□ 1.94
Scn1b-201ENSMUST00000098548 Il1rapl2Q9ERS6 686 aa27.19■■□□□ 1.94
Scn1b-201ENSMUST00000098548 Stk3Q9JI10 497 aa27.19■■□□□ 1.94
Scn1b-201ENSMUST00000098548 Kcna3P16390 528 aa27.18■■□□□ 1.94
Scn1b-201ENSMUST00000098548 ZyxQ62523 564 aa27.18■■□□□ 1.94
Scn1b-201ENSMUST00000098548 LlphQ9D945 130 aaKnown RBP27.18■■□□□ 1.94
Scn1b-201ENSMUST00000098548 Letm1Q9Z2I0 738 aa27.18■■□□□ 1.94
Scn1b-201ENSMUST00000098548 Rbbp6P97868 1790 aaKnown RBP27.18■■□□□ 1.94
Scn1b-201ENSMUST00000098548 TnksQ6PFX9 1320 aa27.18■■□□□ 1.94
Scn1b-201ENSMUST00000098548 Gm5592Q3V0A6 857 aa27.18■■□□□ 1.94
Scn1b-201ENSMUST00000098548 Top1mtQ8R4U6 593 aa27.18■■□□□ 1.94
Scn1b-201ENSMUST00000098548 Arfgef1G3X9K3 1846 aaKnown RBP27.18■■□□□ 1.94
Scn1b-201ENSMUST00000098548 Rad50P70388 1312 aa27.17■■□□□ 1.94
Scn1b-201ENSMUST00000098548 Vsig10D3YX43 558 aa27.17■■□□□ 1.94
Scn1b-201ENSMUST00000098548 Prl3d1P18121 224 aa27.17■■□□□ 1.94
Scn1b-201ENSMUST00000098548 Rsph3aQ3UFY4 516 aa27.17■■□□□ 1.94
Scn1b-201ENSMUST00000098548 Fam160b2Q80YR2 744 aa27.17■■□□□ 1.94
Scn1b-201ENSMUST00000098548 Atp6v1dP57746 247 aa27.16■■□□□ 1.94
Scn1b-201ENSMUST00000098548 Glis3Q6XP49 780 aa27.16■■□□□ 1.94
Scn1b-201ENSMUST00000098548 Slc44a4Q91VA1 707 aa27.16■■□□□ 1.94
Scn1b-201ENSMUST00000098548 Mapkapk5O54992 473 aa27.15■■□□□ 1.94
Scn1b-201ENSMUST00000098548 Terf1P70371 421 aa27.15■■□□□ 1.94
Scn1b-201ENSMUST00000098548 EspnlQ3UYR4 1005 aa27.15■■□□□ 1.94
Scn1b-201ENSMUST00000098548 Ddx46Q569Z5 1032 aaKnown RBP27.15■■□□□ 1.94
Scn1b-201ENSMUST00000098548 Abtb2Q7TQI7 1024 aa27.15■■□□□ 1.94
Scn1b-201ENSMUST00000098548 Riok1Q922Q2 567 aa27.15■■□□□ 1.94
Scn1b-201ENSMUST00000098548 Izumo3A6PWV3 263 aa27.14■■□□□ 1.94
Scn1b-201ENSMUST00000098548 Mtmr2Q9Z2D1 643 aa27.14■■□□□ 1.94
Scn1b-201ENSMUST00000098548 Zkscan16A2ALW2 728 aa27.14■■□□□ 1.93
Scn1b-201ENSMUST00000098548 Cyp3a57D3YYZ0 503 aa27.14■■□□□ 1.93
Scn1b-201ENSMUST00000098548 AaasP58742 546 aa27.14■■□□□ 1.93
Scn1b-201ENSMUST00000098548 Golim4Q8BXA1 655 aa27.14■■□□□ 1.93
Scn1b-201ENSMUST00000098548 WdpcpQ8C456 722 aa27.14■■□□□ 1.93
Retrieved 100 of 22,080 RNA–protein pairs in 366.1 ms