RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Chmp4cQ9D7F7 232 aa11.97□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Cyp3a57D3YYZ0 503 aa11.97□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Cyp2c69E9PXC3 491 aa11.97□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Zbtb7aO88939 569 aaKnown RBP11.97□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Cyp2c40P56657 491 aa11.97□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Rbm15bQ6PHZ5 887 aaKnown RBP11.97□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Znf18Q810A1 556 aa11.97□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Cfap69Q8BH53 942 aa11.97□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Spire2Q8K1S6 718 aa11.97□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Top1mtQ8R4U6 593 aa11.97□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Myo3bQ1EG27 1305 aa11.97□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Ankrd63A2ARS0 390 aa11.96□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Csf1rP09581 977 aa11.96□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Ercc3P49135 783 aa11.96□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Ccdc51Q3URS9 406 aa11.96□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Mxd3Q80US8 206 aa11.96□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Gpr150Q8BL07 427 aa11.96□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Pet2A2AHY8 747 aa11.96□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 Fbxo3Q9DC63 480 aa11.96□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 Greb1lB9EJV3 1913 aa11.96□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 Hoxa7P02830 229 aa11.96□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 Rhbdl3P58873 404 aa11.96□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 Anapc15-psA0A140T8L6 141 aa11.95□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 Ppfia1B2RXQ2 1266 aa11.95□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 CrcpO35427 148 aa11.95□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 Sept12Q9D451 317 aa11.95□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 Mroh6V9GX81 722 aa11.95□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 A0A1W2P7S8 802 aa11.95□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 Gm5592Q3V0A6 857 aa11.95□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 Cdcp1Q5U462 833 aa11.95□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 Cdc5lQ6A068 802 aaKnown RBP11.95□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 Gtf2iQ9ESZ8 998 aaKnown RBP11.95□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 Plch1Q4KWH5 1682 aa11.95□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 Kcnq2Q9Z351 759 aa11.95□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 Tbc1d4Q8BYJ6 1307 aa11.95□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 Magea1O89006 320 aa11.94□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 Magea5O89009 320 aa11.94□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 Spg7Q3ULF4 781 aa11.94□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 Ppm1gQ61074 542 aa11.94□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 PrimpolQ6P1E7 537 aa11.94□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 Magea2Q9R2A2 320 aa11.94□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 Ambra1A2AH22 1300 aa11.94□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 Mlh1Q9JK91 760 aa11.94□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 Large2Q5XPT3 690 aa11.93□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 Ube3bQ9ES34 1070 aa11.93□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 ChgaP26339 463 aaKnown RBP11.93□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 Abtb2Q7TQI7 1024 aa11.93□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 Tgfb2P27090 414 aa11.93□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 Trim56Q80VI1 734 aaKnown RBP11.93□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 Skor1Q8BX46 964 aa11.93□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 Kcnq3Q8K3F6 873 aa11.93□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 Erc1Q99MI1 1120 aa11.93□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 MthfsQ9D110 203 aa11.93□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 Znfx1Q8R151 1909 aaKnown RBP11.93□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 MccE9PWI3 1003 aa11.92□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 Ube3cQ80U95 1083 aa11.92□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 Slc44a4Q91VA1 707 aa11.92□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 PhaxQ9JJT9 385 aaKnown RBP11.92□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 Ptf1aQ9QX98 324 aa11.92□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 Togaram1Q6A070 1776 aaKnown RBP11.92□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 Tuft1O08970 390 aa11.92□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 Stat5bP42232 786 aa11.92□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 IcoslgQ9JHJ8 322 aa11.92□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 Mtmr2Q9Z2D1 643 aa11.92□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 Map10Q8BJS7 891 aa11.91□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 Uba5Q8VE47 403 aa11.91□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 Pmfbp1Q9WVQ0 1022 aa11.91□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 Fam71e1A1L3C1 212 aa11.91□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 Phactr2B1AVP0 632 aa11.91□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 Nedd4P46935 887 aaKnown RBP11.91□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 Tbc1d32Q3URV1 1296 aa11.91□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 Hand2Q61039 217 aa11.91□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 ZyxQ62523 564 aa11.91□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 Edrf1Q6GQV7 1239 aa11.91□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 AidaQ8C4Q6 305 aa11.91□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 Clstn1Q9EPL2 979 aa11.91□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 Lrp5Q91VN0 1614 aa11.91□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 Abl1P00520 1123 aa11.91□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 Cyp24a1Q64441 514 aa11.9□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 Rnaseh2aQ9CWY8 301 aa11.9□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 FliiQ9JJ28 1271 aa11.9□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 Krt24A1L317 512 aa11.9□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 Cyp2d10P24456 504 aa11.9□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 Fam170aQ66LM6 333 aa11.9□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 Ppp4r3bQ922R5 820 aa11.9□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 Stag1Q9D3E6 1258 aa11.9□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 Zswim8Q3UHH1 1832 aaKnown RBP11.9□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 Heg1E9Q7X6 1337 aa11.9□□□□□ -0.5
Ccdc38-201ENSMUST00000092215 Pcsk7Q61139 770 aa11.9□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Best3Q6H1V1 669 aa11.9□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Npc1l1Q6T3U4 1333 aa11.9□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 HdlbpQ8VDJ3 1268 aaKnown RBP11.89□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Appbp2Q9DAX9 585 aa11.89□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Mtcl1Q3UHU5 1945 aa11.89□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Rbm8a2A0A0N4SUH6 174 aa11.89□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Ifit2Q64112 472 aa11.89□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Rbm8aQ9CWZ3 174 aa11.89□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Ppil4Q9CXG3 492 aaKnown RBP11.89□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Agtpbp1Q641K1 1218 aa11.89□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Glis3Q6XP49 780 aa11.89□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 30.7 ms