RNA–Protein interactions for RNA: ENSMUST00000089332.4

Col8a1-201, Transcript of Collagen alpha-1(VIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col8a1, Length 5,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1-201ENSMUST00000089332 Ifit2Q64112 472 aa13.77□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Nap1l4Q78ZA7 375 aaKnown RBP13.77□□□□□ -0.21
Col8a1-201ENSMUST00000089332 IqcgQ80W32 419 aa13.77□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Klhl30Q8C3F7 581 aa13.77□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Spocd1B1ASB6 936 aa13.77□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Slc39a6Q8C145 765 aa13.77□□□□□ -0.21
Col8a1-201ENSMUST00000089332 AmfrQ9R049 643 aa13.77□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Dzip1lQ499E4 774 aa13.76□□□□□ -0.21
Col8a1-201ENSMUST00000089332 TrhQ62361 256 aa13.76□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Rufy3Q9D394 469 aa13.76□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Txnrd1Q9JMH6 613 aa13.76□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Prl3d2F6R3P9 224 aa13.76□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Cfap73J3QPZ5 306 aa13.76□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Iffo1Q8BXL9 562 aa13.76□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Nlgn1Q99K10 843 aa13.76□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Ptch1Q61115 1434 aa13.76□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Chmp6P0C0A3 200 aa13.76□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Nucb2P81117 420 aa13.76□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Zkscan8Q8BSL0 588 aa13.76□□□□□ -0.21
Col8a1-201ENSMUST00000089332 2310002L09RikQ9D7L5 217 aa13.76□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Phkg2Q9DB30 406 aa13.76□□□□□ -0.21
Col8a1-201ENSMUST00000089332 TnksQ6PFX9 1320 aa13.76□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Snapc4Q8BP86 1333 aa13.76□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Cfap157Q0VFX2 523 aa13.76□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Exoc8Q6PGF7 716 aa13.76□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Syce1Q9D495 329 aa13.76□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Pde1cQ64338 706 aa13.75□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Tti2Q8BGV4 512 aa13.75□□□□□ -0.21
Col8a1-201ENSMUST00000089332 StambpQ9CQ26 424 aa13.75□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Snap23O09044 210 aa13.75□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Ercc3P49135 783 aa13.75□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Gm12185Q5NCB2 835 aa13.75□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Morc2aQ69ZX6 1030 aa13.75□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Setdb1O88974 1307 aa13.75□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Tagap1P0CAX8 505 aa13.75□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Fgfr1opQ66JX5 399 aa13.75□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Luc7l2Q7TNC4 392 aaKnown RBP13.75□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Rlbp1Q9Z275 317 aa13.75□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Stk36Q69ZM6 1316 aa13.75□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Mast1Q9R1L5 1570 aa13.74□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Gm4758L7N258 96 aa13.74□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Mx1P09922 631 aa13.74□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Ccdc42Q5SV66 316 aa13.74□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Kif5bQ61768 963 aa13.74□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Cep135Q6P5D4 1140 aa13.74□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Mmp8O70138 465 aa13.74□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Syt1P46096 421 aa13.74□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Podxl2Q8CAE9 603 aa13.74□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Hfm1D3Z4R1 1434 aa13.74□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Qtrt2B8ZXI1 415 aa13.74□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Gm42641I6L9G2 585 aa13.74□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Hdhd2Q3UGR5 259 aa13.74□□□□□ -0.21
Col8a1-201ENSMUST00000089332 MycbpapQ5SUV2 932 aa13.74□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Kcna6Q61923 529 aa13.74□□□□□ -0.21
Col8a1-201ENSMUST00000089332 AtripQ8BMG1 785 aa13.74□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Pdcl2Q78Y63 240 aa13.74□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Cyp4f39Q8BGU0 532 aa13.74□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Prdm11A2AGX3 565 aa13.73□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Card10P58660 1021 aa13.73□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Zbtb45Q52KG4 520 aa13.73□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Snx13Q6PHS6 957 aa13.73□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Rab3gap1Q80UJ7 981 aa13.73□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Krt7Q9DCV7 457 aa13.73□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Efcab6Q6P1E8 1516 aa13.73□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Erbb3Q61526 1339 aa13.73□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Sult6b1P0CC03 303 aa13.73□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Smarcad1Q04692 1021 aa13.73□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Esyt1Q3U7R1 1092 aaKnown RBP13.73□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Bbof1Q3V079 533 aa13.73□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Exoc3Q6KAR6 755 aa13.73□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Miga2Q8BK03 593 aa13.73□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Gtf3c5Q8R2T8 520 aa13.73□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Gm30191A0A0U1RNT7 187 aa13.73□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Ccdc170D3YXL0 722 aa13.73□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Vps18Q8R307 973 aa13.73□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Bloc1s4Q8VED2 215 aa13.73□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Vps54Q5SPW0 977 aa13.73□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Tmx4Q8C0L0 335 aa13.73□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Eid1Q9DCR4 169 aa13.73□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Uso1Q9Z1Z0 959 aaKnown RBP13.73□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Parp1P11103 1013 aaKnown RBP13.72□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Ankrd40Q5SUE8 363 aa13.72□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Pdzrn3Q69ZS0 1063 aa13.72□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Ccdc113Q8C5T8 377 aa13.72□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Akr1c19G3X9Y6 323 aa13.72□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Idi1P58044 227 aa13.72□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Ctr9Q62018 1173 aaKnown RBP13.72□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Tubb4aQ9D6F9 444 aa13.72□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Gm16486A0A1D5RMD1 1434 aa13.72□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Gm10378F6XQQ1 160 aa13.72□□□□□ -0.21
Col8a1-201ENSMUST00000089332 TsksO54887 585 aa13.72□□□□□ -0.21
Col8a1-201ENSMUST00000089332 LdhaP06151 332 aaKnown RBP13.72□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Pcdhb22Q91XZ8 794 aa13.72□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Ccdc105Q9D4K7 499 aa13.72□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Gdpd2Q9ESM6 539 aa13.72□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Traf1P39428 409 aa13.72□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Atg3Q9CPX6 314 aa13.72□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Abca5Q8K448 1642 aa13.71□□□□□ -0.21
Col8a1-201ENSMUST00000089332 Atp2b1G5E829 1220 aa13.71□□□□□ -0.21
Col8a1-201ENSMUST00000089332 9230110C19RikQ8CC70 267 aa13.71□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 74.7 ms