RNA–Protein interactions for RNA: ENSMUST00000088973.10

Smarca1-202, Transcript of Probable global transcription activator SNF2L1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Smarca1, Length 4,798 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1-202ENSMUST00000088973 Ubash3aQ3V3E1 624 aa11.37□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Fermt2Q8CIB5 680 aa11.37□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Xrcc4Q924T3 326 aa11.37□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Yeats4Q9CR11 227 aaKnown RBP11.37□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Atp12aQ9Z1W8 1035 aa11.37□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Olfm5Q8BU90 496 aa11.37□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Egfem1Q8C088 590 aa11.37□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Vps37cQ8R105 352 aa11.37□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Nlgn1Q99K10 843 aa11.37□□□□□ -0.59
Smarca1-202ENSMUST00000088973 PalldQ9ET54 1408 aa11.37□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Gm30191A0A0U1RNT7 187 aa11.37□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Il4rP16382 810 aa11.37□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Pex1Q5BL07 1284 aa11.37□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Ccdc148Q6P5U8 527 aa11.37□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Edc3Q8K2D3 508 aaKnown RBP11.37□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Ppp1r3fQ9JIG4 799 aa11.37□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Tacc2Q9JJG0 1149 aa11.37□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Cdk13Q69ZA1 1511 aaKnown RBP11.37□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Atg4a-psA0A0G2JFS9 396 aa11.37□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Prr29B1ARI9 187 aa11.37□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Hmgb1P63158 215 aaKnown RBP11.37□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Prdm1Q60636 856 aa11.37□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Atg4aQ8C9S8 396 aa11.37□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Ccdc105Q9D4K7 499 aa11.37□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Lrrc9Q8CDN9 1456 aa11.37□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Snrpa1P57784 255 aaKnown RBP11.36□□□□□ -0.59
Smarca1-202ENSMUST00000088973 CpvlQ9D3S9 478 aa11.36□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Mast3Q3U214 1321 aa11.36□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Nlrp2Q4PLS0 1046 aaKnown RBP11.36□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Nsrp1Q5NCR9 542 aa11.36□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Kank4Q6P9J5 1016 aa11.36□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Rps6kb1Q8BSK8 525 aa11.36□□□□□ -0.59
Smarca1-202ENSMUST00000088973 SltmQ8CH25 1031 aaKnown RBP11.36□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Tmod2Q9JKK7 351 aa11.36□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Cabp5Q9JLK3 173 aa11.36□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Cnpy2Q9QXT0 182 aa11.36□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Gm29094F6Q785 221 aa11.36□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Gm10378F6XQQ1 160 aa11.36□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Smarcc2Q6PDG5 1213 aa11.36□□□□□ -0.59
Smarca1-202ENSMUST00000088973 SfpqQ8VIJ6 699 aaKnown RBP11.36□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Erbb3Q61526 1339 aa11.36□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Myl10Q62082 202 aa11.36□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Miga2Q8BK03 593 aa11.36□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Usp37Q8C0R0 979 aa11.36□□□□□ -0.59
Smarca1-202ENSMUST00000088973 BbxQ8VBW5 907 aa11.36□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Cd274Q9EP73 290 aa11.36□□□□□ -0.59
Smarca1-202ENSMUST00000088973 WizO88286 1684 aaKnown RBP11.36□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Igbp1Q61249 340 aa11.35□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Hs6st3Q9QYK4 470 aa11.35□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Gm1993A6X8I0 212 aa11.35□□□□□ -0.59
Smarca1-202ENSMUST00000088973 SlxD3Z347 212 aa11.35□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Serpinc1P32261 465 aa11.35□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Neurog2P70447 263 aa11.35□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Txnrd1Q9JMH6 613 aa11.35□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Znf394Q9Z1D9 521 aa11.35□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Cyp2ab1S4R196 498 aa11.35□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Stk36Q69ZM6 1316 aa11.35□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Sult6b1P0CC03 303 aa11.35□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Psmb7P70195 277 aa11.35□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Top1Q04750 767 aaKnown RBP11.35□□□□□ -0.59
Smarca1-202ENSMUST00000088973 SdsQ8VBT2 327 aa11.35□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Kdm4cQ8VCD7 1054 aa11.35□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Edc4Q3UJB9 1406 aaKnown RBP11.35□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Gm28919A0A087WP35 240 aa11.35□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Gna11P21278 359 aa11.35□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Ccdc162pQ0VG85 912 aa11.35□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Itga6Q61739 1091 aa11.35□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Znf428Q8C1M2 176 aa11.35□□□□□ -0.59
Smarca1-202ENSMUST00000088973 ClasrpQ8CFC7 668 aa11.35□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Tut1Q8R3F9 869 aa11.35□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Tex19.1Q99MV2 351 aa11.35□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Bin2D3Z6Q9 489 aa11.34□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Naa16Q9DBB4 864 aa11.34□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Dennd4bQ3U1Y4 1499 aa11.34□□□□□ -0.59
Smarca1-202ENSMUST00000088973 TsksO54887 585 aa11.34□□□□□ -0.59
Smarca1-202ENSMUST00000088973 HellsQ60848 821 aa11.34□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Esco1Q69Z69 843 aa11.34□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Tubb4aQ9D6F9 444 aa11.34□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Plekhg2Q6KAU7 1340 aa11.34□□□□□ -0.59
Smarca1-202ENSMUST00000088973 TrdnE9Q9K5 693 aa11.34□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Ube3aO08759 870 aa11.34□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Eme2Q56A04 373 aa11.34□□□□□ -0.59
Smarca1-202ENSMUST00000088973 P4ha1Q60715 534 aa11.34□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Kif5bQ61768 963 aa11.34□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Tab2Q99K90 693 aa11.34□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Uso1Q9Z1Z0 959 aaKnown RBP11.34□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Prr16A3KMN5 304 aa11.33□□□□□ -0.59
Smarca1-202ENSMUST00000088973 4921504E06RikQ8CET2 560 aa11.33□□□□□ -0.59
Smarca1-202ENSMUST00000088973 ParnQ8VDG3 624 aa11.33□□□□□ -0.59
Smarca1-202ENSMUST00000088973 RtcbQ99LF4 505 aaKnown RBP11.33□□□□□ -0.59
Smarca1-202ENSMUST00000088973 Zhx1P70121 873 aa11.33□□□□□ -0.6
Smarca1-202ENSMUST00000088973 Appbp2Q9DAX9 585 aa11.33□□□□□ -0.6
Smarca1-202ENSMUST00000088973 Jdp2P97875 163 aa11.33□□□□□ -0.6
Smarca1-202ENSMUST00000088973 Psmd1Q3TXS7 953 aa11.33□□□□□ -0.6
Smarca1-202ENSMUST00000088973 Mdh1bQ5F204 500 aa11.33□□□□□ -0.6
Smarca1-202ENSMUST00000088973 Ttc14Q9CSP9 761 aa11.33□□□□□ -0.6
Smarca1-202ENSMUST00000088973 Lonrf3Q9D4H7 753 aa11.33□□□□□ -0.6
Smarca1-202ENSMUST00000088973 Pde3aQ9Z0X4 1141 aa11.33□□□□□ -0.6
Smarca1-202ENSMUST00000088973 Nfil3O08750 462 aa11.33□□□□□ -0.6
Smarca1-202ENSMUST00000088973 Anxa1P10107 346 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 27.6 ms