RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Smarcad1Q04692 1021 aa15.78■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Ubash3aQ3V3E1 624 aa15.78■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Smarcc2Q6PDG5 1213 aa15.78■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Rtn1Q8K0T0 780 aa15.78■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Ccdc91Q9D8L5 442 aa15.78■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Tldc2A2ACG1 198 aa15.78■□□□□ 0.12
Col3a1-201ENSMUST00000087883 GnpatP98192 678 aa15.78■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Agbl1Q09M05 972 aa15.78■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Znf18Q810A1 556 aa15.78■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Csrnp2Q8BGQ2 534 aa15.78■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Lmod1Q8BVA4 595 aa15.78■□□□□ 0.12
Col3a1-201ENSMUST00000087883 4921530L21RikQ9CQ47 274 aa15.78■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Pde4dQ01063 747 aa15.77■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Dennd3A2RT67 1274 aa15.77■□□□□ 0.12
Col3a1-201ENSMUST00000087883 AdnpQ9Z103 1108 aaKnown RBP15.77■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Fam135aQ6NS59 1506 aa15.77■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Ccdc57Q6PHN1 1016 aa15.77■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Acnat2Q8BGG9 420 aa15.77■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Lonp2Q9DBN5 852 aa15.77■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Elf2Q9JHC9 593 aa15.77■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Ankrd26Q811D2 1581 aa15.77■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Apol7aB2RT54 418 aa15.76■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Mtus1Q5HZI1 1210 aa15.76■□□□□ 0.11
Col3a1-201ENSMUST00000087883 PpanQ91YU8 470 aaKnown RBP15.76■□□□□ 0.11
Col3a1-201ENSMUST00000087883 NapgQ9CWZ7 312 aa15.76■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Zkscan16A2ALW2 728 aa15.76■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Atp2b3Q0VF55 1220 aa15.76■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Drc1Q3USS3 753 aa15.76■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Ppp4r3aQ6P2K6 820 aa15.76■□□□□ 0.11
Col3a1-201ENSMUST00000087883 MthfsQ9D110 203 aa15.76■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Golga5Q9QYE6 729 aa15.76■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Chmp6P0C0A3 200 aa15.76■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Nek11Q8C0Q4 628 aa15.76■□□□□ 0.11
Col3a1-201ENSMUST00000087883 BrapQ99MP8 591 aa15.76■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Atp12aQ9Z1W8 1035 aa15.76■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Gm1993A6X8I0 212 aa15.76■□□□□ 0.11
Col3a1-201ENSMUST00000087883 SlxD3Z347 212 aa15.76■□□□□ 0.11
Col3a1-201ENSMUST00000087883 GnaqP21279 359 aa15.76■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Grm8P47743 908 aa15.76■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Pank2Q3U4S0 443 aa15.76■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Acsbg1Q99PU5 721 aa15.76■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Ccdc105Q9D4K7 499 aa15.76■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Krt8P11679 490 aaKnown RBP15.75■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Prim1P20664 417 aa15.75■□□□□ 0.11
Col3a1-201ENSMUST00000087883 SsbP32067 415 aaKnown RBP15.75■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Ndufab1Q9CR21 156 aa15.75■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Clip2Q9Z0H8 1047 aa15.75■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Btn2a2A4QPC6 514 aa15.75■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Capn2O08529 700 aa15.75■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Mdm2P23804 489 aa15.75■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Psmc4P54775 418 aa15.75■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Fermt1P59113 677 aa15.75■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Trerf1Q8BXJ2 1205 aa15.75■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Tsr2Q8C8T8 191 aa15.75■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Clcn1Q64347 994 aa15.75■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Slx4Q6P1D7 1565 aa15.75■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Caskin1Q6P9K8 1431 aa15.75■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Depdc1bQ8BH88 529 aa15.75■□□□□ 0.11
Col3a1-201ENSMUST00000087883 HhatQ8BMT9 499 aa15.75■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Egfem1Q8C088 590 aa15.75■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Ubac1Q8VDI7 409 aa15.75■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Uba5Q8VE47 403 aa15.75■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Nop56Q9D6Z1 580 aaKnown RBP15.75■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Ccdc89Q9DA73 370 aa15.75■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Magi1Q6RHR9 1471 aa15.74■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Ddx49Q4FZF3 480 aaKnown RBP15.74■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Hook2Q7TMK6 716 aa15.74■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Usp37Q8C0R0 979 aa15.74■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Zkscan5Q9Z1D8 819 aa15.74■□□□□ 0.11
Col3a1-201ENSMUST00000087883 DroshaQ5HZJ0 1373 aaKnown RBP15.74■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Pex1Q5BL07 1284 aa15.74■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Pik3c2gO70167 1506 aa15.74■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Gpr161B2RPY5 545 aa15.74■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Myl3P09542 204 aa15.74■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Ncf1Q09014 390 aa15.74■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Ttll12Q3UDE2 639 aa15.74■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Plcd1Q8R3B1 756 aa15.74■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Synpo2Q91YE8 1087 aaKnown RBP15.74■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Rdm1Q9CQK3 281 aa15.74■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Rsph10bE9PYQ0 876 aa15.74■□□□□ 0.11
Col3a1-201ENSMUST00000087883 AU022751B1B0V2 589 aa15.73■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Gsta4P24472 222 aa15.73■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Igflr1Q3U4N7 345 aa15.73■□□□□ 0.11
Col3a1-201ENSMUST00000087883 P4ha1Q60715 534 aa15.73■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Cdr1E9Q0B4 517 aa15.73■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Stmn2P55821 179 aa15.73■□□□□ 0.11
Col3a1-201ENSMUST00000087883 ArsiQ32KI9 573 aa15.73■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Aimp1P31230 310 aaKnown RBP15.73■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Kdm1aQ6ZQ88 853 aa15.73■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Mcm7Q61881 719 aaKnown RBP15.73■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Anp32cQ64G17 123 aa15.73■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Cfap100Q80VN0 613 aa15.73■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Ccdc14Q8K2J4 934 aa15.73■□□□□ 0.11
Col3a1-201ENSMUST00000087883 TrdnE9Q9K5 693 aa15.73■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Tcp11l1Q8BTG3 509 aa15.73■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Arhgef6Q8K4I3 771 aa15.73■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Epb41l3Q9WV92 929 aa15.73■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Calm1P0DP26 149 aaKnown RBP15.72■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Calm2P0DP27 149 aaKnown RBP15.72■□□□□ 0.11
Col3a1-201ENSMUST00000087883 Calm3P0DP28 149 aaKnown RBP15.72■□□□□ 0.11
Retrieved 100 of 22,080 RNA–protein pairs in 23.9 ms