RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Tmem94Q7TSH8 1360 aa9.57□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Irgm2A0A140LIF8 407 aa9.57□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Znf568E9PYI1 671 aa9.57□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Kcnd1Q03719 651 aa9.57□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Arhgef1Q61210 920 aaKnown RBP9.57□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Dhx40Q6PE54 779 aaKnown RBP9.57□□□□□ -0.88
Cdc40-201ENSMUST00000044166 StrbpQ91WM1 672 aaKnown RBP9.57□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Sugt1Q9CX34 336 aa9.57□□□□□ -0.88
Cdc40-201ENSMUST00000044166 AceP09470 1312 aa9.57□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Panx2Q6IMP4 677 aa9.57□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Hnrnpul1Q8VDM6 859 aaKnown RBP9.57□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Casz1Q9CWL2 1761 aa9.56□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Jakmip2D3YXK0 820 aa9.56□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Lig3P97386 1015 aa9.56□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Btbd11Q6GQW0 1109 aa9.56□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Znf513Q6PD29 541 aa9.56□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Zkscan3Q91VW9 553 aa9.56□□□□□ -0.88
Cdc40-201ENSMUST00000044166 GzmnQ920S1 248 aa9.56□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Ccer1Q9CQL2 403 aa9.56□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Mrpl44Q9CY73 333 aaKnown RBP9.56□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Zcchc17Q9ESX4 241 aaKnown RBP9.56□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Ccdc121E9Q6D3 323 aa9.56□□□□□ -0.88
Cdc40-201ENSMUST00000044166 FosbP13346 338 aa9.56□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Nap1l2P51860 460 aa9.56□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Tmem132eQ6IEE6 982 aa9.56□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Ets1P27577 440 aa9.56□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Grm8P47743 908 aa9.56□□□□□ -0.88
Cdc40-201ENSMUST00000044166 GscQ02591 256 aa9.56□□□□□ -0.88
Cdc40-201ENSMUST00000044166 HellsQ60848 821 aa9.56□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Fam53cQ8BXQ8 393 aa9.56□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Dusp10Q9ESS0 483 aa9.56□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Kiaa0232Q80U59 1396 aaKnown RBP9.56□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Tmem87aQ8BXN9 555 aa9.55□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Nek11Q8C0Q4 628 aa9.55□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Spata32Q8C5V0 334 aa9.55□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Rreb1Q3UH06 1700 aaKnown RBP9.55□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Dhx8A2A4P0 1244 aaKnown RBP9.55□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Fbxl16A2RT62 479 aa9.55□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Idi1P58044 227 aa9.55□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Bcl2l13P59017 434 aa9.55□□□□□ -0.88
Cdc40-201ENSMUST00000044166 L1td1Q587J6 782 aaKnown RBP9.55□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Vil1Q62468 827 aa9.55□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Ifit1Q64282 463 aa9.55□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Smarcc2Q6PDG5 1213 aa9.55□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Tubb4aQ9D6F9 444 aa9.55□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Ipo7Q9EPL8 1038 aaKnown RBP9.55□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Col4a3bpQ9EQG9 624 aa9.55□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Col1a2Q01149 1372 aa9.55□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Scn7aB1AYL1 1681 aa9.55□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Ttll12Q3UDE2 639 aa9.55□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Irf9Q61179 399 aa9.55□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Mns1Q61884 491 aa9.55□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Rassf8Q8CJ96 419 aa9.55□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Golph3lQ8R088 285 aaKnown RBP9.55□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Znf704Q9ERQ3 566 aa9.55□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Aox2Q5SGK3 1345 aa9.54□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Abcc12Q80WJ6 1366 aa9.54□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Rgs12Q8CGE9 1381 aa9.54□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Kcnb1Q03717 857 aa9.54□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Atp1a3Q6PIC6 1013 aa9.54□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Frat2Q8K025 231 aa9.54□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Ktn1Q61595 1327 aaKnown RBP9.54□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Nup153E9Q3G8 1462 aaKnown RBP9.54□□□□□ -0.88
Cdc40-201ENSMUST00000044166 H2afxP27661 143 aaKnown RBP9.54□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Samsn1P57725 372 aa9.54□□□□□ -0.88
Cdc40-201ENSMUST00000044166 4930504O13RikQ8C5Z9 145 aa9.54□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Xpo4Q9ESJ0 1151 aa9.54□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Slit3Q9WVB4 1523 aa9.54□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Atp10bB1AWN4 1474 aa9.54□□□□□ -0.88
Cdc40-201ENSMUST00000044166 XpcP51612 930 aa9.53□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Kmt5bQ3U8K7 883 aa9.53□□□□□ -0.88
Cdc40-201ENSMUST00000044166 TrhQ62361 256 aa9.53□□□□□ -0.88
Cdc40-201ENSMUST00000044166 GckrQ91X44 587 aa9.53□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Calcoco2A2A6M5 331 aa9.53□□□□□ -0.88
Cdc40-201ENSMUST00000044166 PtprvP70289 1705 aa9.53□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Trak2Q6P9N8 913 aa9.53□□□□□ -0.88
Cdc40-201ENSMUST00000044166 RictorQ6QI06 1708 aa9.53□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Pnpla2Q8BJ56 486 aa9.53□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Vps53Q8CCB4 832 aa9.53□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Ccdc158Q8CDI6 1109 aa9.53□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Amotl2Q8K371 772 aa9.53□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Ddx27Q921N6 760 aaKnown RBP9.53□□□□□ -0.88
Cdc40-201ENSMUST00000044166 NagaQ9QWR8 415 aa9.53□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Abcc10Q8R4P9 1501 aa9.53□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Flt4P35917 1363 aa9.53□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Rbbp8nlA2ABX0 614 aa9.53□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Ccdc102aQ3TMW1 549 aa9.53□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Tmem119Q8R138 280 aa9.53□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Luzp1Q8R4U7 1068 aaKnown RBP9.53□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Sstr3P30935 428 aa9.52□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Neurod6P48986 337 aa9.52□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Ankrd24Q80VM7 985 aa9.52□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Dnm3Q8BZ98 863 aa9.52□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Srek1Q8BZX4 494 aaKnown RBP9.52□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Atad2Q8CDM1 1040 aa9.52□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Mical1Q8VDP3 1048 aa9.52□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Lrrfip2Q91WK0 415 aa9.52□□□□□ -0.88
Cdc40-201ENSMUST00000044166 Lmbr1lQ9D1E5 489 aa9.52□□□□□ -0.88
Cdc40-201ENSMUST00000044166 RargP18911 458 aaKnown RBP9.52□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Tpm4Q6IRU2 248 aa9.52□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 16.6 ms