RNA–Protein interactions for RNA: ENSMUST00000035911.4

Rc3h1-201, Transcript of Roquin-1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Rc3h1, Length 3,476 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1-201ENSMUST00000035911 Atf7Q8R0S1 413 aa6.54□□□□□ -1.36
Rc3h1-201ENSMUST00000035911 Ppp4r3bQ922R5 820 aa6.54□□□□□ -1.36
Rc3h1-201ENSMUST00000035911 KynuQ9CXF0 464 aa6.54□□□□□ -1.36
Rc3h1-201ENSMUST00000035911 Nfu1Q9QZ23 255 aa6.54□□□□□ -1.36
Rc3h1-201ENSMUST00000035911 Skint5A7XUY5 1461 aa6.54□□□□□ -1.36
Rc3h1-201ENSMUST00000035911 C2cd2E9Q3C1 696 aa6.53□□□□□ -1.36
Rc3h1-201ENSMUST00000035911 Cct4P80315 539 aaKnown RBP6.53□□□□□ -1.36
Rc3h1-201ENSMUST00000035911 Ggnbp2Q5SV77 696 aa6.53□□□□□ -1.36
Rc3h1-201ENSMUST00000035911 Ccne1Q61457 408 aa6.53□□□□□ -1.36
Rc3h1-201ENSMUST00000035911 Baiap3Q80TT2 1134 aa6.53□□□□□ -1.36
Rc3h1-201ENSMUST00000035911 Trim6Q8BGE7 488 aa6.53□□□□□ -1.36
Rc3h1-201ENSMUST00000035911 Hpcal4Q8BGZ1 191 aa6.53□□□□□ -1.36
Rc3h1-201ENSMUST00000035911 Rec8Q8C5S7 591 aa6.53□□□□□ -1.36
Rc3h1-201ENSMUST00000035911 Rassf8Q8CJ96 419 aa6.53□□□□□ -1.36
Rc3h1-201ENSMUST00000035911 Stk38Q91VJ4 465 aa6.53□□□□□ -1.36
Rc3h1-201ENSMUST00000035911 Ttc21bQ0HA38 1315 aa6.53□□□□□ -1.36
Rc3h1-201ENSMUST00000035911 Dnajc25A2ALW5 357 aa6.53□□□□□ -1.36
Rc3h1-201ENSMUST00000035911 Ppp1r15aP17564 657 aa6.53□□□□□ -1.36
Rc3h1-201ENSMUST00000035911 Pde1cQ64338 706 aa6.53□□□□□ -1.36
Rc3h1-201ENSMUST00000035911 Zfp317Q8C0Q5 607 aa6.53□□□□□ -1.36
Rc3h1-201ENSMUST00000035911 Fbxo18Q8K2I9 1042 aa6.53□□□□□ -1.36
Rc3h1-201ENSMUST00000035911 Casz1Q9CWL2 1761 aa6.53□□□□□ -1.36
Rc3h1-201ENSMUST00000035911 Nap1l2P51860 460 aa6.53□□□□□ -1.36
Rc3h1-201ENSMUST00000035911 Mnat1P51949 309 aa6.53□□□□□ -1.36
Rc3h1-201ENSMUST00000035911 Ppfia3P60469 1194 aa6.53□□□□□ -1.36
Rc3h1-201ENSMUST00000035911 Tubb4bP68372 445 aaKnown RBP6.53□□□□□ -1.36
Rc3h1-201ENSMUST00000035911 Limch1Q3UH68 1057 aa6.53□□□□□ -1.36
Rc3h1-201ENSMUST00000035911 TrhQ62361 256 aa6.53□□□□□ -1.36
Rc3h1-201ENSMUST00000035911 Sh3gl3Q62421 347 aa6.53□□□□□ -1.36
Rc3h1-201ENSMUST00000035911 Ifit1Q64282 463 aa6.53□□□□□ -1.36
Rc3h1-201ENSMUST00000035911 Srek1Q8BZX4 494 aaKnown RBP6.53□□□□□ -1.36
Rc3h1-201ENSMUST00000035911 Q8C1R3 189 aa6.53□□□□□ -1.36
Rc3h1-201ENSMUST00000035911 Zfp446Q8C9M8 523 aa6.53□□□□□ -1.36
Rc3h1-201ENSMUST00000035911 Cypt1Q8CH20 168 aa6.53□□□□□ -1.36
Rc3h1-201ENSMUST00000035911 Desi2Q9D291 194 aa6.53□□□□□ -1.36
Rc3h1-201ENSMUST00000035911 Ak2Q9WTP6 239 aa6.53□□□□□ -1.36
Rc3h1-201ENSMUST00000035911 Myo3aQ8K3H5 1613 aa6.53□□□□□ -1.36
Rc3h1-201ENSMUST00000035911 Msh6P54276 1358 aaKnown RBP6.53□□□□□ -1.36
Rc3h1-201ENSMUST00000035911 Eif3aP23116 1344 aaKnown RBP6.52□□□□□ -1.36
Rc3h1-201ENSMUST00000035911 PnnO35691 725 aaKnown RBP6.52□□□□□ -1.37
Rc3h1-201ENSMUST00000035911 Slc1a4O35874 532 aa6.52□□□□□ -1.37
Rc3h1-201ENSMUST00000035911 AppP12023 770 aa6.52□□□□□ -1.37
Rc3h1-201ENSMUST00000035911 Hmgb1P63158 215 aaKnown RBP6.52□□□□□ -1.37
Rc3h1-201ENSMUST00000035911 GclcP97494 637 aa6.52□□□□□ -1.37
Rc3h1-201ENSMUST00000035911 Exoc5Q3TPX4 708 aa6.52□□□□□ -1.37
Rc3h1-201ENSMUST00000035911 Ppp1r1bQ60829 194 aa6.52□□□□□ -1.37
Rc3h1-201ENSMUST00000035911 Ddx58Q6Q899 926 aa6.52□□□□□ -1.37
Rc3h1-201ENSMUST00000035911 Gpt2Q8BGT5 522 aa6.52□□□□□ -1.37
Rc3h1-201ENSMUST00000035911 Usp27Q8CEG8 438 aa6.52□□□□□ -1.37
Rc3h1-201ENSMUST00000035911 Mical1Q8VDP3 1048 aa6.52□□□□□ -1.37
Rc3h1-201ENSMUST00000035911 Card14Q99KF0 999 aa6.52□□□□□ -1.37
Rc3h1-201ENSMUST00000035911 Col4a3bpQ9EQG9 624 aa6.52□□□□□ -1.37
Rc3h1-201ENSMUST00000035911 Tpm3-rs7D3Z2H9 248 aa6.52□□□□□ -1.37
Rc3h1-201ENSMUST00000035911 Ap1g2O88512 791 aa6.52□□□□□ -1.37
Rc3h1-201ENSMUST00000035911 Tubb5P99024 444 aaKnown RBP6.52□□□□□ -1.37
Rc3h1-201ENSMUST00000035911 Gas2l3Q3UWW6 683 aa6.52□□□□□ -1.37
Rc3h1-201ENSMUST00000035911 EspnlQ3UYR4 1005 aa6.52□□□□□ -1.37
Rc3h1-201ENSMUST00000035911 EsrrbQ61539 433 aa6.52□□□□□ -1.37
Rc3h1-201ENSMUST00000035911 Snd1Q78PY7 910 aaKnown RBP6.52□□□□□ -1.37
Rc3h1-201ENSMUST00000035911 Iqcb1Q8BP00 598 aa6.52□□□□□ -1.37
Rc3h1-201ENSMUST00000035911 Klhl30Q8C3F7 581 aa6.52□□□□□ -1.37
Rc3h1-201ENSMUST00000035911 Vps37cQ8R105 352 aa6.52□□□□□ -1.37
Rc3h1-201ENSMUST00000035911 Aox2Q5SGK3 1345 aa6.52□□□□□ -1.37
Rc3h1-201ENSMUST00000035911 Cfap99A0A140LIX9 648 aa6.52□□□□□ -1.37
Rc3h1-201ENSMUST00000035911 Gm10471E9Q1C7 252 aa6.52□□□□□ -1.37
Rc3h1-201ENSMUST00000035911 Dnajc21E9Q8D0 531 aa6.52□□□□□ -1.37
Rc3h1-201ENSMUST00000035911 Map2k1P31938 393 aa6.52□□□□□ -1.37
Rc3h1-201ENSMUST00000035911 Scp2P32020 547 aaKnown RBP6.52□□□□□ -1.37
Rc3h1-201ENSMUST00000035911 Fam83gQ5SWY7 812 aa6.52□□□□□ -1.37
Rc3h1-201ENSMUST00000035911 Gngt1Q61012 74 aa6.52□□□□□ -1.37
Rc3h1-201ENSMUST00000035911 Gnl3lQ6PGG6 577 aaKnown RBP6.52□□□□□ -1.37
Rc3h1-201ENSMUST00000035911 Fmnl3Q6ZPF4 1028 aa6.52□□□□□ -1.37
Rc3h1-201ENSMUST00000035911 Phldb2Q8K1N2 1249 aa6.52□□□□□ -1.37
Rc3h1-201ENSMUST00000035911 CactinQ9CS00 772 aaKnown RBP6.52□□□□□ -1.37
Rc3h1-201ENSMUST00000035911 Adgrl1Q80TR1 1466 aa6.51□□□□□ -1.37
Rc3h1-201ENSMUST00000035911 Psmb7P70195 277 aa6.51□□□□□ -1.37
Rc3h1-201ENSMUST00000035911 Cdr2P97817 455 aa6.51□□□□□ -1.37
Rc3h1-201ENSMUST00000035911 Ric8aQ3TIR3 530 aa6.51□□□□□ -1.37
Rc3h1-201ENSMUST00000035911 Tmem109Q3UBX0 243 aa6.51□□□□□ -1.37
Rc3h1-201ENSMUST00000035911 Serpinb6Q60854 378 aa6.51□□□□□ -1.37
Rc3h1-201ENSMUST00000035911 PrimpolQ6P1E7 537 aa6.51□□□□□ -1.37
Rc3h1-201ENSMUST00000035911 Ccdc181Q80ZU5 509 aa6.51□□□□□ -1.37
Rc3h1-201ENSMUST00000035911 Cdc23Q8BGZ4 597 aa6.51□□□□□ -1.37
Rc3h1-201ENSMUST00000035911 Rps6kb1Q8BSK8 525 aa6.51□□□□□ -1.37
Rc3h1-201ENSMUST00000035911 Wdr60Q8C761 999 aa6.51□□□□□ -1.37
Rc3h1-201ENSMUST00000035911 Nop2Q922K7 793 aaKnown RBP6.51□□□□□ -1.37
Rc3h1-201ENSMUST00000035911 Armc9Q9D2I5 817 aa6.51□□□□□ -1.37
Rc3h1-201ENSMUST00000035911 RabggtaQ9JHK4 567 aa6.51□□□□□ -1.37
Rc3h1-201ENSMUST00000035911 Fndc1E9Q043 1732 aa6.51□□□□□ -1.37
Rc3h1-201ENSMUST00000035911 Hecw2Q6I6G8 1578 aa6.51□□□□□ -1.37
Rc3h1-201ENSMUST00000035911 Cdc42bpgQ80UW5 1551 aa6.51□□□□□ -1.37
Rc3h1-201ENSMUST00000035911 Proca1B0QZF7 307 aa6.51□□□□□ -1.37
Rc3h1-201ENSMUST00000035911 TrdnE9Q9K5 693 aa6.51□□□□□ -1.37
Rc3h1-201ENSMUST00000035911 Vsnl1P62761 191 aa6.51□□□□□ -1.37
Rc3h1-201ENSMUST00000035911 Lrrc1Q80VQ1 524 aa6.51□□□□□ -1.37
Rc3h1-201ENSMUST00000035911 Pip4k2bQ80XI4 416 aa6.51□□□□□ -1.37
Rc3h1-201ENSMUST00000035911 Ccdc158Q8CDI6 1109 aa6.51□□□□□ -1.37
Rc3h1-201ENSMUST00000035911 Acsbg1Q99PU5 721 aa6.51□□□□□ -1.37
Rc3h1-201ENSMUST00000035911 Mrpl44Q9CY73 333 aaKnown RBP6.51□□□□□ -1.37
Rc3h1-201ENSMUST00000035911 Paip2Q9D6V8 124 aa6.51□□□□□ -1.37
Retrieved 100 of 22,080 RNA–protein pairs in 21.4 ms