RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Tmem2Q5FWI3 1383 aa15.65■□□□□ 0.1
Nup88-201ENSMUST00000035283 Hand2Q61039 217 aa15.65■□□□□ 0.1
Nup88-201ENSMUST00000035283 Chmp7Q8R1T1 451 aa15.65■□□□□ 0.1
Nup88-201ENSMUST00000035283 SdsQ8VBT2 327 aa15.65■□□□□ 0.1
Nup88-201ENSMUST00000035283 Adamtsl3G3UXC7 1706 aa15.64■□□□□ 0.09
Nup88-201ENSMUST00000035283 Casz1Q9CWL2 1761 aa15.64■□□□□ 0.09
Nup88-201ENSMUST00000035283 LyarQ08288 388 aaKnown RBP15.64■□□□□ 0.09
Nup88-201ENSMUST00000035283 ThemisQ8BGW0 636 aa15.64■□□□□ 0.09
Nup88-201ENSMUST00000035283 TefQ9JLC6 301 aa15.64■□□□□ 0.09
Nup88-201ENSMUST00000035283 Tcof1O08784 1320 aaKnown RBP15.64■□□□□ 0.09
Nup88-201ENSMUST00000035283 Vmn2r23E9PXI5 849 aa15.63■□□□□ 0.09
Nup88-201ENSMUST00000035283 Sult6b1P0CC03 303 aa15.63■□□□□ 0.09
Nup88-201ENSMUST00000035283 Kcnj4P52189 445 aa15.63■□□□□ 0.09
Nup88-201ENSMUST00000035283 ZyxQ62523 564 aa15.63■□□□□ 0.09
Nup88-201ENSMUST00000035283 Spty2d1Q68FG3 682 aa15.63■□□□□ 0.09
Nup88-201ENSMUST00000035283 Tmem87aQ8BXN9 555 aa15.63■□□□□ 0.09
Nup88-201ENSMUST00000035283 Naa16Q9DBB4 864 aa15.63■□□□□ 0.09
Nup88-201ENSMUST00000035283 Usp42B2RQC2 1324 aaKnown RBP15.63■□□□□ 0.09
Nup88-201ENSMUST00000035283 Serpinb6bO08804 377 aa15.63■□□□□ 0.09
Nup88-201ENSMUST00000035283 Paxbp1P58501 919 aa15.63■□□□□ 0.09
Nup88-201ENSMUST00000035283 Gnat3Q3V3I2 354 aa15.63■□□□□ 0.09
Nup88-201ENSMUST00000035283 Fkbp5Q64378 456 aa15.63■□□□□ 0.09
Nup88-201ENSMUST00000035283 Atg9aQ68FE2 551 aa15.63■□□□□ 0.09
Nup88-201ENSMUST00000035283 Znf532Q6NXK2 1036 aa15.63■□□□□ 0.09
Nup88-201ENSMUST00000035283 U2af1l4Q8BGJ9 220 aa15.63■□□□□ 0.09
Nup88-201ENSMUST00000035283 Tmem67Q8BR76 992 aa15.63■□□□□ 0.09
Nup88-201ENSMUST00000035283 Shisa4Q8CA71 197 aa15.63■□□□□ 0.09
Nup88-201ENSMUST00000035283 Atad2Q8CDM1 1040 aa15.63■□□□□ 0.09
Nup88-201ENSMUST00000035283 Stk38Q91VJ4 465 aa15.63■□□□□ 0.09
Nup88-201ENSMUST00000035283 Kcnq3Q8K3F6 873 aa15.62■□□□□ 0.09
Nup88-201ENSMUST00000035283 Phkg2Q9DB30 406 aa15.62■□□□□ 0.09
Nup88-201ENSMUST00000035283 Magi2Q9WVQ1 1275 aa15.62■□□□□ 0.09
Nup88-201ENSMUST00000035283 Sipa1l2Q80TE4 1722 aa15.62■□□□□ 0.09
Nup88-201ENSMUST00000035283 Rgs12Q8CGE9 1381 aa15.62■□□□□ 0.09
Nup88-201ENSMUST00000035283 Cfap99A0A140LIX9 648 aa15.62■□□□□ 0.09
Nup88-201ENSMUST00000035283 Wdr17E9Q271 1322 aa15.61■□□□□ 0.09
Nup88-201ENSMUST00000035283 Gm29094F6Q785 221 aa15.61■□□□□ 0.09
Nup88-201ENSMUST00000035283 Kcnd1Q03719 651 aa15.61■□□□□ 0.09
Nup88-201ENSMUST00000035283 NfkbibQ60778 359 aa15.61■□□□□ 0.09
Nup88-201ENSMUST00000035283 MthfsQ9D110 203 aa15.61■□□□□ 0.09
Nup88-201ENSMUST00000035283 Fam50bQ9WTJ8 334 aa15.61■□□□□ 0.09
Nup88-201ENSMUST00000035283 Nlrp1aQ2LKU9 1182 aa15.61■□□□□ 0.09
Nup88-201ENSMUST00000035283 Sec62Q8BU14 398 aaKnown RBP15.61■□□□□ 0.09
Nup88-201ENSMUST00000035283 Fam53cQ8BXQ8 393 aa15.61■□□□□ 0.09
Nup88-201ENSMUST00000035283 AidaQ8C4Q6 305 aa15.61■□□□□ 0.09
Nup88-201ENSMUST00000035283 Zfp202Q8C879 641 aa15.61■□□□□ 0.09
Nup88-201ENSMUST00000035283 Nop2Q922K7 793 aaKnown RBP15.61■□□□□ 0.09
Nup88-201ENSMUST00000035283 Large1Q9Z1M7 756 aa15.61■□□□□ 0.09
Nup88-201ENSMUST00000035283 Sptlc2P97363 560 aaKnown RBP15.6■□□□□ 0.09
Nup88-201ENSMUST00000035283 Tmem59lQ7TNI2 337 aa15.6■□□□□ 0.09
Nup88-201ENSMUST00000035283 Ncaph2Q8BSP2 607 aa15.6■□□□□ 0.09
Nup88-201ENSMUST00000035283 Spata32Q8C5V0 334 aa15.6■□□□□ 0.09
Nup88-201ENSMUST00000035283 Tmc2Q8R4P4 888 aa15.6■□□□□ 0.09
Nup88-201ENSMUST00000035283 Chmp3Q9CQ10 224 aa15.6■□□□□ 0.09
Nup88-201ENSMUST00000035283 Simc1E9Q6E9 1354 aa15.6■□□□□ 0.09
Nup88-201ENSMUST00000035283 Grin2dQ03391 1323 aa15.6■□□□□ 0.09
Nup88-201ENSMUST00000035283 Shank2Q80Z38 1476 aa15.6■□□□□ 0.09
Nup88-201ENSMUST00000035283 Prl3d3A0A0M6L0J6 224 aa15.6■□□□□ 0.09
Nup88-201ENSMUST00000035283 Dnajc25A2ALW5 357 aa15.6■□□□□ 0.09
Nup88-201ENSMUST00000035283 Dzip1Q8BMD2 852 aa15.6■□□□□ 0.09
Nup88-201ENSMUST00000035283 Telo2Q9DC40 840 aaKnown RBP15.6■□□□□ 0.09
Nup88-201ENSMUST00000035283 Stxbp4Q9WV89 557 aa15.6■□□□□ 0.09
Nup88-201ENSMUST00000035283 Pde3aQ9Z0X4 1141 aa15.6■□□□□ 0.09
Nup88-201ENSMUST00000035283 Slc1a4O35874 532 aa15.59■□□□□ 0.09
Nup88-201ENSMUST00000035283 H2afxP27661 143 aaKnown RBP15.59■□□□□ 0.09
Nup88-201ENSMUST00000035283 Ppp4r3aQ6P2K6 820 aa15.59■□□□□ 0.09
Nup88-201ENSMUST00000035283 TnrQ8BYI9 1358 aa15.59■□□□□ 0.09
Nup88-201ENSMUST00000035283 Sos2Q02384 1333 aa15.59■□□□□ 0.09
Nup88-201ENSMUST00000035283 LtkP08923 888 aa15.59■□□□□ 0.09
Nup88-201ENSMUST00000035283 CebpaP53566 359 aa15.59■□□□□ 0.09
Nup88-201ENSMUST00000035283 Pfkfb1P70266 471 aa15.59■□□□□ 0.09
Nup88-201ENSMUST00000035283 Kmt5bQ3U8K7 883 aa15.59■□□□□ 0.09
Nup88-201ENSMUST00000035283 Cdc37Q61081 379 aa15.59■□□□□ 0.09
Nup88-201ENSMUST00000035283 Ric1Q69ZJ7 1422 aa15.59■□□□□ 0.09
Nup88-201ENSMUST00000035283 OptnQ8K3K8 584 aa15.59■□□□□ 0.09
Nup88-201ENSMUST00000035283 Acsbg1Q99PU5 721 aa15.59■□□□□ 0.09
Nup88-201ENSMUST00000035283 Gli3Q61602 1583 aa15.58■□□□□ 0.09
Nup88-201ENSMUST00000035283 Lcmt1A0A0U1RNF2 332 aa15.58■□□□□ 0.09
Nup88-201ENSMUST00000035283 Pnpla2Q8BJ56 486 aa15.58■□□□□ 0.09
Nup88-201ENSMUST00000035283 Gtpbp4Q99ME9 634 aaKnown RBP15.58■□□□□ 0.09
Nup88-201ENSMUST00000035283 Gm43638A0A0J9YU36 694 aa15.58■□□□□ 0.08
Nup88-201ENSMUST00000035283 Spag5Q7TME2 1165 aa15.58■□□□□ 0.08
Nup88-201ENSMUST00000035283 Asic4Q7TNS7 539 aa15.58■□□□□ 0.08
Nup88-201ENSMUST00000035283 Vps18Q8R307 973 aa15.58■□□□□ 0.08
Nup88-201ENSMUST00000035283 Tjp1P39447 1745 aaKnown RBP15.58■□□□□ 0.08
Nup88-201ENSMUST00000035283 Jakmip2D3YXK0 820 aa15.57■□□□□ 0.08
Nup88-201ENSMUST00000035283 Slc4a1P04919 929 aa15.57■□□□□ 0.08
Nup88-201ENSMUST00000035283 Zranb3Q6NZP1 1069 aa15.57■□□□□ 0.08
Nup88-201ENSMUST00000035283 Ddx58Q6Q899 926 aa15.57■□□□□ 0.08
Nup88-201ENSMUST00000035283 Krt25Q8VCW2 446 aa15.57■□□□□ 0.08
Nup88-201ENSMUST00000035283 Arl8aQ8VEH3 186 aa15.57■□□□□ 0.08
Nup88-201ENSMUST00000035283 Abcb6Q9DC29 842 aa15.57■□□□□ 0.08
Nup88-201ENSMUST00000035283 Syde2E9PUP1 1314 aa15.57■□□□□ 0.08
Nup88-201ENSMUST00000035283 AW822073A0A0N4SUK1 652 aa15.57■□□□□ 0.08
Nup88-201ENSMUST00000035283 Gtpbp6Q3U6U5 514 aa15.57■□□□□ 0.08
Nup88-201ENSMUST00000035283 Usp13Q5BKP2 858 aa15.57■□□□□ 0.08
Nup88-201ENSMUST00000035283 TkfcQ8VC30 578 aa15.57■□□□□ 0.08
Nup88-201ENSMUST00000035283 IncenpQ9WU62 880 aa15.57■□□□□ 0.08
Nup88-201ENSMUST00000035283 Actn3O88990 900 aaKnown RBP15.56■□□□□ 0.08
Nup88-201ENSMUST00000035283 Gas2l3Q3UWW6 683 aa15.56■□□□□ 0.08
Retrieved 100 of 22,080 RNA–protein pairs in 44.2 ms