RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Cops6O88545 324 aa11.39□□□□□ -0.59
Ldlr-201ENSMUST00000034713 SfswapQ3USH5 945 aaKnown RBP11.39□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Golim4Q8BXA1 655 aa11.39□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Pde3aQ9Z0X4 1141 aa11.39□□□□□ -0.59
Ldlr-201ENSMUST00000034713 NmiO35309 314 aa11.39□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Dnajc2P54103 621 aaKnown RBP11.39□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Chl1P70232 1209 aa11.39□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Eno4Q8C042 619 aa11.39□□□□□ -0.59
Ldlr-201ENSMUST00000034713 1700006A11RikB9EHI3 544 aa11.39□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Simc1E9Q6E9 1354 aa11.39□□□□□ -0.59
Ldlr-201ENSMUST00000034713 NapbP28663 298 aa11.39□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Ppp6r3Q922D4 844 aa11.39□□□□□ -0.59
Ldlr-201ENSMUST00000034713 TrdnE9Q9K5 693 aa11.39□□□□□ -0.59
Ldlr-201ENSMUST00000034713 HellsQ60848 821 aa11.39□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Gm21985Q6P6P5 1106 aa11.39□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Smim5Q8BT42 78 aa11.39□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Sde2Q8K1J5 448 aaKnown RBP11.39□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Rufy3Q9D394 469 aa11.39□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Sycp2lA0A0M3U1B0 842 aa11.38□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Sdc2P43407 202 aa11.38□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Gbp4Q61107 620 aa11.38□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Naa15Q80UM3 865 aaKnown RBP11.38□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Znf287Q9EQB9 759 aa11.38□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Gdpd2Q9ESM6 539 aa11.38□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Ybx3Q9JKB3 361 aaKnown RBP11.38□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Pa2g4P50580 394 aaKnown RBP11.38□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Cct2P80314 535 aaKnown RBP11.38□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Cep120Q7TSG1 988 aa11.38□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Ano1Q8BHY3 960 aa11.38□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Commd10Q8JZY2 202 aa11.38□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Ccdc12Q8R344 166 aaKnown RBP11.38□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Ino80Q6ZPV2 1559 aa11.38□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Dcaf5Q80T85 946 aa11.38□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Tti2Q8BGV4 512 aa11.38□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Ccar2Q8VDP4 922 aaKnown RBP11.38□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Foxo3Q9WVH4 672 aa11.38□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Dapk3O54784 448 aa11.37□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Snrpa1P57784 255 aaKnown RBP11.37□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Ncapg2Q6DFV1 1138 aa11.37□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Api5O35841 504 aaKnown RBP11.37□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Kcnj4P52189 445 aa11.37□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Txndc16Q7TN22 820 aa11.37□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Zfp397Q7TNK4 527 aa11.37□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Rassf4Q8CB96 322 aa11.37□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Cyp2ab1S4R196 498 aa11.37□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Prl3d3A0A0M6L0J6 224 aa11.37□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Bin1O08539 588 aaKnown RBP11.37□□□□□ -0.59
Ldlr-201ENSMUST00000034713 ArsiQ32KI9 573 aa11.37□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Zbtb3Q91X45 518 aa11.37□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Nap1l5Q9JJF0 156 aa11.37□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Rbbp8nlA2ABX0 614 aa11.37□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Mmp8O70138 465 aa11.37□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Tm6sf1P58749 370 aa11.37□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Ctr9Q62018 1173 aaKnown RBP11.37□□□□□ -0.59
Ldlr-201ENSMUST00000034713 IqcgQ80W32 419 aa11.37□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Rdm1Q9CQK3 281 aa11.37□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Sh3tc1G3X9F6 1346 aa11.36□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Ppfia3P60469 1194 aa11.36□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Bbof1Q3V079 533 aa11.36□□□□□ -0.59
Ldlr-201ENSMUST00000034713 CoilQ5SU73 570 aa11.36□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Ctage5Q8R311 779 aa11.36□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Uchl5Q9WUP7 329 aa11.36□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Prl3d2F6R3P9 224 aa11.36□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Clec11aO88200 328 aa11.36□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Abca8aQ8K442 1620 aa11.36□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Aox1O54754 1333 aa11.36□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Hdgfl1Q2VPR5 283 aa11.36□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Secisbp2lQ6A098 1086 aaKnown RBP11.36□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Nek11Q8C0Q4 628 aa11.36□□□□□ -0.59
Ldlr-201ENSMUST00000034713 BrapQ99MP8 591 aa11.36□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Cfap53Q9D439 514 aa11.36□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Dydc1Q9D9T0 175 aa11.36□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Sil1Q9EPK6 465 aa11.36□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Col1a2Q01149 1372 aa11.35□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Glg1Q61543 1175 aaKnown RBP11.35□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Ifit2Q64112 472 aa11.35□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Znf18Q810A1 556 aa11.35□□□□□ -0.59
Ldlr-201ENSMUST00000034713 NsmfQ99NF2 532 aa11.35□□□□□ -0.59
Ldlr-201ENSMUST00000034713 IncenpQ9WU62 880 aa11.35□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Akap2O54931 893 aa11.35□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Hspa1lP16627 641 aa11.35□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Tsg101Q61187 391 aa11.35□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Znf653Q6YND2 615 aa11.35□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Tubb2aQ7TMM9 445 aa11.35□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Tubb2bQ9CWF2 445 aa11.35□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Ndufa8Q9DCJ5 172 aa11.35□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Metap2O08663 478 aaKnown RBP11.35□□□□□ -0.59
Ldlr-201ENSMUST00000034713 U2af1l4Q8BGJ9 220 aa11.35□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Ssfa2Q922B9 1252 aa11.35□□□□□ -0.59
Ldlr-201ENSMUST00000034713 RarsQ9D0I9 660 aaKnown RBP11.35□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Bcl9Q9D219 1425 aa11.35□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Disp3A3KFU9 1347 aa11.35□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Syde2E9PUP1 1314 aa11.35□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Zscan29E9Q5B4 869 aa11.34□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Tnni2P13412 182 aa11.34□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Traf3ip1Q149C2 625 aa11.34□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Jarid2Q62315 1234 aa11.34□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Mipol1Q9D9F8 279 aa11.34□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Knop1Q9Z2Q2 478 aaKnown RBP11.34□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Ehbp1l1Q99MS7 1716 aa11.34□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 23.1 ms