RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 Asic3Q6X1Y6 530 aa26.14■■□□□ 1.77
Sh3rf1-201ENSMUST00000034060 Ranbp6Q8BIV3 1105 aa26.14■■□□□ 1.77
Sh3rf1-201ENSMUST00000034060 Bmp2kQ91Z96 1138 aa26.14■■□□□ 1.77
Sh3rf1-201ENSMUST00000034060 Caprin2Q05A80 1031 aaKnown RBP26.13■■□□□ 1.77
Sh3rf1-201ENSMUST00000034060 Pym1Q8CHP5 203 aaKnown RBP26.13■■□□□ 1.77
Sh3rf1-201ENSMUST00000034060 Zfpm1O35615 995 aa26.13■■□□□ 1.77
Sh3rf1-201ENSMUST00000034060 Gnat2P50149 354 aa26.13■■□□□ 1.77
Sh3rf1-201ENSMUST00000034060 Arhgef12Q8R4H2 1543 aaKnown RBP26.13■■□□□ 1.77
Sh3rf1-201ENSMUST00000034060 Stx8O88983 236 aa26.13■■□□□ 1.77
Sh3rf1-201ENSMUST00000034060 Krt77Q6IFZ6 572 aa26.13■■□□□ 1.77
Sh3rf1-201ENSMUST00000034060 Tcp11l1Q8BTG3 509 aa26.12■■□□□ 1.77
Sh3rf1-201ENSMUST00000034060 Atp2a2O55143 1044 aaKnown RBP26.12■■□□□ 1.77
Sh3rf1-201ENSMUST00000034060 Agbl1Q09M05 972 aa26.12■■□□□ 1.77
Sh3rf1-201ENSMUST00000034060 Ccdc57Q6PHN1 1016 aa26.12■■□□□ 1.77
Sh3rf1-201ENSMUST00000034060 Ndufab1Q9CR21 156 aa26.12■■□□□ 1.77
Sh3rf1-201ENSMUST00000034060 SarnpQ9D1J3 210 aaKnown RBP26.12■■□□□ 1.77
Sh3rf1-201ENSMUST00000034060 Aplp1Q03157 653 aa26.12■■□□□ 1.77
Sh3rf1-201ENSMUST00000034060 VimP20152 466 aaKnown RBP26.11■■□□□ 1.77
Sh3rf1-201ENSMUST00000034060 SlmapQ3URD3 845 aa26.11■■□□□ 1.77
Sh3rf1-201ENSMUST00000034060 Rimbp2Q80U40 1072 aa26.11■■□□□ 1.77
Sh3rf1-201ENSMUST00000034060 Usp11Q99K46 921 aa26.11■■□□□ 1.77
Sh3rf1-201ENSMUST00000034060 Terf2ipQ91VL8 393 aa26.11■■□□□ 1.77
Sh3rf1-201ENSMUST00000034060 ParvgQ9ERD8 331 aa26.11■■□□□ 1.77
Sh3rf1-201ENSMUST00000034060 AU019823E9PUQ3 292 aa26.11■■□□□ 1.77
Sh3rf1-201ENSMUST00000034060 Dnajc21E9Q8D0 531 aa26.1■■□□□ 1.77
Sh3rf1-201ENSMUST00000034060 Neurog2P70447 263 aa26.1■■□□□ 1.77
Sh3rf1-201ENSMUST00000034060 Ddx49Q4FZF3 480 aaKnown RBP26.1■■□□□ 1.77
Sh3rf1-201ENSMUST00000034060 Eif4g1Q6NZJ6 1600 aaKnown RBP26.1■■□□□ 1.77
Sh3rf1-201ENSMUST00000034060 P4ha1Q60715 534 aa26.1■■□□□ 1.77
Sh3rf1-201ENSMUST00000034060 Ccdc82Q6PG04 518 aa26.1■■□□□ 1.77
Sh3rf1-201ENSMUST00000034060 Grm8P47743 908 aa26.1■■□□□ 1.77
Sh3rf1-201ENSMUST00000034060 Rtn1Q8K0T0 780 aa26.1■■□□□ 1.77
Sh3rf1-201ENSMUST00000034060 Tceanc2Q8R2M0 207 aa26.1■■□□□ 1.77
Sh3rf1-201ENSMUST00000034060 Ift20Q61025 132 aa26.09■■□□□ 1.77
Sh3rf1-201ENSMUST00000034060 Ccdc155Q80VJ8 648 aa26.09■■□□□ 1.77
Sh3rf1-201ENSMUST00000034060 Ttc5Q99LG4 440 aa26.09■■□□□ 1.77
Sh3rf1-201ENSMUST00000034060 JmyQ9QXM1 983 aa26.09■■□□□ 1.77
Sh3rf1-201ENSMUST00000034060 Taf7Q9R1C0 341 aa26.09■■□□□ 1.77
Sh3rf1-201ENSMUST00000034060 Gm28047Q3US59 414 aa26.09■■□□□ 1.77
Sh3rf1-201ENSMUST00000034060 Ccdc14Q8K2J4 934 aa26.09■■□□□ 1.77
Sh3rf1-201ENSMUST00000034060 Dennd3A2RT67 1274 aa26.09■■□□□ 1.77
Sh3rf1-201ENSMUST00000034060 Stmn2P55821 179 aa26.09■■□□□ 1.77
Sh3rf1-201ENSMUST00000034060 Tcerg1lQ3B807 590 aa26.09■■□□□ 1.77
Sh3rf1-201ENSMUST00000034060 Kiaa1328Q6NZK5 612 aa26.08■■□□□ 1.77
Sh3rf1-201ENSMUST00000034060 Larp6Q8BN59 492 aa26.08■■□□□ 1.77
Sh3rf1-201ENSMUST00000034060 Elf2Q9JHC9 593 aa26.08■■□□□ 1.77
Sh3rf1-201ENSMUST00000034060 Sbno1Q689Z5 1390 aa26.08■■□□□ 1.77
Sh3rf1-201ENSMUST00000034060 Matr3Q8K310 846 aaKnown RBP26.08■■□□□ 1.77
Sh3rf1-201ENSMUST00000034060 Btn2a2A4QPC6 514 aa26.08■■□□□ 1.77
Sh3rf1-201ENSMUST00000034060 Tbc1d31Q6NXY1 996 aa26.08■■□□□ 1.77
Sh3rf1-201ENSMUST00000034060 Kdm1aQ6ZQ88 853 aa26.08■■□□□ 1.77
Sh3rf1-201ENSMUST00000034060 Nop2Q922K7 793 aaKnown RBP26.08■■□□□ 1.77
Sh3rf1-201ENSMUST00000034060 Bicdl1A0JNT9 577 aa26.08■■□□□ 1.77
Sh3rf1-201ENSMUST00000034060 Tmx1Q8VBT0 278 aa26.08■■□□□ 1.76
Sh3rf1-201ENSMUST00000034060 1700006A11RikB9EHI3 544 aa26.07■■□□□ 1.76
Sh3rf1-201ENSMUST00000034060 Eef1dP57776 281 aaKnown RBP26.07■■□□□ 1.76
Sh3rf1-201ENSMUST00000034060 Cyp27a1Q9DBG1 533 aa26.07■■□□□ 1.76
Sh3rf1-201ENSMUST00000034060 Atp7aQ64430 1491 aa26.07■■□□□ 1.76
Sh3rf1-201ENSMUST00000034060 Osbpl5Q9ER64 874 aa26.07■■□□□ 1.76
Sh3rf1-201ENSMUST00000034060 Mcm10Q0VBD2 885 aa26.07■■□□□ 1.76
Sh3rf1-201ENSMUST00000034060 SkiQ60698 725 aa26.07■■□□□ 1.76
Sh3rf1-201ENSMUST00000034060 Hook2Q7TMK6 716 aa26.07■■□□□ 1.76
Sh3rf1-201ENSMUST00000034060 Arhgap24Q8C4V1 747 aa26.07■■□□□ 1.76
Sh3rf1-201ENSMUST00000034060 Crocc2F6XLV1 1638 aa26.07■■□□□ 1.76
Sh3rf1-201ENSMUST00000034060 Mybpc2Q5XKE0 1136 aa26.06■■□□□ 1.76
Sh3rf1-201ENSMUST00000034060 Calml3Q9D6P8 149 aa26.06■■□□□ 1.76
Sh3rf1-201ENSMUST00000034060 Shroom2A2ALU4 1481 aa26.06■■□□□ 1.76
Sh3rf1-201ENSMUST00000034060 Slc4a4O88343 1079 aa26.06■■□□□ 1.76
Sh3rf1-201ENSMUST00000034060 Usp5P56399 858 aaKnown RBP26.06■■□□□ 1.76
Sh3rf1-201ENSMUST00000034060 Plcd3Q8K2J0 785 aa26.06■■□□□ 1.76
Sh3rf1-201ENSMUST00000034060 Mrc2Q64449 1479 aa26.06■■□□□ 1.76
Sh3rf1-201ENSMUST00000034060 Vamp4O70480 141 aa26.06■■□□□ 1.76
Sh3rf1-201ENSMUST00000034060 VeztQ3ZK22 780 aa26.06■■□□□ 1.76
Sh3rf1-201ENSMUST00000034060 Ppfia3P60469 1194 aa26.06■■□□□ 1.76
Sh3rf1-201ENSMUST00000034060 Apol10bG3X9K7 334 aa26.05■■□□□ 1.76
Sh3rf1-201ENSMUST00000034060 Ccdc25Q78PG9 208 aa26.05■■□□□ 1.76
Sh3rf1-201ENSMUST00000034060 Rps6kb1Q8BSK8 525 aa26.05■■□□□ 1.76
Sh3rf1-201ENSMUST00000034060 Zbtb3Q91X45 518 aa26.05■■□□□ 1.76
Sh3rf1-201ENSMUST00000034060 Atad3Q925I1 591 aa26.05■■□□□ 1.76
Sh3rf1-201ENSMUST00000034060 NsmfQ99NF2 532 aa26.05■■□□□ 1.76
Sh3rf1-201ENSMUST00000034060 Diaph2O70566 1098 aa26.05■■□□□ 1.76
Sh3rf1-201ENSMUST00000034060 Ncaph2Q8BSP2 607 aa26.05■■□□□ 1.76
Sh3rf1-201ENSMUST00000034060 Hirip3Q8BLH7 601 aa26.05■■□□□ 1.76
Sh3rf1-201ENSMUST00000034060 Atp2b1G5E829 1220 aa26.05■■□□□ 1.76
Sh3rf1-201ENSMUST00000034060 Kiaa1211Q5PR69 1207 aa26.05■■□□□ 1.76
Sh3rf1-201ENSMUST00000034060 Ccdc89Q9DA73 370 aa26.05■■□□□ 1.76
Sh3rf1-201ENSMUST00000034060 Prr29B1ARI9 187 aa26.04■■□□□ 1.76
Sh3rf1-201ENSMUST00000034060 Cyp7a1Q64505 503 aa26.04■■□□□ 1.76
Sh3rf1-201ENSMUST00000034060 Ribc1Q9D0B8 379 aa26.04■■□□□ 1.76
Sh3rf1-201ENSMUST00000034060 Filip1Q9CS72 1211 aa26.04■■□□□ 1.76
Sh3rf1-201ENSMUST00000034060 Ankrd35E9Q9D8 996 aa26.04■■□□□ 1.76
Sh3rf1-201ENSMUST00000034060 Eps15P42567 897 aa26.04■■□□□ 1.76
Sh3rf1-201ENSMUST00000034060 Nap1l4Q78ZA7 375 aaKnown RBP26.04■■□□□ 1.76
Sh3rf1-201ENSMUST00000034060 Mtus1Q5HZI1 1210 aa26.04■■□□□ 1.76
Sh3rf1-201ENSMUST00000034060 Fam83gQ5SWY7 812 aa26.04■■□□□ 1.76
Sh3rf1-201ENSMUST00000034060 Syap1Q9D5V6 365 aa26.04■■□□□ 1.76
Sh3rf1-201ENSMUST00000034060 Pola1P33609 1465 aa26.04■■□□□ 1.76
Sh3rf1-201ENSMUST00000034060 Tex19.1Q99MV2 351 aa26.04■■□□□ 1.76
Sh3rf1-201ENSMUST00000034060 Hdac9Q99N13 588 aa26.04■■□□□ 1.76
Sh3rf1-201ENSMUST00000034060 Gm5934D3Z4U6 212 aa26.03■■□□□ 1.76
Retrieved 100 of 22,080 RNA–protein pairs in 21.3 ms