RNA–Protein interactions for RNA: ENSMUST00000028580.11

Ccdc34-201, Transcript of Coiled-coil domain-containing protein 34, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc34, Length 2,070 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc34-201ENSMUST00000028580 Arap2Q8BZ05 1703 aa23.18■■□□□ 1.3
Ccdc34-201ENSMUST00000028580 Tnrc6cQ3UHC0 1690 aaKnown RBP23.18■■□□□ 1.3
Ccdc34-201ENSMUST00000028580 Sall1Q9ER74 1322 aa23.17■■□□□ 1.3
Ccdc34-201ENSMUST00000028580 Gm45140A0A0N4SUM8 220 aa23.17■■□□□ 1.3
Ccdc34-201ENSMUST00000028580 Clec11aO88200 328 aa23.17■■□□□ 1.3
Ccdc34-201ENSMUST00000028580 Pald1P70261 859 aa23.17■■□□□ 1.3
Ccdc34-201ENSMUST00000028580 Fsd1Q7TPM6 496 aa23.17■■□□□ 1.3
Ccdc34-201ENSMUST00000028580 Tmem67Q8BR76 992 aa23.17■■□□□ 1.3
Ccdc34-201ENSMUST00000028580 Ncoa5Q91W39 579 aaKnown RBP23.17■■□□□ 1.3
Ccdc34-201ENSMUST00000028580 Sik3Q6P4S6 1311 aa23.17■■□□□ 1.3
Ccdc34-201ENSMUST00000028580 Ptgs1P22437 602 aa23.17■■□□□ 1.3
Ccdc34-201ENSMUST00000028580 Cct2P80314 535 aaKnown RBP23.17■■□□□ 1.3
Ccdc34-201ENSMUST00000028580 Ltv1Q6NSQ7 470 aaKnown RBP23.17■■□□□ 1.3
Ccdc34-201ENSMUST00000028580 Zeb2Q9R0G7 1215 aa23.17■■□□□ 1.3
Ccdc34-201ENSMUST00000028580 Ftl2P49945 183 aa23.16■■□□□ 1.3
Ccdc34-201ENSMUST00000028580 Gigyf1Q99MR1 1044 aaKnown RBP23.16■■□□□ 1.3
Ccdc34-201ENSMUST00000028580 Pes1Q9EQ61 584 aaKnown RBP23.16■■□□□ 1.3
Ccdc34-201ENSMUST00000028580 Tbc1d8Q9Z1A9 1134 aa23.16■■□□□ 1.3
Ccdc34-201ENSMUST00000028580 Kansl3A2RSY1 903 aaKnown RBP23.15■■□□□ 1.3
Ccdc34-201ENSMUST00000028580 Rrp1P56183 494 aaKnown RBP23.15■■□□□ 1.3
Ccdc34-201ENSMUST00000028580 Nol10Q5RJG1 687 aaKnown RBP23.15■■□□□ 1.3
Ccdc34-201ENSMUST00000028580 Ifit1Q64282 463 aa23.15■■□□□ 1.3
Ccdc34-201ENSMUST00000028580 Ubxn4Q8VCH8 506 aa23.15■■□□□ 1.3
Ccdc34-201ENSMUST00000028580 Cap2Q9CYT6 476 aa23.15■■□□□ 1.3
Ccdc34-201ENSMUST00000028580 Nav1Q8CH77 1875 aa23.15■■□□□ 1.3
Ccdc34-201ENSMUST00000028580 Gm29094F6Q785 221 aa23.15■■□□□ 1.3
Ccdc34-201ENSMUST00000028580 Polr3gQ6NXY9 223 aa23.15■■□□□ 1.3
Ccdc34-201ENSMUST00000028580 Shisa4Q8CA71 197 aa23.15■■□□□ 1.3
Ccdc34-201ENSMUST00000028580 MthfsQ9D110 203 aa23.15■■□□□ 1.3
Ccdc34-201ENSMUST00000028580 Appbp2Q9DAX9 585 aa23.15■■□□□ 1.3
Ccdc34-201ENSMUST00000028580 Kcnq5Q9JK45 933 aa23.15■■□□□ 1.3
Ccdc34-201ENSMUST00000028580 Col3a1P08121 1464 aa23.14■■□□□ 1.3
Ccdc34-201ENSMUST00000028580 Cavin1O54724 392 aa23.14■■□□□ 1.29
Ccdc34-201ENSMUST00000028580 Cyp19a1P28649 503 aa23.14■■□□□ 1.29
Ccdc34-201ENSMUST00000028580 ErmnQ5EBJ4 281 aa23.14■■□□□ 1.29
Ccdc34-201ENSMUST00000028580 Pknox2Q8BG99 474 aa23.14■■□□□ 1.29
Ccdc34-201ENSMUST00000028580 Map10Q8BJS7 891 aa23.14■■□□□ 1.29
Ccdc34-201ENSMUST00000028580 Col4a3bpQ9EQG9 624 aa23.14■■□□□ 1.29
Ccdc34-201ENSMUST00000028580 Nwd2Q6P5U7 1742 aa23.14■■□□□ 1.29
Ccdc34-201ENSMUST00000028580 Fam160b2Q80YR2 744 aa23.13■■□□□ 1.29
Ccdc34-201ENSMUST00000028580 Akap11E9Q777 1895 aa23.13■■□□□ 1.29
Ccdc34-201ENSMUST00000028580 LyarQ08288 388 aaKnown RBP23.13■■□□□ 1.29
Ccdc34-201ENSMUST00000028580 Smg7Q5RJH6 1138 aaKnown RBP23.13■■□□□ 1.29
Ccdc34-201ENSMUST00000028580 Spty2d1Q68FG3 682 aa23.13■■□□□ 1.29
Ccdc34-201ENSMUST00000028580 ImmtQ8CAQ8 757 aaKnown RBP23.13■■□□□ 1.29
Ccdc34-201ENSMUST00000028580 Snw1Q9CSN1 536 aaKnown RBP23.13■■□□□ 1.29
Ccdc34-201ENSMUST00000028580 Naa16Q9DBB4 864 aa23.13■■□□□ 1.29
Ccdc34-201ENSMUST00000028580 Ccnl1Q52KE7 532 aaKnown RBP23.12■■□□□ 1.29
Ccdc34-201ENSMUST00000028580 Il17raQ60943 864 aa23.12■■□□□ 1.29
Ccdc34-201ENSMUST00000028580 Tsen34Q8BMZ5 316 aa23.12■■□□□ 1.29
Ccdc34-201ENSMUST00000028580 Gimap5Q8BWF2 308 aa23.12■■□□□ 1.29
Ccdc34-201ENSMUST00000028580 Grpel1Q99LP6 217 aa23.12■■□□□ 1.29
Ccdc34-201ENSMUST00000028580 Gm973E9Q295 1059 aa23.12■■□□□ 1.29
Ccdc34-201ENSMUST00000028580 Cep63Q3UPP8 700 aa23.12■■□□□ 1.29
Ccdc34-201ENSMUST00000028580 Fam84aQ9D650 292 aa23.12■■□□□ 1.29
Ccdc34-201ENSMUST00000028580 Telo2Q9DC40 840 aaKnown RBP23.12■■□□□ 1.29
Ccdc34-201ENSMUST00000028580 Ccdc82Q6PG04 518 aa23.11■■□□□ 1.29
Ccdc34-201ENSMUST00000028580 Tulp1Q9Z273 543 aa23.11■■□□□ 1.29
Ccdc34-201ENSMUST00000028580 Tcof1O08784 1320 aaKnown RBP23.11■■□□□ 1.29
Ccdc34-201ENSMUST00000028580 Cdk4P30285 303 aa23.1■■□□□ 1.29
Ccdc34-201ENSMUST00000028580 Gpatch3Q8BIY1 525 aa23.1■■□□□ 1.29
Ccdc34-201ENSMUST00000028580 Zkscan8Q8BSL0 588 aa23.1■■□□□ 1.29
Ccdc34-201ENSMUST00000028580 Adam1bQ8R534 806 aa23.1■■□□□ 1.29
Ccdc34-201ENSMUST00000028580 Stx1aO35526 288 aa23.1■■□□□ 1.29
Ccdc34-201ENSMUST00000028580 Gpr182P43142 395 aa23.1■■□□□ 1.29
Ccdc34-201ENSMUST00000028580 Hook1Q8BIL5 728 aa23.1■■□□□ 1.29
Ccdc34-201ENSMUST00000028580 Alg3Q8K2A8 438 aa23.1■■□□□ 1.29
Ccdc34-201ENSMUST00000028580 Ccne2Q9Z238 404 aa23.1■■□□□ 1.29
Ccdc34-201ENSMUST00000028580 TrhQ62361 256 aa23.09■■□□□ 1.29
Ccdc34-201ENSMUST00000028580 Tmem59lQ7TNI2 337 aa23.09■■□□□ 1.29
Ccdc34-201ENSMUST00000028580 Cfap99A0A140LIX9 648 aa23.09■■□□□ 1.29
Ccdc34-201ENSMUST00000028580 Kcnh4A2A5F7 1018 aa23.09■■□□□ 1.29
Ccdc34-201ENSMUST00000028580 Vmn2r23E9PXI5 849 aa23.09■■□□□ 1.29
Ccdc34-201ENSMUST00000028580 Smim5Q8BT42 78 aa23.09■■□□□ 1.29
Ccdc34-201ENSMUST00000028580 Srek1Q8BZX4 494 aaKnown RBP23.09■■□□□ 1.29
Ccdc34-201ENSMUST00000028580 Alx1Q8C8B0 326 aa23.09■■□□□ 1.29
Ccdc34-201ENSMUST00000028580 Terf2ipQ91VL8 393 aa23.09■■□□□ 1.29
Ccdc34-201ENSMUST00000028580 FosbP13346 338 aa23.08■■□□□ 1.29
Ccdc34-201ENSMUST00000028580 Atp2b3Q0VF55 1220 aa23.08■■□□□ 1.29
Ccdc34-201ENSMUST00000028580 Ube3bQ9ES34 1070 aa23.08■■□□□ 1.29
Ccdc34-201ENSMUST00000028580 Irx4Q9QY61 515 aa23.08■■□□□ 1.29
Ccdc34-201ENSMUST00000028580 Cep55Q8BT07 462 aa23.07■■□□□ 1.28
Ccdc34-201ENSMUST00000028580 Pcdhb15Q91Y04 786 aa23.07■■□□□ 1.28
Ccdc34-201ENSMUST00000028580 Greb1lB9EJV3 1913 aa23.07■■□□□ 1.28
Ccdc34-201ENSMUST00000028580 Ssc5dQ8BV57 1371 aa23.07■■□□□ 1.28
Ccdc34-201ENSMUST00000028580 CebpzP53569 1052 aaKnown RBP23.07■■□□□ 1.28
Ccdc34-201ENSMUST00000028580 ApobrQ8VBT6 942 aa23.07■■□□□ 1.28
Ccdc34-201ENSMUST00000028580 Riok1Q922Q2 567 aa23.07■■□□□ 1.28
Ccdc34-201ENSMUST00000028580 IncenpQ9WU62 880 aa23.07■■□□□ 1.28
Ccdc34-201ENSMUST00000028580 Igflr1Q3U4N7 345 aa23.06■■□□□ 1.28
Ccdc34-201ENSMUST00000028580 Hand2Q61039 217 aa23.06■■□□□ 1.28
Ccdc34-201ENSMUST00000028580 U2af1l4Q8BGJ9 220 aa23.06■■□□□ 1.28
Ccdc34-201ENSMUST00000028580 Ift57Q8BXG3 429 aa23.06■■□□□ 1.28
Ccdc34-201ENSMUST00000028580 GptQ8QZR5 496 aa23.06■■□□□ 1.28
Ccdc34-201ENSMUST00000028580 Cdc45Q9Z1X9 566 aa23.06■■□□□ 1.28
Ccdc34-201ENSMUST00000028580 MetP16056 1379 aa23.06■■□□□ 1.28
Ccdc34-201ENSMUST00000028580 RdxP26043 583 aaKnown RBP23.05■■□□□ 1.28
Ccdc34-201ENSMUST00000028580 Dnaaf2Q8BPI1 814 aa23.05■■□□□ 1.28
Ccdc34-201ENSMUST00000028580 Pcdhb22Q91XZ8 794 aa23.05■■□□□ 1.28
Ccdc34-201ENSMUST00000028580 Dusp10Q9ESS0 483 aa23.05■■□□□ 1.28
Retrieved 100 of 22,080 RNA–protein pairs in 47.4 ms