RNA–Protein interactions for RNA: ENSMUST00000021278.13

Ctc1-201, Transcript of CST complex subunit CTC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ctc1, Length 4,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-201ENSMUST00000021278 CactinQ9CS00 772 aaKnown RBP10.57□□□□□ -0.72
Ctc1-201ENSMUST00000021278 PdhbQ9D051 359 aa10.57□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Chd2E9PZM4 1827 aaKnown RBP10.57□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Iqsec2Q5DU25 1478 aa10.57□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Map3k7clP58500 142 aa10.57□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Spout1Q3UHX9 385 aaKnown RBP10.57□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Ddx46Q569Z5 1032 aaKnown RBP10.57□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Q8CEZ4 452 aa10.57□□□□□ -0.72
Ctc1-201ENSMUST00000021278 1700122O11RikJ3QPW6 241 aa10.57□□□□□ -0.72
Ctc1-201ENSMUST00000021278 CtcfQ61164 736 aaKnown RBP10.57□□□□□ -0.72
Ctc1-201ENSMUST00000021278 ImmtQ8CAQ8 757 aaKnown RBP10.57□□□□□ -0.72
Ctc1-201ENSMUST00000021278 4930449I24RikQ9D5E3 319 aa10.57□□□□□ -0.72
Ctc1-201ENSMUST00000021278 PdclQ9DBX2 301 aa10.57□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Kif13aQ9EQW7 1749 aa10.57□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Pet2A2AHY8 747 aa10.56□□□□□ -0.72
Ctc1-201ENSMUST00000021278 F2rP30558 430 aa10.56□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Slc8a1P70414 970 aa10.56□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Eno4Q8C042 619 aa10.56□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Ccdc80Q8R2G6 949 aa10.56□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Usp33Q8R5K2 909 aa10.56□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Farp2Q91VS8 1065 aa10.56□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Erlin1Q91X78 346 aa10.56□□□□□ -0.72
Ctc1-201ENSMUST00000021278 PigoQ9JJI6 1093 aa10.56□□□□□ -0.72
Ctc1-201ENSMUST00000021278 PtprgQ05909 1442 aa10.56□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Rnf40Q3U319 1001 aa10.56□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Specc1Q5SXY1 1067 aa10.56□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Matr3Q8K310 846 aaKnown RBP10.56□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Ppp1r3fQ9JIG4 799 aa10.56□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Igbp1bQ9QZ29 343 aa10.56□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Nfe2l3Q9WTM4 660 aa10.56□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Myo3aQ8K3H5 1613 aa10.56□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Stx1aO35526 288 aa10.56□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Ccdc160Q3UYG1 323 aa10.56□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Slc30a9Q5IRJ6 567 aa10.56□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Serpinb1cQ5SV42 375 aa10.56□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Ncoa7Q6DFV7 943 aa10.56□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Ctdp1Q7TSG2 960 aa10.56□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Adcy3Q8VHH7 1145 aa10.56□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Rbm5Q91YE7 815 aaKnown RBP10.56□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Clip2Q9Z0H8 1047 aa10.56□□□□□ -0.72
Ctc1-201ENSMUST00000021278 AW822073A0A0N4SUK1 652 aa10.55□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Usp35M0QWN7 1009 aa10.55□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Gjb2Q00977 226 aa10.55□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Gm1604bQ3TRG0 118 aa10.55□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Ddx42Q810A7 929 aaKnown RBP10.55□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Bicdl2Q8CHW5 507 aa10.55□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Enox2Q8R0Z2 598 aa10.55□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Gtf2e1Q9D0D5 440 aa10.55□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Akr1e2Q9DCT1 301 aa10.55□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Edc4Q3UJB9 1406 aaKnown RBP10.55□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Ccdc24E9PUW8 296 aa10.55□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Gas2l3Q3UWW6 683 aa10.55□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Ric3Q8BPM6 367 aa10.55□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Kif2bQ8C0N1 668 aa10.55□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Six6os1Q9CTN5 574 aa10.55□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Nedd9O35177 833 aa10.55□□□□□ -0.72
Ctc1-201ENSMUST00000021278 GscQ02591 256 aa10.55□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Tmed1Q3V009 227 aa10.55□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Rint1Q8BZ36 792 aa10.55□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Usp27Q8CEG8 438 aa10.55□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Kif24Q6NWW5 1356 aa10.55□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Gm28510A0A087WP28 240 aa10.55□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Zkscan2G3X952 960 aa10.55□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Kifap3P70188 793 aa10.55□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Dab2P98078 766 aa10.55□□□□□ -0.72
Ctc1-201ENSMUST00000021278 SfswapQ3USH5 945 aaKnown RBP10.55□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Tango6Q8C3S2 1079 aa10.55□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Cypt1Q8CH20 168 aa10.55□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Phldb2Q8K1N2 1249 aa10.55□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Ctage5Q8R311 779 aa10.55□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Kri1Q8VDQ9 704 aaKnown RBP10.55□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Gcc1Q9D4H2 778 aa10.55□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Clstn1Q9EPL2 979 aa10.55□□□□□ -0.72
Ctc1-201ENSMUST00000021278 MpripP97434 1024 aa10.54□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Trim80Q3V061 624 aa10.54□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Clul1Q3ZRW6 464 aa10.54□□□□□ -0.72
Ctc1-201ENSMUST00000021278 CrebzfQ91ZR3 358 aa10.54□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Sept6Q9R1T4 434 aa10.54□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Rgs22G3UYX5 1258 aa10.54□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Stim1P70302 685 aa10.54□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Kcnb1Q03717 857 aa10.54□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Ccdc158Q8CDI6 1109 aa10.54□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Mbd5B1AYB6 1498 aa10.54□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Pdia3P27773 505 aaKnown RBP10.54□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Esyt1Q3U7R1 1092 aaKnown RBP10.54□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Usp11Q99K46 921 aa10.54□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Chmp3Q9CQ10 224 aa10.54□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Slx4ipQ9D7Y9 413 aa10.54□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Abcb6Q9DC29 842 aa10.54□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Ap3b2Q9JME5 1082 aa10.54□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Myo1eE9Q634 1107 aa10.53□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Myo1fP70248 1099 aa10.53□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Iws1Q8C1D8 766 aa10.53□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Chchd3Q9CRB9 227 aaKnown RBP10.53□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Sugt1Q9CX34 336 aa10.53□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Znf704Q9ERQ3 566 aa10.53□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Nlrp4eQ66X19 978 aa10.53□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Snd1Q78PY7 910 aaKnown RBP10.53□□□□□ -0.72
Ctc1-201ENSMUST00000021278 ApobrQ8VBT6 942 aa10.53□□□□□ -0.72
Ctc1-201ENSMUST00000021278 Sh2b1Q91ZM2 756 aa10.53□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 21.7 ms