RNA–Protein interactions for RNA: ENSMUST00000021039.11

Lig3-201, Transcript of DNA ligase 3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Lig3, Length 5,957 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-201ENSMUST00000021039 Tnip1Q9WUU8 647 aa9.26□□□□□ -0.93
Lig3-201ENSMUST00000021039 Stx8O88983 236 aa9.26□□□□□ -0.93
Lig3-201ENSMUST00000021039 PrimpolQ6P1E7 537 aa9.26□□□□□ -0.93
Lig3-201ENSMUST00000021039 Ubxn4Q8VCH8 506 aa9.26□□□□□ -0.93
Lig3-201ENSMUST00000021039 Ets1P27577 440 aa9.26□□□□□ -0.93
Lig3-201ENSMUST00000021039 Igf2bp2Q5SF07 592 aaKnown RBP9.26□□□□□ -0.93
Lig3-201ENSMUST00000021039 Susd4Q8BH32 490 aa9.26□□□□□ -0.93
Lig3-201ENSMUST00000021039 Ncoa5Q91W39 579 aaKnown RBP9.26□□□□□ -0.93
Lig3-201ENSMUST00000021039 Lmbr1Q9JIT0 490 aa9.26□□□□□ -0.93
Lig3-201ENSMUST00000021039 Ttc41Q692V3 1318 aa9.26□□□□□ -0.93
Lig3-201ENSMUST00000021039 Cyp2c23E9Q5K4 494 aa9.25□□□□□ -0.93
Lig3-201ENSMUST00000021039 Rufy1Q8BIJ7 712 aa9.25□□□□□ -0.93
Lig3-201ENSMUST00000021039 Fbxo3Q9DC63 480 aa9.25□□□□□ -0.93
Lig3-201ENSMUST00000021039 Epb41l3Q9WV92 929 aa9.25□□□□□ -0.93
Lig3-201ENSMUST00000021039 Myo3bQ1EG27 1305 aa9.25□□□□□ -0.93
Lig3-201ENSMUST00000021039 Mdm2P23804 489 aa9.25□□□□□ -0.93
Lig3-201ENSMUST00000021039 Tlr7P58681 1050 aa9.25□□□□□ -0.93
Lig3-201ENSMUST00000021039 Limch1Q3UH68 1057 aa9.25□□□□□ -0.93
Lig3-201ENSMUST00000021039 Exoc8Q6PGF7 716 aa9.25□□□□□ -0.93
Lig3-201ENSMUST00000021039 Podxl2Q8CAE9 603 aa9.25□□□□□ -0.93
Lig3-201ENSMUST00000021039 Gripap1Q8VD04 806 aa9.25□□□□□ -0.93
Lig3-201ENSMUST00000021039 Snapc4Q8BP86 1333 aa9.25□□□□□ -0.93
Lig3-201ENSMUST00000021039 Kif23E9Q5G3 953 aa9.25□□□□□ -0.93
Lig3-201ENSMUST00000021039 Gm4340L7N2C4 268 aa9.25□□□□□ -0.93
Lig3-201ENSMUST00000021039 Map3k12Q60700 888 aa9.25□□□□□ -0.93
Lig3-201ENSMUST00000021039 Appbp2Q9DAX9 585 aa9.25□□□□□ -0.93
Lig3-201ENSMUST00000021039 Gm13023A2A8N2 498 aa9.25□□□□□ -0.93
Lig3-201ENSMUST00000021039 Mybl2P48972 704 aa9.25□□□□□ -0.93
Lig3-201ENSMUST00000021039 NfkbibQ60778 359 aa9.25□□□□□ -0.93
Lig3-201ENSMUST00000021039 Erbb3Q61526 1339 aa9.25□□□□□ -0.93
Lig3-201ENSMUST00000021039 Eddm13E9Q7F5 164 aa9.25□□□□□ -0.93
Lig3-201ENSMUST00000021039 Metap2O08663 478 aaKnown RBP9.25□□□□□ -0.93
Lig3-201ENSMUST00000021039 Taf3Q5HZG4 932 aa9.25□□□□□ -0.93
Lig3-201ENSMUST00000021039 Clca2Q8BG22 942 aa9.25□□□□□ -0.93
Lig3-201ENSMUST00000021039 GnaqP21279 359 aa9.24□□□□□ -0.93
Lig3-201ENSMUST00000021039 Dis3l2Q8CI75 870 aaKnown RBP9.24□□□□□ -0.93
Lig3-201ENSMUST00000021039 Utp3Q9JI13 469 aaKnown RBP9.24□□□□□ -0.93
Lig3-201ENSMUST00000021039 Ppp1r3fQ9JIG4 799 aa9.24□□□□□ -0.93
Lig3-201ENSMUST00000021039 Stxbp4Q9WV89 557 aa9.24□□□□□ -0.93
Lig3-201ENSMUST00000021039 Rad50P70388 1312 aa9.24□□□□□ -0.93
Lig3-201ENSMUST00000021039 Atg4a-psA0A0G2JFS9 396 aa9.24□□□□□ -0.93
Lig3-201ENSMUST00000021039 Pde8bE9Q4S1 865 aa9.24□□□□□ -0.93
Lig3-201ENSMUST00000021039 Znhit6Q3UFB2 460 aaKnown RBP9.24□□□□□ -0.93
Lig3-201ENSMUST00000021039 Cdcp1Q5U462 833 aa9.24□□□□□ -0.93
Lig3-201ENSMUST00000021039 Atg4aQ8C9S8 396 aa9.24□□□□□ -0.93
Lig3-201ENSMUST00000021039 Tshz3Q8CGV9 1081 aa9.24□□□□□ -0.93
Lig3-201ENSMUST00000021039 ZwintQ9CQU5 252 aa9.24□□□□□ -0.93
Lig3-201ENSMUST00000021039 Akt1s1Q9D1F4 257 aa9.24□□□□□ -0.93
Lig3-201ENSMUST00000021039 Pdcd6ipQ9WU78 869 aaKnown RBP9.24□□□□□ -0.93
Lig3-201ENSMUST00000021039 Gja10Q9WUS4 505 aa9.24□□□□□ -0.93
Lig3-201ENSMUST00000021039 Krt85Q9Z2T6 507 aa9.24□□□□□ -0.93
Lig3-201ENSMUST00000021039 Bin2D3Z6Q9 489 aa9.24□□□□□ -0.93
Lig3-201ENSMUST00000021039 Tgfb1i1Q62219 461 aa9.24□□□□□ -0.93
Lig3-201ENSMUST00000021039 Cyp2d12Q8BVD2 504 aa9.24□□□□□ -0.93
Lig3-201ENSMUST00000021039 Arhgef6Q8K4I3 771 aa9.24□□□□□ -0.93
Lig3-201ENSMUST00000021039 LlphQ9D945 130 aaKnown RBP9.24□□□□□ -0.93
Lig3-201ENSMUST00000021039 Gtf2iQ9ESZ8 998 aaKnown RBP9.24□□□□□ -0.93
Lig3-201ENSMUST00000021039 Tbc1d8Q9Z1A9 1134 aa9.24□□□□□ -0.93
Lig3-201ENSMUST00000021039 Hspa2P17156 633 aa9.24□□□□□ -0.93
Lig3-201ENSMUST00000021039 Cdca7Q9D0M2 382 aa9.24□□□□□ -0.93
Lig3-201ENSMUST00000021039 Trmt44Q9D2Q2 713 aa9.24□□□□□ -0.93
Lig3-201ENSMUST00000021039 Edc3Q8K2D3 508 aaKnown RBP9.24□□□□□ -0.93
Lig3-201ENSMUST00000021039 Nap1l5Q9JJF0 156 aa9.24□□□□□ -0.93
Lig3-201ENSMUST00000021039 Stk32bQ9JJX8 414 aa9.24□□□□□ -0.93
Lig3-201ENSMUST00000021039 Gpr182P43142 395 aa9.23□□□□□ -0.93
Lig3-201ENSMUST00000021039 Kif20bQ80WE4 1774 aaKnown RBP9.23□□□□□ -0.93
Lig3-201ENSMUST00000021039 Calm1P0DP26 149 aaKnown RBP9.23□□□□□ -0.93
Lig3-201ENSMUST00000021039 Calm2P0DP27 149 aaKnown RBP9.23□□□□□ -0.93
Lig3-201ENSMUST00000021039 Calm3P0DP28 149 aaKnown RBP9.23□□□□□ -0.93
Lig3-201ENSMUST00000021039 Cnnm3Q32NY4 713 aa9.23□□□□□ -0.93
Lig3-201ENSMUST00000021039 Ripor2Q80U16 1078 aa9.23□□□□□ -0.93
Lig3-201ENSMUST00000021039 Ccdc172Q810N9 267 aa9.23□□□□□ -0.93
Lig3-201ENSMUST00000021039 PaoxQ8C0L6 504 aa9.23□□□□□ -0.93
Lig3-201ENSMUST00000021039 Lrit1Q8K099 624 aa9.23□□□□□ -0.93
Lig3-201ENSMUST00000021039 Itsn1Q9Z0R4 1714 aa9.23□□□□□ -0.93
Lig3-201ENSMUST00000021039 Nucb1Q02819 459 aaKnown RBP9.23□□□□□ -0.93
Lig3-201ENSMUST00000021039 Cyp24a1Q64441 514 aa9.23□□□□□ -0.93
Lig3-201ENSMUST00000021039 Polr3gQ6NXY9 223 aa9.23□□□□□ -0.93
Lig3-201ENSMUST00000021039 Tekt3Q6X6Z7 490 aa9.23□□□□□ -0.93
Lig3-201ENSMUST00000021039 Znf526Q8BI66 675 aa9.23□□□□□ -0.93
Lig3-201ENSMUST00000021039 Stag1Q9D3E6 1258 aa9.23□□□□□ -0.93
Lig3-201ENSMUST00000021039 Cct2P80314 535 aaKnown RBP9.23□□□□□ -0.93
Lig3-201ENSMUST00000021039 Babam1Q3UI43 333 aa9.23□□□□□ -0.93
Lig3-201ENSMUST00000021039 Tmc2Q8R4P4 888 aa9.23□□□□□ -0.93
Lig3-201ENSMUST00000021039 Ak2Q9WTP6 239 aa9.23□□□□□ -0.93
Lig3-201ENSMUST00000021039 Tnrc6bQ8BKI2 1810 aaKnown RBP9.23□□□□□ -0.93
Lig3-201ENSMUST00000021039 Tuft1O08970 390 aa9.22□□□□□ -0.93
Lig3-201ENSMUST00000021039 EvcP57680 1005 aa9.22□□□□□ -0.93
Lig3-201ENSMUST00000021039 Ciapin1Q8WTY4 309 aa9.22□□□□□ -0.93
Lig3-201ENSMUST00000021039 Clip2Q9Z0H8 1047 aa9.22□□□□□ -0.93
Lig3-201ENSMUST00000021039 Setdb1O88974 1307 aa9.22□□□□□ -0.93
Lig3-201ENSMUST00000021039 MypnQ5DTJ9 1315 aa9.22□□□□□ -0.93
Lig3-201ENSMUST00000021039 Gcom1E9PZ54 550 aa9.22□□□□□ -0.93
Lig3-201ENSMUST00000021039 MyzapQ3UIJ9 466 aa9.22□□□□□ -0.93
Lig3-201ENSMUST00000021039 Tbc1d32Q3URV1 1296 aa9.22□□□□□ -0.93
Lig3-201ENSMUST00000021039 PdcQ9QW08 244 aa9.22□□□□□ -0.93
Lig3-201ENSMUST00000021039 MetP16056 1379 aa9.22□□□□□ -0.93
Lig3-201ENSMUST00000021039 Stat1P42225 749 aa9.22□□□□□ -0.93
Lig3-201ENSMUST00000021039 Zbtb45Q52KG4 520 aa9.22□□□□□ -0.93
Lig3-201ENSMUST00000021039 Prpf4bQ61136 1007 aaKnown RBP9.22□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 19.9 ms