RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 CDC40O60508 579 aaKnown RBP eCLIP1.97□□□□□ -2.09
CCDC7-216ENST00000640058 SLC16A7O60669 478 aa1.97□□□□□ -2.09
CCDC7-216ENST00000640058 RAD1O60671 282 aa1.97□□□□□ -2.09
CCDC7-216ENST00000640058 GLSO94925 669 aaPredicted RBP1.97□□□□□ -2.09
CCDC7-216ENST00000640058 TDP2O95551 362 aa1.97□□□□□ -2.09
CCDC7-216ENST00000640058 IGHV3-11P01762 117 aa1.97□□□□□ -2.09
CCDC7-216ENST00000640058 CD37P11049 281 aa1.97□□□□□ -2.09
CCDC7-216ENST00000640058 RALBP11234 206 aa1.97□□□□□ -2.09
CCDC7-216ENST00000640058 GFAPP14136 432 aa1.97□□□□□ -2.09
CCDC7-216ENST00000640058 RAB5AP20339 215 aa1.97□□□□□ -2.09
CCDC7-216ENST00000640058 TUBG1P23258 451 aa1.97□□□□□ -2.09
CCDC7-216ENST00000640058 LOXP28300 417 aaPredicted RBP1.97□□□□□ -2.09
CCDC7-216ENST00000640058 BMI1P35226 326 aa1.97□□□□□ -2.09
CCDC7-216ENST00000640058 MYCNOSP40205 109 aa1.97□□□□□ -2.09
CCDC7-216ENST00000640058 NDUFA8P51970 172 aa1.97□□□□□ -2.09
CCDC7-216ENST00000640058 ZNF266Q14584 549 aa1.97□□□□□ -2.09
CCDC7-216ENST00000640058 HIKESHIQ53FT3 197 aa1.97□□□□□ -2.09
CCDC7-216ENST00000640058 MPV17L2Q567V2 206 aa1.97□□□□□ -2.09
CCDC7-216ENST00000640058 CMTM8Q8IZV2 173 aa1.97□□□□□ -2.09
CCDC7-216ENST00000640058 GPR26Q8NDV2 337 aa1.97□□□□□ -2.09
CCDC7-216ENST00000640058 C19orf18Q8NEA5 215 aa1.97□□□□□ -2.09
CCDC7-216ENST00000640058 PROKR2Q8NFJ6 384 aa1.97□□□□□ -2.09
CCDC7-216ENST00000640058 LILRB4Q8NHJ6 448 aa1.97□□□□□ -2.09
CCDC7-216ENST00000640058 ITFG1Q8TB96 612 aa1.97□□□□□ -2.09
CCDC7-216ENST00000640058 ZNF707Q96C28 371 aaPredicted RBP1.97□□□□□ -2.09
CCDC7-216ENST00000640058 TEAD3Q99594 435 aa1.97□□□□□ -2.09
CCDC7-216ENST00000640058 UQCC2Q9BRT2 126 aa1.97□□□□□ -2.09
CCDC7-216ENST00000640058 AGMATQ9BSE5 352 aa1.97□□□□□ -2.09
CCDC7-216ENST00000640058 GGTLC1Q9BX51 225 aa1.97□□□□□ -2.09
CCDC7-216ENST00000640058 TOLLIPQ9H0E2 274 aa1.97□□□□□ -2.09
CCDC7-216ENST00000640058 SLC38A10Q9HBR0 1119 aa1.97□□□□□ -2.09
CCDC7-216ENST00000640058 MYOZ1Q9NP98 299 aaPredicted RBP1.97□□□□□ -2.09
CCDC7-216ENST00000640058 RRAGDQ9NQL2 400 aaPredicted RBP1.97□□□□□ -2.09
CCDC7-216ENST00000640058 PXMP2Q9NR77 195 aa1.97□□□□□ -2.09
CCDC7-216ENST00000640058 TUBG2Q9NRH3 451 aa1.97□□□□□ -2.09
CCDC7-216ENST00000640058 RGS18Q9NS28 235 aa1.97□□□□□ -2.09
CCDC7-216ENST00000640058 ZNF257Q9Y2Q1 563 aa1.97□□□□□ -2.09
CCDC7-216ENST00000640058 COMMD3-BMI1R4GMX3 469 aa1.97□□□□□ -2.09
CCDC7-216ENST00000640058 IGKV1-27A0A075B6S5 117 aa1.96□□□□□ -2.1
CCDC7-216ENST00000640058 TRAV19A0A0A6YYK7 116 aa1.96□□□□□ -2.1
CCDC7-216ENST00000640058 SLC22A20A6NK97 555 aa1.96□□□□□ -2.1
CCDC7-216ENST00000640058 TRDMT1O14717 391 aaKnown RBP1.96□□□□□ -2.1
CCDC7-216ENST00000640058 CHST10O43529 356 aa1.96□□□□□ -2.1
CCDC7-216ENST00000640058 SCELO95171 688 aa1.96□□□□□ -2.1
CCDC7-216ENST00000640058 HTR1DP28221 377 aa1.96□□□□□ -2.1
CCDC7-216ENST00000640058 TGFBR1P36897 503 aa1.96□□□□□ -2.1
CCDC7-216ENST00000640058 POLR2IP36954 125 aaKnown RBP1.96□□□□□ -2.1
CCDC7-216ENST00000640058 TAS2R31P59538 309 aa1.96□□□□□ -2.1
CCDC7-216ENST00000640058 ZNF33AQ06730 810 aa1.96□□□□□ -2.1
CCDC7-216ENST00000640058 PPIDQ08752 370 aaKnown RBP1.96□□□□□ -2.1
CCDC7-216ENST00000640058 SIGLEC14Q08ET2 396 aa1.96□□□□□ -2.1
CCDC7-216ENST00000640058 BAMBIQ13145 260 aa1.96□□□□□ -2.1
CCDC7-216ENST00000640058 DNAJC3Q13217 504 aa1.96□□□□□ -2.1
CCDC7-216ENST00000640058 IL15RAQ13261 267 aa1.96□□□□□ -2.1
CCDC7-216ENST00000640058 PNOCQ13519 176 aa1.96□□□□□ -2.1
CCDC7-216ENST00000640058 RBMY1FQ15415 496 aaKnown RBP1.96□□□□□ -2.1
CCDC7-216ENST00000640058 GABRA6Q16445 453 aa1.96□□□□□ -2.1
CCDC7-216ENST00000640058 ZNF829Q3KNS6 432 aaPredicted RBP1.96□□□□□ -2.1
CCDC7-216ENST00000640058 RWDD4Q6NW29 188 aaKnown RBP1.96□□□□□ -2.1
CCDC7-216ENST00000640058 ZFP1Q6P2D0 407 aa1.96□□□□□ -2.1
CCDC7-216ENST00000640058 SNX31Q8N9S9 440 aa1.96□□□□□ -2.1
CCDC7-216ENST00000640058 INO80EQ8NBZ0 244 aaPredicted RBP1.96□□□□□ -2.1
CCDC7-216ENST00000640058 OR1P1Q8NH06 330 aa1.96□□□□□ -2.1
CCDC7-216ENST00000640058 RAB1CQ92928 201 aa1.96□□□□□ -2.1
CCDC7-216ENST00000640058 HAUS1Q96CS2 278 aa1.96□□□□□ -2.1
CCDC7-216ENST00000640058 KCNS1Q96KK3 526 aa1.96□□□□□ -2.1
CCDC7-216ENST00000640058 FAM19A4Q96LR4 140 aa1.96□□□□□ -2.1
CCDC7-216ENST00000640058 CSPG4P5Q96PW8 444 aa1.96□□□□□ -2.1
CCDC7-216ENST00000640058 RBBP8Q99708 897 aa1.96□□□□□ -2.1
CCDC7-216ENST00000640058 RHBDD3Q9Y3P4 386 aa1.96□□□□□ -2.1
CCDC7-216ENST00000640058 PLEKHG2Q9H7P9 1386 aa1.96□□□□□ -2.1
CCDC7-216ENST00000640058 DYSFO75923 2080 aa1.95□□□□□ -2.1
CCDC7-216ENST00000640058 SMIM26A0A096LP01 95 aa1.95□□□□□ -2.1
CCDC7-216ENST00000640058 A0A1B0GUH1 482 aa1.95□□□□□ -2.1
CCDC7-216ENST00000640058 C5orf63A6NC05 138 aa1.95□□□□□ -2.1
CCDC7-216ENST00000640058 GABRR3A8MPY1 467 aa1.95□□□□□ -2.1
CCDC7-216ENST00000640058 CTNSO60931 367 aa1.95□□□□□ -2.1
CCDC7-216ENST00000640058 FARS2O95363 451 aaKnown RBP1.95□□□□□ -2.1
CCDC7-216ENST00000640058 IGLV3-25P01717 112 aa1.95□□□□□ -2.1
CCDC7-216ENST00000640058 KRT16P08779 473 aa1.95□□□□□ -2.1
CCDC7-216ENST00000640058 ZNF688P0C7X2 276 aa1.95□□□□□ -2.1
CCDC7-216ENST00000640058 OR2B8PP59922 312 aa1.95□□□□□ -2.1
CCDC7-216ENST00000640058 KDSRQ06136 332 aa1.95□□□□□ -2.1
CCDC7-216ENST00000640058 C5orf64Q2M2E5 130 aa1.95□□□□□ -2.1
CCDC7-216ENST00000640058 ANGPTL8Q6UXH0 198 aa1.95□□□□□ -2.1
CCDC7-216ENST00000640058 UNQ9165/PRO28630Q6UXU0 137 aa1.95□□□□□ -2.1
CCDC7-216ENST00000640058 RTL4Q6ZR62 310 aa1.95□□□□□ -2.1
CCDC7-216ENST00000640058 SPANXA2-OT1Q8N9U9 137 aa1.95□□□□□ -2.1
CCDC7-216ENST00000640058 OR4M1Q8NGD0 313 aa1.95□□□□□ -2.1
CCDC7-216ENST00000640058 SLC25A46Q96AG3 418 aa1.95□□□□□ -2.1
CCDC7-216ENST00000640058 RSG1Q9BU20 258 aa1.95□□□□□ -2.1
CCDC7-216ENST00000640058 TMEM243Q9BU79 118 aa1.95□□□□□ -2.1
CCDC7-216ENST00000640058 IL22Q9GZX6 179 aa1.95□□□□□ -2.1
CCDC7-216ENST00000640058 OR2AG1Q9H205 316 aa1.95□□□□□ -2.1
CCDC7-216ENST00000640058 BLZF1Q9H2G9 400 aa1.95□□□□□ -2.1
CCDC7-216ENST00000640058 TDRD3Q9H7E2 651 aaKnown RBP1.95□□□□□ -2.1
CCDC7-216ENST00000640058 PLEKHF2Q9H8W4 249 aa1.95□□□□□ -2.1
CCDC7-216ENST00000640058 EXOSC4Q9NPD3 245 aaKnown RBP1.95□□□□□ -2.1
CCDC7-216ENST00000640058 TREX1Q9NSU2 369 aa1.95□□□□□ -2.1
CCDC7-216ENST00000640058 ITGB4P16144 1822 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms