RNA–Protein interactions for RNA: ENST00000628306.2

CAPNS1-216, Transcript of calpain small subunit 1, humanhuman

TSL 5 BASIC

Gene CAPNS1, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-216ENST00000628306 TBRG1Q3YBR2 411 aa20.69■□□□□ 0.9
CAPNS1-216ENST00000628306 PHYHD1Q5SRE7 291 aa20.69■□□□□ 0.9
CAPNS1-216ENST00000628306 C22orf42Q6IC83 251 aa20.69■□□□□ 0.9
CAPNS1-216ENST00000628306 DCXRQ7Z4W1 244 aa20.69■□□□□ 0.9
CAPNS1-216ENST00000628306 GPR137CQ8N3F9 429 aa20.69■□□□□ 0.9
CAPNS1-216ENST00000628306 OR2AJ1Q8NGZ0 328 aa20.69■□□□□ 0.9
CAPNS1-216ENST00000628306 THRSPQ92748 146 aa20.69■□□□□ 0.9
CAPNS1-216ENST00000628306 MAP6Q96JE9 813 aa20.69■□□□□ 0.9
CAPNS1-216ENST00000628306 VRK1Q99986 396 aaPredicted RBP20.69■□□□□ 0.9
CAPNS1-216ENST00000628306 GRIP1Q9Y3R0 1128 aa20.69■□□□□ 0.9
CAPNS1-216ENST00000628306 PNMA8CA0A1B0GUJ8 204 aa20.68■□□□□ 0.9
CAPNS1-216ENST00000628306 OPRL1P41146 370 aa20.68■□□□□ 0.9
CAPNS1-216ENST00000628306 HIST1H3AP68431 136 aa20.68■□□□□ 0.9
CAPNS1-216ENST00000628306 SLC3A1Q07837 685 aa20.68■□□□□ 0.9
CAPNS1-216ENST00000628306 HIST2H3PS2Q5TEC6 136 aa20.68■□□□□ 0.9
CAPNS1-216ENST00000628306 HIST2H3AQ71DI3 136 aa20.68■□□□□ 0.9
CAPNS1-216ENST00000628306 OR1K1Q8NGR3 316 aa20.68■□□□□ 0.9
CAPNS1-216ENST00000628306 OR2G2Q8NGZ5 317 aa20.68■□□□□ 0.9
CAPNS1-216ENST00000628306 TBC1D15Q8TC07 691 aa20.68■□□□□ 0.9
CAPNS1-216ENST00000628306 BCL2L2Q92843 193 aaPredicted RBP20.68■□□□□ 0.9
CAPNS1-216ENST00000628306 RNF167Q9H6Y7 350 aa20.68■□□□□ 0.9
CAPNS1-216ENST00000628306 OBP2BQ9NPH6 170 aa20.68■□□□□ 0.9
CAPNS1-216ENST00000628306 MEGF8Q7Z7M0 2845 aa20.67■□□□□ 0.9
CAPNS1-216ENST00000628306 A0A075B6Q4 140 aa20.67■□□□□ 0.9
CAPNS1-216ENST00000628306 TMEM212A6NML5 194 aa20.67■□□□□ 0.9
CAPNS1-216ENST00000628306 B9A039 149 aa20.67■□□□□ 0.9
CAPNS1-216ENST00000628306 IGLV1-44P01699 117 aa20.67■□□□□ 0.9
CAPNS1-216ENST00000628306 OR4A8P0C604 315 aa20.67■□□□□ 0.9
CAPNS1-216ENST00000628306 TGFBR1P36897 503 aa20.67■□□□□ 0.9
CAPNS1-216ENST00000628306 RPS19P39019 145 aaKnown RBP20.67■□□□□ 0.9
CAPNS1-216ENST00000628306 RPS27P42677 84 aaKnown RBP20.67■□□□□ 0.9
CAPNS1-216ENST00000628306 MTNR1BP49286 362 aa20.67■□□□□ 0.9
CAPNS1-216ENST00000628306 PPOXP50336 477 aa20.67■□□□□ 0.9
CAPNS1-216ENST00000628306 MMP16P51512 607 aa20.67■□□□□ 0.9
CAPNS1-216ENST00000628306 NANOS3P60323 173 aaKnown RBP20.67■□□□□ 0.9
CAPNS1-216ENST00000628306 NAAAQ02083 359 aa20.67■□□□□ 0.9
CAPNS1-216ENST00000628306 HGFACQ04756 655 aa20.67■□□□□ 0.9
CAPNS1-216ENST00000628306 MOGQ16653 247 aa20.67■□□□□ 0.9
CAPNS1-216ENST00000628306 ACSM3Q53FZ2 586 aa20.67■□□□□ 0.9
CAPNS1-216ENST00000628306 MYPOPQ86VE0 399 aaPredicted RBP20.67■□□□□ 0.9
CAPNS1-216ENST00000628306 TPRA1Q86W33 373 aa20.67■□□□□ 0.9
CAPNS1-216ENST00000628306 NABP1Q96AH0 204 aa20.67■□□□□ 0.9
CAPNS1-216ENST00000628306 FRRS1LQ9P0K9 344 aa20.67■□□□□ 0.9
CAPNS1-216ENST00000628306 LHFPL6Q9Y693 200 aa20.67■□□□□ 0.9
CAPNS1-216ENST00000628306 OR4C45A6NMZ5 311 aa20.66■□□□□ 0.9
CAPNS1-216ENST00000628306 WIPF1O43516 503 aa20.66■□□□□ 0.9
CAPNS1-216ENST00000628306 CECR9P0C854 216 aa20.66■□□□□ 0.9
CAPNS1-216ENST00000628306 PSMB10P40306 273 aa20.66■□□□□ 0.9
CAPNS1-216ENST00000628306 RORCP51449 518 aa20.66■□□□□ 0.9
CAPNS1-216ENST00000628306 IDH3GP51553 393 aaPredicted RBP20.66■□□□□ 0.9
CAPNS1-216ENST00000628306 RPS11P62280 158 aaKnown RBP eCLIP20.66■□□□□ 0.9
CAPNS1-216ENST00000628306 ZNF404Q494X3 552 aa20.66■□□□□ 0.9
CAPNS1-216ENST00000628306 ANKRD16Q6P6B7 361 aa20.66■□□□□ 0.9
CAPNS1-216ENST00000628306 KLHL24Q6TFL4 600 aa20.66■□□□□ 0.9
CAPNS1-216ENST00000628306 LRRN1Q6UXK5 716 aa20.66■□□□□ 0.9
CAPNS1-216ENST00000628306 SYT9Q86SS6 491 aa20.66■□□□□ 0.9
CAPNS1-216ENST00000628306 SLC25A46Q96AG3 418 aa20.66■□□□□ 0.9
CAPNS1-216ENST00000628306 SLAMF6Q96DU3 332 aa20.66■□□□□ 0.9
CAPNS1-216ENST00000628306 TTTY10Q9BZA0 68 aa20.66■□□□□ 0.9
CAPNS1-216ENST00000628306 TRAV1-2A0A0B4J238 106 aa20.65■□□□□ 0.9
CAPNS1-216ENST00000628306 SRSF10O75494 262 aaKnown RBP20.65■□□□□ 0.9
CAPNS1-216ENST00000628306 ARL6IP5O75915 188 aa20.65■□□□□ 0.9
CAPNS1-216ENST00000628306 ZFPL1O95159 310 aa20.65■□□□□ 0.9
CAPNS1-216ENST00000628306 CDAP32320 146 aa20.65■□□□□ 0.9
CAPNS1-216ENST00000628306 ZNF627Q7L945 461 aa20.65■□□□□ 0.9
CAPNS1-216ENST00000628306 ZCCHC24Q8N2G6 241 aaKnown RBP20.65■□□□□ 0.9
CAPNS1-216ENST00000628306 GJC3Q8NFK1 279 aa20.65■□□□□ 0.9
CAPNS1-216ENST00000628306 OR5AK2Q8NH90 309 aa20.65■□□□□ 0.9
CAPNS1-216ENST00000628306 C4orf45Q96LM5 186 aa20.65■□□□□ 0.9
CAPNS1-216ENST00000628306 GPR35Q9HC97 309 aa20.65■□□□□ 0.9
CAPNS1-216ENST00000628306 LRP12Q9Y561 859 aa20.65■□□□□ 0.9
CAPNS1-216ENST00000628306 R4GMQ9 66 aa20.65■□□□□ 0.9
CAPNS1-216ENST00000628306 PSMD9O00233 223 aa20.64■□□□□ 0.89
CAPNS1-216ENST00000628306 TCF21O43680 179 aa20.64■□□□□ 0.89
CAPNS1-216ENST00000628306 CST2P09228 141 aa20.64■□□□□ 0.89
CAPNS1-216ENST00000628306 H2BFMP0C1H6 154 aa20.64■□□□□ 0.89
CAPNS1-216ENST00000628306 SGCAQ16586 387 aa20.64■□□□□ 0.89
CAPNS1-216ENST00000628306 C3orf36Q3SXR2 165 aa20.64■□□□□ 0.89
CAPNS1-216ENST00000628306 CEACAM19Q7Z692 300 aa20.64■□□□□ 0.89
CAPNS1-216ENST00000628306 ZSCAN2Q7Z7L9 614 aaPredicted RBP20.64■□□□□ 0.89
CAPNS1-216ENST00000628306 HIST2H2ABQ8IUE6 130 aaPredicted RBP20.64■□□□□ 0.89
CAPNS1-216ENST00000628306 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP20.64■□□□□ 0.89
CAPNS1-216ENST00000628306 ALKBH3Q96Q83 286 aaPredicted RBP20.64■□□□□ 0.89
CAPNS1-216ENST00000628306 COMMD4Q9H0A8 199 aa20.64■□□□□ 0.89
CAPNS1-216ENST00000628306 CRLF2Q9HC73 371 aa20.64■□□□□ 0.89
CAPNS1-216ENST00000628306 TMEM38BQ9NVV0 291 aa20.64■□□□□ 0.89
CAPNS1-216ENST00000628306 ACOD1A6NK06 481 aa20.63■□□□□ 0.89
CAPNS1-216ENST00000628306 ZNF878C9JN71 531 aa20.63■□□□□ 0.89
CAPNS1-216ENST00000628306 RPP14O95059 124 aaKnown RBP20.63■□□□□ 0.89
CAPNS1-216ENST00000628306 CDRT1O95170 752 aa20.63■□□□□ 0.89
CAPNS1-216ENST00000628306 CRYAAP02489 173 aa20.63■□□□□ 0.89
CAPNS1-216ENST00000628306 CELA3BP08861 270 aa20.63■□□□□ 0.89
CAPNS1-216ENST00000628306 UCHL1P09936 223 aa20.63■□□□□ 0.89
CAPNS1-216ENST00000628306 MAPK3P27361 379 aaPredicted RBP20.63■□□□□ 0.89
CAPNS1-216ENST00000628306 RIN1Q13671 783 aa20.63■□□□□ 0.89
CAPNS1-216ENST00000628306 ENDOGQ14249 297 aaKnown RBP20.63■□□□□ 0.89
CAPNS1-216ENST00000628306 ZNF829Q3KNS6 432 aaPredicted RBP20.63■□□□□ 0.89
CAPNS1-216ENST00000628306 ZMAT1Q5H9K5 638 aa20.63■□□□□ 0.89
CAPNS1-216ENST00000628306 VHLLQ6RSH7 139 aa20.63■□□□□ 0.89
CAPNS1-216ENST00000628306 CATSPERDQ86XM0 798 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms