RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 PNRC2Q9NPJ4 139 aaKnown RBP5.4□□□□□ -1.54
TCF4-249ENST00000625716 PAPOLBQ9NRJ5 636 aaKnown RBP5.4□□□□□ -1.54
TCF4-249ENST00000625716 DDX28Q9NUL7 540 aaKnown RBP5.4□□□□□ -1.54
TCF4-249ENST00000625716 H2AFY2Q9P0M6 372 aaPredicted RBP5.4□□□□□ -1.54
TCF4-249ENST00000625716 AP4S1Q9Y587 144 aa5.4□□□□□ -1.54
TCF4-249ENST00000625716 A0A0G2JMP0 313 aa5.39□□□□□ -1.55
TCF4-249ENST00000625716 A0A0X1KG70 313 aa5.39□□□□□ -1.55
TCF4-249ENST00000625716 ANKRD30BLA7E2S9 258 aa5.39□□□□□ -1.55
TCF4-249ENST00000625716 RNF212BA8MTL3 300 aa5.39□□□□□ -1.55
TCF4-249ENST00000625716 F5H5P2 479 aa5.39□□□□□ -1.55
TCF4-249ENST00000625716 PRODHO43272 600 aa5.39□□□□□ -1.55
TCF4-249ENST00000625716 XRCC2O43543 280 aa5.39□□□□□ -1.55
TCF4-249ENST00000625716 PLPP2O43688 288 aa5.39□□□□□ -1.55
TCF4-249ENST00000625716 GMDSO60547 372 aa5.39□□□□□ -1.55
TCF4-249ENST00000625716 FOXH1O75593 365 aa5.39□□□□□ -1.55
TCF4-249ENST00000625716 PNPP00491 289 aa5.39□□□□□ -1.55
TCF4-249ENST00000625716 IGHV2-5P01817 119 aa5.39□□□□□ -1.55
TCF4-249ENST00000625716 LYNP07948 512 aa5.39□□□□□ -1.55
TCF4-249ENST00000625716 CFL1P23528 166 aaKnown RBP5.39□□□□□ -1.55
TCF4-249ENST00000625716 THBS2P35442 1172 aa5.39□□□□□ -1.55
TCF4-249ENST00000625716 MDH2P40926 338 aaKnown RBP5.39□□□□□ -1.55
TCF4-249ENST00000625716 CX3CR1P49238 355 aa5.39□□□□□ -1.55
TCF4-249ENST00000625716 CRISP1P54107 249 aa5.39□□□□□ -1.55
TCF4-249ENST00000625716 BTG1P62324 171 aa5.39□□□□□ -1.55
TCF4-249ENST00000625716 ESRRGP62508 458 aa5.39□□□□□ -1.55
TCF4-249ENST00000625716 CDK5Q00535 292 aa5.39□□□□□ -1.55
TCF4-249ENST00000625716 SNCBQ16143 134 aa5.39□□□□□ -1.55
TCF4-249ENST00000625716 PCK2Q16822 640 aa5.39□□□□□ -1.55
TCF4-249ENST00000625716 TIGD6Q17RP2 521 aa5.39□□□□□ -1.55
TCF4-249ENST00000625716 RSPO1Q2MKA7 263 aaPredicted RBP5.39□□□□□ -1.55
TCF4-249ENST00000625716 SPRNQ5BIV9 151 aa5.39□□□□□ -1.55
TCF4-249ENST00000625716 SLC35D3Q5M8T2 416 aa5.39□□□□□ -1.55
TCF4-249ENST00000625716 LCN1P1Q5VSP4 162 aa5.39□□□□□ -1.55
TCF4-249ENST00000625716 DCAF12L2Q5VW00 463 aa5.39□□□□□ -1.55
TCF4-249ENST00000625716 LIPNQ5VXI9 398 aa5.39□□□□□ -1.55
TCF4-249ENST00000625716 CCDC121Q6ZUS5 278 aa5.39□□□□□ -1.55
TCF4-249ENST00000625716 CXXC5Q7LFL8 322 aaKnown RBP5.39□□□□□ -1.55
TCF4-249ENST00000625716 MOGAT3Q86VF5 341 aa5.39□□□□□ -1.55
TCF4-249ENST00000625716 CPOQ8IVL8 374 aa5.39□□□□□ -1.55
TCF4-249ENST00000625716 C10orf67Q8IYJ2 551 aa5.39□□□□□ -1.55
TCF4-249ENST00000625716 HS3ST5Q8IZT8 346 aa5.39□□□□□ -1.55
TCF4-249ENST00000625716 SPERTQ8NA61 448 aa5.39□□□□□ -1.55
TCF4-249ENST00000625716 OR4M2Q8NGB6 313 aa5.39□□□□□ -1.55
TCF4-249ENST00000625716 OR10S1Q8NGN2 331 aa5.39□□□□□ -1.55
TCF4-249ENST00000625716 OR2AE1Q8NHA4 323 aa5.39□□□□□ -1.55
TCF4-249ENST00000625716 ERGIC1Q969X5 290 aa5.39□□□□□ -1.55
TCF4-249ENST00000625716 ZMYND19Q96E35 227 aaPredicted RBP5.39□□□□□ -1.55
TCF4-249ENST00000625716 SLC30A2Q9BRI3 323 aa5.39□□□□□ -1.55
TCF4-249ENST00000625716 OR10A2Q9H208 303 aa5.39□□□□□ -1.55
TCF4-249ENST00000625716 KRT84Q9NSB2 600 aa5.39□□□□□ -1.55
TCF4-249ENST00000625716 C14orf119Q9NWQ9 140 aa5.39□□□□□ -1.55
TCF4-249ENST00000625716 TVP23BQ9NYZ1 205 aa5.39□□□□□ -1.55
TCF4-249ENST00000625716 ENOPH1Q9UHY7 261 aa5.39□□□□□ -1.55
TCF4-249ENST00000625716 LAMP5Q9UJQ1 280 aa5.39□□□□□ -1.55
TCF4-249ENST00000625716 PPIAL4EA0A075B759 164 aa5.38□□□□□ -1.55
TCF4-249ENST00000625716 IGHV3-64DA0A0J9YX35 117 aa5.38□□□□□ -1.55
TCF4-249ENST00000625716 CD300LBA8K4G0 201 aa5.38□□□□□ -1.55
TCF4-249ENST00000625716 PPIAL4DF5H284 164 aa5.38□□□□□ -1.55
TCF4-249ENST00000625716 H0YL77 283 aa5.38□□□□□ -1.55
TCF4-249ENST00000625716 TMEM178BH3BS89 294 aa5.38□□□□□ -1.55
TCF4-249ENST00000625716 J3QLI3 93 aa5.38□□□□□ -1.55
TCF4-249ENST00000625716 PHF1O43189 567 aaPredicted RBP5.38□□□□□ -1.55
TCF4-249ENST00000625716 IGHV2-70P01814 119 aa5.38□□□□□ -1.55
TCF4-249ENST00000625716 HLA-DPB1P04440 258 aa5.38□□□□□ -1.55
TCF4-249ENST00000625716 PPIAL4FP0DN26 164 aa5.38□□□□□ -1.55
TCF4-249ENST00000625716 SLC2A1P11166 492 aa5.38□□□□□ -1.55
TCF4-249ENST00000625716 CA6P23280 308 aa5.38□□□□□ -1.55
TCF4-249ENST00000625716 GATA3P23771 443 aa5.38□□□□□ -1.55
TCF4-249ENST00000625716 OTX1P32242 354 aaPredicted RBP5.38□□□□□ -1.55
TCF4-249ENST00000625716 GNALP38405 381 aa5.38□□□□□ -1.55
TCF4-249ENST00000625716 DDOSTP39656 456 aa5.38□□□□□ -1.55
TCF4-249ENST00000625716 NAA10P41227 235 aaPredicted RBP5.38□□□□□ -1.55
TCF4-249ENST00000625716 DAPP51397 102 aa5.38□□□□□ -1.55
TCF4-249ENST00000625716 ACTR3P61158 418 aa5.38□□□□□ -1.55
TCF4-249ENST00000625716 LCN2P80188 198 aa5.38□□□□□ -1.55
TCF4-249ENST00000625716 ZNF92Q03936 586 aa5.38□□□□□ -1.55
TCF4-249ENST00000625716 APOFQ13790 326 aa5.38□□□□□ -1.55
TCF4-249ENST00000625716 PTGES3Q15185 160 aaKnown RBP5.38□□□□□ -1.55
TCF4-249ENST00000625716 ATP6AP1Q15904 470 aa5.38□□□□□ -1.55
TCF4-249ENST00000625716 GFOD2Q3B7J2 385 aa5.38□□□□□ -1.55
TCF4-249ENST00000625716 SNAI3Q3KNW1 292 aa5.38□□□□□ -1.55
TCF4-249ENST00000625716 TMEM155Q4W5P6 130 aa5.38□□□□□ -1.55
TCF4-249ENST00000625716 ESCO2Q56NI9 601 aa5.38□□□□□ -1.55
TCF4-249ENST00000625716 GLYATL3Q5SZD4 288 aa5.38□□□□□ -1.55
TCF4-249ENST00000625716 LINC01590Q5TEZ4 76 aa5.38□□□□□ -1.55
TCF4-249ENST00000625716 TMEM236Q5W0B7 351 aa5.38□□□□□ -1.55
TCF4-249ENST00000625716 KCTD18Q6PI47 426 aaPredicted RBP5.38□□□□□ -1.55
TCF4-249ENST00000625716 FAM57BQ71RH2 274 aa5.38□□□□□ -1.55
TCF4-249ENST00000625716 RHOUQ7L0Q8 258 aa5.38□□□□□ -1.55
TCF4-249ENST00000625716 KRT77Q7Z794 578 aa5.38□□□□□ -1.55
TCF4-249ENST00000625716 LRRC28Q86X40 367 aaPredicted RBP5.38□□□□□ -1.55
TCF4-249ENST00000625716 KLBQ86Z14 1044 aa5.38□□□□□ -1.55
TCF4-249ENST00000625716 PARP8Q8N3A8 854 aa5.38□□□□□ -1.55
TCF4-249ENST00000625716 FTMTQ8N4E7 242 aa5.38□□□□□ -1.55
TCF4-249ENST00000625716 CELF2-AS1Q8N7Q2 184 aa5.38□□□□□ -1.55
TCF4-249ENST00000625716 OR52H1Q8NGJ2 320 aa5.38□□□□□ -1.55
TCF4-249ENST00000625716 OR8S1Q8NH09 359 aa5.38□□□□□ -1.55
TCF4-249ENST00000625716 OTOSQ8NHW6 89 aa5.38□□□□□ -1.55
TCF4-249ENST00000625716 ZNF420Q8TAQ5 688 aaPredicted RBP5.38□□□□□ -1.55
TCF4-249ENST00000625716 RNF133Q8WVZ7 376 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms