RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 PGA4P0DJD7 388 aa13.69□□□□□ -0.22
COL5A1-208ENST00000618395 PGA5P0DJD9 388 aa13.69□□□□□ -0.22
COL5A1-208ENST00000618395 OR5AC1P0C628 307 aa13.69□□□□□ -0.22
COL5A1-208ENST00000618395 DLX1P56177 255 aa13.69□□□□□ -0.22
COL5A1-208ENST00000618395 ZNF273Q14593 569 aa13.69□□□□□ -0.22
COL5A1-208ENST00000618395 ACOT4Q8N9L9 421 aa13.69□□□□□ -0.22
COL5A1-208ENST00000618395 TIMM9Q9Y5J7 89 aa13.69□□□□□ -0.22
COL5A1-208ENST00000618395 MPC2O95563 127 aa13.69□□□□□ -0.22
COL5A1-208ENST00000618395 NMUP48645 174 aa13.69□□□□□ -0.22
COL5A1-208ENST00000618395 AMMECR1LQ6DCA0 310 aa13.69□□□□□ -0.22
COL5A1-208ENST00000618395 PARM1Q6UWI2 310 aa13.69□□□□□ -0.22
COL5A1-208ENST00000618395 C17orf78Q8N4C9 275 aa13.69□□□□□ -0.22
COL5A1-208ENST00000618395 SLC17A9Q9BYT1 436 aa13.69□□□□□ -0.22
COL5A1-208ENST00000618395 MAGT1Q9H0U3 335 aa13.69□□□□□ -0.22
COL5A1-208ENST00000618395 FZD8Q9H461 694 aa13.69□□□□□ -0.22
COL5A1-208ENST00000618395 CD207Q9UJ71 328 aa13.69□□□□□ -0.22
COL5A1-208ENST00000618395 PQLC2LA1A4F0 135 aa13.69□□□□□ -0.22
COL5A1-208ENST00000618395 CST7O76096 145 aa13.69□□□□□ -0.22
COL5A1-208ENST00000618395 IL24Q13007 206 aa13.69□□□□□ -0.22
COL5A1-208ENST00000618395 TAS2R4Q9NYW5 299 aa13.69□□□□□ -0.22
COL5A1-208ENST00000618395 CER1O95813 267 aa13.69□□□□□ -0.22
COL5A1-208ENST00000618395 C8AP07357 584 aa13.69□□□□□ -0.22
COL5A1-208ENST00000618395 ASCL1P50553 236 aa13.69□□□□□ -0.22
COL5A1-208ENST00000618395 AQP6Q13520 282 aa13.69□□□□□ -0.22
COL5A1-208ENST00000618395 NEIL2Q969S2 332 aa13.69□□□□□ -0.22
COL5A1-208ENST00000618395 ACER3Q9NUN7 267 aa13.69□□□□□ -0.22
COL5A1-208ENST00000618395 TMEM131LA2VDJ0 1609 aa13.69□□□□□ -0.22
COL5A1-208ENST00000618395 FOXE1O00358 373 aaPredicted RBP13.69□□□□□ -0.22
COL5A1-208ENST00000618395 SPINT3P49223 89 aa13.69□□□□□ -0.22
COL5A1-208ENST00000618395 UMODL1-AS1Q8N2C9 162 aa13.69□□□□□ -0.22
COL5A1-208ENST00000618395 NUBPLQ8TB37 319 aa13.69□□□□□ -0.22
COL5A1-208ENST00000618395 OR2A5Q96R48 311 aa13.69□□□□□ -0.22
COL5A1-208ENST00000618395 S1PR3Q99500 378 aa13.69□□□□□ -0.22
COL5A1-208ENST00000618395 A0A1W2PPE2 198 aa13.68□□□□□ -0.22
COL5A1-208ENST00000618395 SKP2Q13309 424 aa13.68□□□□□ -0.22
COL5A1-208ENST00000618395 ZNF77Q15935 545 aa13.68□□□□□ -0.22
COL5A1-208ENST00000618395 RTP2Q5QGT7 225 aa13.68□□□□□ -0.22
COL5A1-208ENST00000618395 SUSD3Q96L08 255 aa13.68□□□□□ -0.22
COL5A1-208ENST00000618395 ADAT1Q9BUB4 502 aaKnown RBP13.68□□□□□ -0.22
COL5A1-208ENST00000618395 PRLHRP49683 370 aa13.68□□□□□ -0.22
COL5A1-208ENST00000618395 OR10G8Q8NGN5 311 aa13.68□□□□□ -0.22
COL5A1-208ENST00000618395 RAB7BQ96AH8 199 aa13.68□□□□□ -0.22
COL5A1-208ENST00000618395 OR6C1Q96RD1 312 aa13.68□□□□□ -0.22
COL5A1-208ENST00000618395 C20orf27Q9GZN8 174 aa13.68□□□□□ -0.22
COL5A1-208ENST00000618395 A4GNTQ9UNA3 340 aa13.68□□□□□ -0.22
COL5A1-208ENST00000618395 SMCHD1A6NHR9 2005 aa13.68□□□□□ -0.22
COL5A1-208ENST00000618395 COCHO43405 550 aa13.68□□□□□ -0.22
COL5A1-208ENST00000618395 GLRA1P23415 457 aa13.68□□□□□ -0.22
COL5A1-208ENST00000618395 SYPL1Q16563 259 aa13.68□□□□□ -0.22
COL5A1-208ENST00000618395 EOGTQ5NDL2 527 aa13.68□□□□□ -0.22
COL5A1-208ENST00000618395 ARRDC3Q96B67 414 aa13.68□□□□□ -0.22
COL5A1-208ENST00000618395 SLC22A13Q9Y226 551 aa13.68□□□□□ -0.22
COL5A1-208ENST00000618395 MCM3APO60318 1980 aa13.68□□□□□ -0.22
COL5A1-208ENST00000618395 EN2P19622 333 aaPredicted RBP13.68□□□□□ -0.22
COL5A1-208ENST00000618395 ADPRHP54922 357 aa13.68□□□□□ -0.22
COL5A1-208ENST00000618395 CTBSQ01459 385 aa13.68□□□□□ -0.22
COL5A1-208ENST00000618395 SOX4Q06945 474 aaPredicted RBP13.68□□□□□ -0.22
COL5A1-208ENST00000618395 C2orf27AQ580R0 203 aa13.68□□□□□ -0.22
COL5A1-208ENST00000618395 OR8A1Q8NGG7 326 aa13.68□□□□□ -0.22
COL5A1-208ENST00000618395 SDCBPO00560 298 aaPredicted RBP13.68□□□□□ -0.22
COL5A1-208ENST00000618395 PGA3P0DJD8 388 aa13.68□□□□□ -0.22
COL5A1-208ENST00000618395 S100A4P26447 101 aaKnown RBP13.68□□□□□ -0.22
COL5A1-208ENST00000618395 NPBWR2P48146 333 aa13.68□□□□□ -0.22
COL5A1-208ENST00000618395 SEZ6L2Q6UXD5 910 aa13.68□□□□□ -0.22
COL5A1-208ENST00000618395 IL17FQ96PD4 163 aa13.68□□□□□ -0.22
COL5A1-208ENST00000618395 ULBP2Q9BZM5 246 aa13.68□□□□□ -0.22
COL5A1-208ENST00000618395 AAMDCQ9H7C9 122 aa13.68□□□□□ -0.22
COL5A1-208ENST00000618395 MRPS2Q9Y399 296 aaKnown RBP13.68□□□□□ -0.22
COL5A1-208ENST00000618395 ALPK2Q86TB3 2170 aa13.68□□□□□ -0.22
COL5A1-208ENST00000618395 MYADML2A6NDP7 307 aa13.68□□□□□ -0.22
COL5A1-208ENST00000618395 PI3P19957 117 aa13.68□□□□□ -0.22
COL5A1-208ENST00000618395 FKBP1BP68106 108 aa13.68□□□□□ -0.22
COL5A1-208ENST00000618395 NEURL3Q96EH8 262 aa13.68□□□□□ -0.22
COL5A1-208ENST00000618395 SLC35A4Q96G79 324 aa13.68□□□□□ -0.22
COL5A1-208ENST00000618395 ACY3Q96HD9 319 aa13.68□□□□□ -0.22
COL5A1-208ENST00000618395 ARHGAP9Q9BRR9 750 aa13.68□□□□□ -0.22
COL5A1-208ENST00000618395 TMED3Q9Y3Q3 217 aa13.68□□□□□ -0.22
COL5A1-208ENST00000618395 C4orf47A7E2U8 309 aa13.67□□□□□ -0.22
COL5A1-208ENST00000618395 MFAP5Q13361 173 aa13.67□□□□□ -0.22
COL5A1-208ENST00000618395 ZGRF1Q86YA3 2104 aa13.67□□□□□ -0.22
COL5A1-208ENST00000618395 TCTN2Q96GX1 697 aa13.67□□□□□ -0.22
COL5A1-208ENST00000618395 MOGAT1Q96PD6 335 aa13.67□□□□□ -0.22
COL5A1-208ENST00000618395 PRRX2Q99811 253 aa13.67□□□□□ -0.22
COL5A1-208ENST00000618395 METTL1Q9UBP6 276 aaKnown RBP13.67□□□□□ -0.22
COL5A1-208ENST00000618395 SLC19A1P41440 591 aa13.67□□□□□ -0.22
COL5A1-208ENST00000618395 DHRS2Q13268 280 aa13.67□□□□□ -0.22
COL5A1-208ENST00000618395 NUDT11Q96G61 164 aa13.67□□□□□ -0.22
COL5A1-208ENST00000618395 SFRP2Q96HF1 295 aa13.67□□□□□ -0.22
COL5A1-208ENST00000618395 FAM198AQ9UFP1 575 aa13.67□□□□□ -0.22
COL5A1-208ENST00000618395 MYLKQ15746 1914 aa13.67□□□□□ -0.22
COL5A1-208ENST00000618395 RIPPLY2Q5TAB7 128 aa13.67□□□□□ -0.22
COL5A1-208ENST00000618395 LYPD8Q6UX82 237 aa13.67□□□□□ -0.22
COL5A1-208ENST00000618395 OR5C1Q8NGR4 320 aa13.67□□□□□ -0.22
COL5A1-208ENST00000618395 MELTFP08582 738 aa13.67□□□□□ -0.22
COL5A1-208ENST00000618395 RNF133Q8WVZ7 376 aa13.67□□□□□ -0.22
COL5A1-208ENST00000618395 TNFRSF13CQ96RJ3 184 aa13.67□□□□□ -0.22
COL5A1-208ENST00000618395 GSN-AS1Q9NRJ2 163 aa13.67□□□□□ -0.22
COL5A1-208ENST00000618395 GKN1Q9NS71 199 aa13.67□□□□□ -0.22
COL5A1-208ENST00000618395 CYB5R3P00387 301 aaPredicted RBP13.67□□□□□ -0.22
COL5A1-208ENST00000618395 APCSP02743 223 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms