RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 MECP2P51608 486 aaKnown RBP12.29□□□□□ -0.44
CACNA1C-231ENST00000616390 CLLU1Q5K131 121 aa12.29□□□□□ -0.44
CACNA1C-231ENST00000616390 ATPAF1Q5TC12 328 aaPredicted RBP12.29□□□□□ -0.44
CACNA1C-231ENST00000616390 ZNF385CQ66K41 422 aaPredicted RBP12.29□□□□□ -0.44
CACNA1C-231ENST00000616390 Q8NFD4 153 aa12.29□□□□□ -0.44
CACNA1C-231ENST00000616390 SLC39A7Q92504 469 aa12.29□□□□□ -0.44
CACNA1C-231ENST00000616390 TMEM41AQ96HV5 264 aa12.29□□□□□ -0.44
CACNA1C-231ENST00000616390 GSN-AS1Q9NRJ2 163 aa12.29□□□□□ -0.44
CACNA1C-231ENST00000616390 UPB1Q9UBR1 384 aa12.29□□□□□ -0.44
CACNA1C-231ENST00000616390 C19orf25Q9UFG5 118 aaPredicted RBP12.29□□□□□ -0.44
CACNA1C-231ENST00000616390 PLEKHA6Q9Y2H5 1048 aa12.29□□□□□ -0.44
CACNA1C-231ENST00000616390 TRAF3IP2O43734 574 aaPredicted RBP12.29□□□□□ -0.44
CACNA1C-231ENST00000616390 EIF1BO60739 113 aaKnown RBP12.29□□□□□ -0.44
CACNA1C-231ENST00000616390 MPIG6BO95866 241 aa12.29□□□□□ -0.44
CACNA1C-231ENST00000616390 PMP2P02689 132 aa12.29□□□□□ -0.44
CACNA1C-231ENST00000616390 ITGB2P05107 769 aa12.29□□□□□ -0.44
CACNA1C-231ENST00000616390 PPP3CBP16298 524 aa12.29□□□□□ -0.44
CACNA1C-231ENST00000616390 AKR1C4P17516 323 aa12.29□□□□□ -0.44
CACNA1C-231ENST00000616390 HRH1P35367 487 aa12.29□□□□□ -0.44
CACNA1C-231ENST00000616390 EIF1P41567 113 aaKnown RBP12.29□□□□□ -0.44
CACNA1C-231ENST00000616390 RNASE10Q5GAN6 216 aaKnown RBP12.29□□□□□ -0.44
CACNA1C-231ENST00000616390 DEGS2Q6QHC5 323 aa12.29□□□□□ -0.44
CACNA1C-231ENST00000616390 MEX3BQ6ZN04 569 aaKnown RBP12.29□□□□□ -0.44
CACNA1C-231ENST00000616390 OR8B12Q8NGG6 310 aa12.29□□□□□ -0.44
CACNA1C-231ENST00000616390 CXorf58Q96LI9 332 aa12.29□□□□□ -0.44
CACNA1C-231ENST00000616390 UFSP2Q9NUQ7 469 aa12.29□□□□□ -0.44
CACNA1C-231ENST00000616390 RAB22AQ9UL26 194 aa12.29□□□□□ -0.44
CACNA1C-231ENST00000616390 F5H5K5 113 aa12.28□□□□□ -0.44
CACNA1C-231ENST00000616390 J3KRW8 73 aa12.28□□□□□ -0.44
CACNA1C-231ENST00000616390 LDLRAD4O15165 306 aa12.28□□□□□ -0.44
CACNA1C-231ENST00000616390 RP2O75695 350 aa12.28□□□□□ -0.44
CACNA1C-231ENST00000616390 OR3A4PP47883 348 aa12.28□□□□□ -0.44
CACNA1C-231ENST00000616390 GNG10P50151 68 aa12.28□□□□□ -0.44
CACNA1C-231ENST00000616390 C1orf100Q5SVJ3 147 aa12.28□□□□□ -0.44
CACNA1C-231ENST00000616390 RAET1LQ5VY80 246 aa12.28□□□□□ -0.44
CACNA1C-231ENST00000616390 GLIPR1L1Q6UWM5 242 aa12.28□□□□□ -0.44
CACNA1C-231ENST00000616390 SLC22A24Q8N4F4 322 aa12.28□□□□□ -0.44
CACNA1C-231ENST00000616390 TMEM104Q8NE00 496 aa12.28□□□□□ -0.44
CACNA1C-231ENST00000616390 OR56B2PQ8NGI1 322 aa12.28□□□□□ -0.44
CACNA1C-231ENST00000616390 OR13C8Q8NGS7 320 aa12.28□□□□□ -0.44
CACNA1C-231ENST00000616390 CCDC107Q8WV48 283 aa12.28□□□□□ -0.44
CACNA1C-231ENST00000616390 CLDN23Q96B33 292 aa12.28□□□□□ -0.44
CACNA1C-231ENST00000616390 FRYQ5TBA9 3013 aa12.28□□□□□ -0.44
CACNA1C-231ENST00000616390 ZNF878C9JN71 531 aa12.28□□□□□ -0.44
CACNA1C-231ENST00000616390 C4BPBP20851 252 aa12.28□□□□□ -0.44
CACNA1C-231ENST00000616390 MSX1P28360 303 aa12.28□□□□□ -0.44
CACNA1C-231ENST00000616390 CX3CR1P49238 355 aa12.28□□□□□ -0.44
CACNA1C-231ENST00000616390 FLI1Q01543 452 aaPredicted RBP12.28□□□□□ -0.44
CACNA1C-231ENST00000616390 DHRS2Q13268 280 aa12.28□□□□□ -0.44
CACNA1C-231ENST00000616390 ZNF260Q3ZCT1 412 aa12.28□□□□□ -0.44
CACNA1C-231ENST00000616390 CYB5R2Q6BCY4 276 aa12.28□□□□□ -0.44
CACNA1C-231ENST00000616390 RAB12Q6IQ22 244 aa12.28□□□□□ -0.44
CACNA1C-231ENST00000616390 KCTD9Q7L273 389 aa12.28□□□□□ -0.44
CACNA1C-231ENST00000616390 BEST3Q8N1M1 668 aa12.28□□□□□ -0.44
CACNA1C-231ENST00000616390 LIN37Q96GY3 246 aaPredicted RBP12.28□□□□□ -0.44
CACNA1C-231ENST00000616390 MFFQ9GZY8 342 aa12.28□□□□□ -0.44
CACNA1C-231ENST00000616390 VSIG4Q9Y279 399 aa12.28□□□□□ -0.44
CACNA1C-231ENST00000616390 E9PLN8 166 aa12.27□□□□□ -0.44
CACNA1C-231ENST00000616390 WRBO00258 174 aa12.27□□□□□ -0.44
CACNA1C-231ENST00000616390 HOXD4P09016 255 aaPredicted RBP12.27□□□□□ -0.44
CACNA1C-231ENST00000616390 ZNF735P0CB33 412 aa12.27□□□□□ -0.44
CACNA1C-231ENST00000616390 CFPP27918 469 aa12.27□□□□□ -0.44
CACNA1C-231ENST00000616390 PRSS12P56730 875 aa12.27□□□□□ -0.44
CACNA1C-231ENST00000616390 LPAL2Q16609 132 aa12.27□□□□□ -0.44
CACNA1C-231ENST00000616390 FOXRED1Q96CU9 486 aaPredicted RBP12.27□□□□□ -0.44
CACNA1C-231ENST00000616390 UCN2Q96RP3 112 aa12.27□□□□□ -0.44
CACNA1C-231ENST00000616390 PPA2Q9H2U2 334 aa12.27□□□□□ -0.44
CACNA1C-231ENST00000616390 CHCHD2Q9Y6H1 151 aaPredicted RBP12.27□□□□□ -0.44
CACNA1C-231ENST00000616390 AHCTF1Q8WYP5 2266 aa12.27□□□□□ -0.45
CACNA1C-231ENST00000616390 A0A1B0GTI1 187 aa12.27□□□□□ -0.45
CACNA1C-231ENST00000616390 TTLL8A6PVC2 850 aa12.27□□□□□ -0.45
CACNA1C-231ENST00000616390 DISC1C4P0D8 188 aa12.27□□□□□ -0.45
CACNA1C-231ENST00000616390 SULT1C2O00338 296 aa12.27□□□□□ -0.45
CACNA1C-231ENST00000616390 KCNAB3O43448 404 aa12.27□□□□□ -0.45
CACNA1C-231ENST00000616390 PMS2P2O95744 297 aa12.27□□□□□ -0.45
CACNA1C-231ENST00000616390 CCL3P10147 92 aa12.27□□□□□ -0.45
CACNA1C-231ENST00000616390 CD34P28906 385 aa12.27□□□□□ -0.45
CACNA1C-231ENST00000616390 RGS19P49795 217 aa12.27□□□□□ -0.45
CACNA1C-231ENST00000616390 GMFBP60983 142 aa12.27□□□□□ -0.45
CACNA1C-231ENST00000616390 BAMBIQ13145 260 aa12.27□□□□□ -0.45
CACNA1C-231ENST00000616390 OXGR1Q96P68 337 aa12.27□□□□□ -0.45
CACNA1C-231ENST00000616390 RBM24Q9BX46 236 aaKnown RBP12.27□□□□□ -0.45
CACNA1C-231ENST00000616390 A0A1W2PNV4 684 aa12.26□□□□□ -0.45
CACNA1C-231ENST00000616390 SOCS1O15524 211 aa12.26□□□□□ -0.45
CACNA1C-231ENST00000616390 IFNA6P05013 189 aa12.26□□□□□ -0.45
CACNA1C-231ENST00000616390 KLK3P07288 261 aaPredicted RBP12.26□□□□□ -0.45
CACNA1C-231ENST00000616390 CD46P15529 392 aa12.26□□□□□ -0.45
CACNA1C-231ENST00000616390 AVPR2P30518 371 aa12.26□□□□□ -0.45
CACNA1C-231ENST00000616390 CD96P40200 585 aa12.26□□□□□ -0.45
CACNA1C-231ENST00000616390 GUCA1AP43080 201 aaPredicted RBP12.26□□□□□ -0.45
CACNA1C-231ENST00000616390 TMEM156Q8N614 296 aa12.26□□□□□ -0.45
CACNA1C-231ENST00000616390 ZBTB8AQ96BR9 441 aa12.26□□□□□ -0.45
CACNA1C-231ENST00000616390 SLC25A21Q9BQT8 299 aaPredicted RBP12.26□□□□□ -0.45
CACNA1C-231ENST00000616390 ZNF416Q9BWM5 594 aa12.26□□□□□ -0.45
CACNA1C-231ENST00000616390 SMOC1Q9H4F8 434 aa12.26□□□□□ -0.45
CACNA1C-231ENST00000616390 MRPS28Q9Y2Q9 187 aaKnown RBP12.26□□□□□ -0.45
CACNA1C-231ENST00000616390 KCNK7Q9Y2U2 307 aa12.26□□□□□ -0.45
CACNA1C-231ENST00000616390 PRRC2CQ9Y520 2896 aaKnown RBP12.26□□□□□ -0.45
CACNA1C-231ENST00000616390 TP53I11O14683 189 aa12.26□□□□□ -0.45
CACNA1C-231ENST00000616390 F10P00742 488 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms