RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 M0R1B8 84 aa11.29□□□□□ -0.6
SHKBP1-209ENST00000595803 CLEC2LP0C7M8 214 aa11.29□□□□□ -0.6
SHKBP1-209ENST00000595803 PPP3CBP16298 524 aa11.29□□□□□ -0.6
SHKBP1-209ENST00000595803 ZNF20P17024 532 aa11.29□□□□□ -0.6
SHKBP1-209ENST00000595803 CCL1P22362 96 aa11.29□□□□□ -0.6
SHKBP1-209ENST00000595803 CFL1P23528 166 aaKnown RBP11.29□□□□□ -0.6
SHKBP1-209ENST00000595803 PCSK6P29122 969 aa11.29□□□□□ -0.6
SHKBP1-209ENST00000595803 C3orf36Q3SXR2 165 aa11.29□□□□□ -0.6
SHKBP1-209ENST00000595803 GLYATL3Q5SZD4 288 aa11.29□□□□□ -0.6
SHKBP1-209ENST00000595803 UNQ6126/PRO20091Q6UXV3 157 aa11.29□□□□□ -0.6
SHKBP1-209ENST00000595803 SERPINA12Q8IW75 414 aa11.29□□□□□ -0.6
SHKBP1-209ENST00000595803 OR14K1Q8NGZ2 314 aa11.29□□□□□ -0.6
SHKBP1-209ENST00000595803 RNASE6Q93091 150 aaKnown RBP11.29□□□□□ -0.6
SHKBP1-209ENST00000595803 TMEM106AQ96A25 262 aa11.29□□□□□ -0.6
SHKBP1-209ENST00000595803 LYZL4Q96KX0 146 aa11.29□□□□□ -0.6
SHKBP1-209ENST00000595803 TBCCD1Q9NVR7 557 aa11.29□□□□□ -0.6
SHKBP1-209ENST00000595803 CKLFQ9UBR5 152 aa11.29□□□□□ -0.6
SHKBP1-209ENST00000595803 STARD10Q9Y365 291 aa11.29□□□□□ -0.6
SHKBP1-209ENST00000595803 MYO7BQ6PIF6 2116 aa11.29□□□□□ -0.6
SHKBP1-209ENST00000595803 IGHV1-18A0A0C4DH31 117 aa11.28□□□□□ -0.6
SHKBP1-209ENST00000595803 ANKRD61A6NGH8 418 aa11.28□□□□□ -0.6
SHKBP1-209ENST00000595803 NGFP01138 241 aa11.28□□□□□ -0.6
SHKBP1-209ENST00000595803 IGLV1-44P01699 117 aa11.28□□□□□ -0.6
SHKBP1-209ENST00000595803 IGLV3-1P01715 115 aa11.28□□□□□ -0.6
SHKBP1-209ENST00000595803 CECR9P0C854 216 aa11.28□□□□□ -0.6
SHKBP1-209ENST00000595803 COX6B1P14854 86 aa11.28□□□□□ -0.6
SHKBP1-209ENST00000595803 RAB3BP20337 219 aa11.28□□□□□ -0.6
SHKBP1-209ENST00000595803 GNALP38405 381 aa11.28□□□□□ -0.6
SHKBP1-209ENST00000595803 MAP2K3P46734 347 aa11.28□□□□□ -0.6
SHKBP1-209ENST00000595803 FBXL19-AS1Q494R0 122 aa11.28□□□□□ -0.6
SHKBP1-209ENST00000595803 PAQR4Q8N4S7 273 aaPredicted RBP11.28□□□□□ -0.6
SHKBP1-209ENST00000595803 PLPP7Q8NBV4 271 aa11.28□□□□□ -0.6
SHKBP1-209ENST00000595803 SEMA6DQ8NFY4 1073 aa11.28□□□□□ -0.6
SHKBP1-209ENST00000595803 OR5D14Q8NGL3 314 aa11.28□□□□□ -0.6
SHKBP1-209ENST00000595803 OR2AE1Q8NHA4 323 aa11.28□□□□□ -0.6
SHKBP1-209ENST00000595803 ORAI1Q96D31 301 aa11.28□□□□□ -0.6
SHKBP1-209ENST00000595803 SOX7Q9BT81 388 aa11.28□□□□□ -0.6
SHKBP1-209ENST00000595803 PTTG3PQ9NZH4 202 aa11.28□□□□□ -0.6
SHKBP1-209ENST00000595803 FOXJ3Q9UPW0 622 aa11.28□□□□□ -0.6
SHKBP1-209ENST00000595803 KLF2Q9Y5W3 355 aaPredicted RBP11.28□□□□□ -0.6
SHKBP1-209ENST00000595803 V9GYS6 101 aa11.28□□□□□ -0.6
SHKBP1-209ENST00000595803 LOC390937A0A1W2PQ73 354 aa11.27□□□□□ -0.61
SHKBP1-209ENST00000595803 SHISA3A0PJX4 238 aa11.27□□□□□ -0.61
SHKBP1-209ENST00000595803 NKX2-6A6NCS4 301 aa11.27□□□□□ -0.61
SHKBP1-209ENST00000595803 J3QW42 95 aa11.27□□□□□ -0.61
SHKBP1-209ENST00000595803 LMX1BO60663 402 aa11.27□□□□□ -0.61
SHKBP1-209ENST00000595803 DHRS3O75911 302 aa11.27□□□□□ -0.61
SHKBP1-209ENST00000595803 ZNF35P13682 527 aa11.27□□□□□ -0.61
SHKBP1-209ENST00000595803 ANOS1P23352 680 aa11.27□□□□□ -0.61
SHKBP1-209ENST00000595803 WNT5AP41221 380 aa11.27□□□□□ -0.61
SHKBP1-209ENST00000595803 RAD52P43351 418 aa11.27□□□□□ -0.61
SHKBP1-209ENST00000595803 PSMD7P51665 324 aa11.27□□□□□ -0.61
SHKBP1-209ENST00000595803 UCP2P55851 309 aa11.27□□□□□ -0.61
SHKBP1-209ENST00000595803 KRTAP10-9P60411 292 aa11.27□□□□□ -0.61
SHKBP1-209ENST00000595803 ZNF92Q03936 586 aa11.27□□□□□ -0.61
SHKBP1-209ENST00000595803 RIPPLY1Q0D2K3 151 aa11.27□□□□□ -0.61
SHKBP1-209ENST00000595803 XKRXQ6PP77 449 aa11.27□□□□□ -0.61
SHKBP1-209ENST00000595803 Q6ZSR3 168 aa11.27□□□□□ -0.61
SHKBP1-209ENST00000595803 PGAP1Q75T13 922 aa11.27□□□□□ -0.61
SHKBP1-209ENST00000595803 MRPL21Q7Z2W9 205 aaKnown RBP11.27□□□□□ -0.61
SHKBP1-209ENST00000595803 MYPOPQ86VE0 399 aaPredicted RBP11.27□□□□□ -0.61
SHKBP1-209ENST00000595803 WFDC8Q8IUA0 241 aa11.27□□□□□ -0.61
SHKBP1-209ENST00000595803 CROCCP3Q8IVE0 287 aa11.27□□□□□ -0.61
SHKBP1-209ENST00000595803 PARP16Q8N5Y8 322 aa11.27□□□□□ -0.61
SHKBP1-209ENST00000595803 ITFG2Q969R8 447 aa11.27□□□□□ -0.61
SHKBP1-209ENST00000595803 SPSB4Q96A44 273 aa11.27□□□□□ -0.61
SHKBP1-209ENST00000595803 SLC25A46Q96AG3 418 aa11.27□□□□□ -0.61
SHKBP1-209ENST00000595803 C10orf35Q96D05 121 aa11.27□□□□□ -0.61
SHKBP1-209ENST00000595803 ZC3HAV1LQ96H79 300 aaKnown RBP11.27□□□□□ -0.61
SHKBP1-209ENST00000595803 OR51B6Q9H340 312 aa11.27□□□□□ -0.61
SHKBP1-209ENST00000595803 PLEKHA1Q9HB21 404 aa11.27□□□□□ -0.61
SHKBP1-209ENST00000595803 TAS2R4Q9NYW5 299 aa11.27□□□□□ -0.61
SHKBP1-209ENST00000595803 CCDC59Q9P031 241 aaKnown RBP11.27□□□□□ -0.61
SHKBP1-209ENST00000595803 NDRG3Q9UGV2 375 aa11.27□□□□□ -0.61
SHKBP1-209ENST00000595803 PIGLQ9Y2B2 252 aa11.27□□□□□ -0.61
SHKBP1-209ENST00000595803 AK6Q9Y3D8 172 aaKnown RBP11.27□□□□□ -0.61
SHKBP1-209ENST00000595803 SPEF1Q9Y4P9 236 aa11.27□□□□□ -0.61
SHKBP1-209ENST00000595803 ZNF469Q96JG9 3925 aaPredicted RBP11.26□□□□□ -0.61
SHKBP1-209ENST00000595803 SMIM30A4D0T7 59 aa11.26□□□□□ -0.61
SHKBP1-209ENST00000595803 MEGF11A6BM72 1044 aa11.26□□□□□ -0.61
SHKBP1-209ENST00000595803 GGT3PA6NGU5 568 aa11.26□□□□□ -0.61
SHKBP1-209ENST00000595803 A6NIN4 97 aa11.26□□□□□ -0.61
SHKBP1-209ENST00000595803 CRYAAP02489 173 aa11.26□□□□□ -0.61
SHKBP1-209ENST00000595803 MAS1P04201 325 aa11.26□□□□□ -0.61
SHKBP1-209ENST00000595803 FAM157BP0CG42 384 aa11.26□□□□□ -0.61
SHKBP1-209ENST00000595803 TUBG1P23258 451 aa11.26□□□□□ -0.61
SHKBP1-209ENST00000595803 THBS4P35443 961 aa11.26□□□□□ -0.61
SHKBP1-209ENST00000595803 DDOSTP39656 456 aa11.26□□□□□ -0.61
SHKBP1-209ENST00000595803 GSK3AP49840 483 aa11.26□□□□□ -0.61
SHKBP1-209ENST00000595803 CAV3P56539 151 aa11.26□□□□□ -0.61
SHKBP1-209ENST00000595803 PPP1CBP62140 327 aa11.26□□□□□ -0.61
SHKBP1-209ENST00000595803 PPP3R1P63098 170 aa11.26□□□□□ -0.61
SHKBP1-209ENST00000595803 FAM3AP98173 230 aa11.26□□□□□ -0.61
SHKBP1-209ENST00000595803 NAAAQ02083 359 aa11.26□□□□□ -0.61
SHKBP1-209ENST00000595803 HNRNPA0Q13151 305 aaKnown RBP11.26□□□□□ -0.61
SHKBP1-209ENST00000595803 C1orf174Q8IYL3 243 aa11.26□□□□□ -0.61
SHKBP1-209ENST00000595803 ZNF295-AS1Q8N0V1 137 aa11.26□□□□□ -0.61
SHKBP1-209ENST00000595803 OR1J1Q8NGS3 322 aa11.26□□□□□ -0.61
SHKBP1-209ENST00000595803 MCFD2Q8NI22 146 aa11.26□□□□□ -0.61
SHKBP1-209ENST00000595803 ADAT3Q96EY9 351 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms