RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 APOBEC3AP31941 199 aaPredicted RBP11.05□□□□□ -0.64
SCAF1-202ENST00000595242 EVX1P49640 407 aa11.05□□□□□ -0.64
SCAF1-202ENST00000595242 CAV3P56539 151 aa11.05□□□□□ -0.64
SCAF1-202ENST00000595242 H3F3AP84243 136 aa11.05□□□□□ -0.64
SCAF1-202ENST00000595242 SLC17A1Q14916 467 aa11.05□□□□□ -0.64
SCAF1-202ENST00000595242 FAM27D1Q5T7N8 215 aa11.05□□□□□ -0.64
SCAF1-202ENST00000595242 SFXN4Q6P4A7 337 aa11.05□□□□□ -0.64
SCAF1-202ENST00000595242 KCTD18Q6PI47 426 aaPredicted RBP11.05□□□□□ -0.64
SCAF1-202ENST00000595242 SHISA2Q6UWI4 295 aa11.05□□□□□ -0.64
SCAF1-202ENST00000595242 WDFY1Q8IWB7 410 aa11.05□□□□□ -0.64
SCAF1-202ENST00000595242 UEVLDQ8IX04 471 aa11.05□□□□□ -0.64
SCAF1-202ENST00000595242 ZNF679Q8IYX0 411 aa11.05□□□□□ -0.64
SCAF1-202ENST00000595242 YIPF7Q8N8F6 280 aa11.05□□□□□ -0.64
SCAF1-202ENST00000595242 OR6X1Q8NH79 312 aa11.05□□□□□ -0.64
SCAF1-202ENST00000595242 OR5B2Q96R09 309 aa11.05□□□□□ -0.64
SCAF1-202ENST00000595242 AMELYQ99218 206 aa11.05□□□□□ -0.64
SCAF1-202ENST00000595242 ZNF747Q9BV97 191 aa11.05□□□□□ -0.64
SCAF1-202ENST00000595242 GP6Q9HCN6 339 aa11.05□□□□□ -0.64
SCAF1-202ENST00000595242 MYOZ1Q9NP98 299 aaPredicted RBP11.05□□□□□ -0.64
SCAF1-202ENST00000595242 ABCB10Q9NRK6 738 aa11.05□□□□□ -0.64
SCAF1-202ENST00000595242 KCNG2Q9UJ96 466 aa11.05□□□□□ -0.64
SCAF1-202ENST00000595242 PCDHB10Q9UN67 800 aa11.05□□□□□ -0.64
SCAF1-202ENST00000595242 RASD1Q9Y272 281 aa11.05□□□□□ -0.64
SCAF1-202ENST00000595242 COA3Q9Y2R0 106 aaPredicted RBP11.05□□□□□ -0.64
SCAF1-202ENST00000595242 WNK2Q9Y3S1 2297 aa11.05□□□□□ -0.64
SCAF1-202ENST00000595242 A0A1W2PNR3 127 aa11.04□□□□□ -0.64
SCAF1-202ENST00000595242 SMIM30A4D0T7 59 aa11.04□□□□□ -0.64
SCAF1-202ENST00000595242 TMEM212A6NML5 194 aa11.04□□□□□ -0.64
SCAF1-202ENST00000595242 NOTOA8MTQ0 251 aa11.04□□□□□ -0.64
SCAF1-202ENST00000595242 ZNF593O00488 134 aaPredicted RBP11.04□□□□□ -0.64
SCAF1-202ENST00000595242 MAGEB3O15480 346 aa11.04□□□□□ -0.64
SCAF1-202ENST00000595242 EIF1BO60739 113 aaKnown RBP11.04□□□□□ -0.64
SCAF1-202ENST00000595242 NCR1O76036 304 aa11.04□□□□□ -0.64
SCAF1-202ENST00000595242 VAMP5O95183 116 aa11.04□□□□□ -0.64
SCAF1-202ENST00000595242 GPANK1O95872 356 aa11.04□□□□□ -0.64
SCAF1-202ENST00000595242 HLA-DQB1P01920 261 aa11.04□□□□□ -0.64
SCAF1-202ENST00000595242 PGA4P0DJD7 388 aa11.04□□□□□ -0.64
SCAF1-202ENST00000595242 PGA3P0DJD8 388 aa11.04□□□□□ -0.64
SCAF1-202ENST00000595242 IGHV1-2P23083 117 aa11.04□□□□□ -0.64
SCAF1-202ENST00000595242 MAPK3P27361 379 aaPredicted RBP11.04□□□□□ -0.64
SCAF1-202ENST00000595242 ZNF133P52736 654 aaPredicted RBP11.04□□□□□ -0.64
SCAF1-202ENST00000595242 BIDP55957 195 aa11.04□□□□□ -0.64
SCAF1-202ENST00000595242 OR2B6P58173 313 aa11.04□□□□□ -0.64
SCAF1-202ENST00000595242 DEFA1P59665 94 aa11.04□□□□□ -0.64
SCAF1-202ENST00000595242 DEFA3P59666 94 aa11.04□□□□□ -0.64
SCAF1-202ENST00000595242 HILS1P60008 231 aa11.04□□□□□ -0.64
SCAF1-202ENST00000595242 RASGEF1BQ0VAM2 473 aa11.04□□□□□ -0.64
SCAF1-202ENST00000595242 HIST3H3Q16695 136 aa11.04□□□□□ -0.64
SCAF1-202ENST00000595242 Q499Y3 187 aa11.04□□□□□ -0.64
SCAF1-202ENST00000595242 HSD17B12Q53GQ0 312 aa11.04□□□□□ -0.64
SCAF1-202ENST00000595242 CEP78Q5JTW2 689 aa11.04□□□□□ -0.64
SCAF1-202ENST00000595242 THEM4Q5T1C6 240 aa11.04□□□□□ -0.64
SCAF1-202ENST00000595242 DEGS2Q6QHC5 323 aa11.04□□□□□ -0.64
SCAF1-202ENST00000595242 KDM8Q8N371 416 aa11.04□□□□□ -0.64
SCAF1-202ENST00000595242 OR2G2Q8NGZ5 317 aa11.04□□□□□ -0.64
SCAF1-202ENST00000595242 OR52N5Q8NH56 324 aa11.04□□□□□ -0.64
SCAF1-202ENST00000595242 OR5AK2Q8NH90 309 aa11.04□□□□□ -0.64
SCAF1-202ENST00000595242 HPS1Q92902 700 aa11.04□□□□□ -0.64
SCAF1-202ENST00000595242 CPNE4Q96A23 557 aaPredicted RBP11.04□□□□□ -0.64
SCAF1-202ENST00000595242 SLC25A44Q96H78 314 aaPredicted RBP11.04□□□□□ -0.64
SCAF1-202ENST00000595242 DIRAS2Q96HU8 199 aa11.04□□□□□ -0.64
SCAF1-202ENST00000595242 TXNDC15Q96J42 360 aa11.04□□□□□ -0.64
SCAF1-202ENST00000595242 C4orf45Q96LM5 186 aa11.04□□□□□ -0.64
SCAF1-202ENST00000595242 DERL3Q96Q80 235 aa11.04□□□□□ -0.64
SCAF1-202ENST00000595242 OR14A2Q96R54 314 aa11.04□□□□□ -0.64
SCAF1-202ENST00000595242 PDCD1LG2Q9BQ51 273 aa11.04□□□□□ -0.64
SCAF1-202ENST00000595242 SRXN1Q9BYN0 137 aa11.04□□□□□ -0.64
SCAF1-202ENST00000595242 PPP1R3EQ9H7J1 279 aa11.04□□□□□ -0.64
SCAF1-202ENST00000595242 TIGARQ9NQ88 270 aa11.04□□□□□ -0.64
SCAF1-202ENST00000595242 MED29Q9NX70 200 aa11.04□□□□□ -0.64
SCAF1-202ENST00000595242 SLCO1C1Q9NYB5 712 aa11.04□□□□□ -0.64
SCAF1-202ENST00000595242 FRRS1LQ9P0K9 344 aa11.04□□□□□ -0.64
SCAF1-202ENST00000595242 ATP23Q9Y6H3 246 aa11.04□□□□□ -0.64
SCAF1-202ENST00000595242 TRBV5-7A0A0A0MS05 114 aa11.03□□□□□ -0.64
SCAF1-202ENST00000595242 FABP12A6NFH5 140 aa11.03□□□□□ -0.64
SCAF1-202ENST00000595242 GJE1A6NN92 205 aa11.03□□□□□ -0.64
SCAF1-202ENST00000595242 M0R1B8 84 aa11.03□□□□□ -0.64
SCAF1-202ENST00000595242 SULT2B1O00204 365 aa11.03□□□□□ -0.64
SCAF1-202ENST00000595242 PDCD5O14737 125 aa11.03□□□□□ -0.64
SCAF1-202ENST00000595242 PIN1P1O15428 100 aa11.03□□□□□ -0.64
SCAF1-202ENST00000595242 SRSF10O75494 262 aaKnown RBP11.03□□□□□ -0.64
SCAF1-202ENST00000595242 IGHG1P01857 330 aa11.03□□□□□ -0.64
SCAF1-202ENST00000595242 NR2C1P13056 603 aa11.03□□□□□ -0.64
SCAF1-202ENST00000595242 IL7P13232 177 aa11.03□□□□□ -0.64
SCAF1-202ENST00000595242 COX5AP20674 150 aa11.03□□□□□ -0.64
SCAF1-202ENST00000595242 SFTPDP35247 375 aa11.03□□□□□ -0.64
SCAF1-202ENST00000595242 KIR3DL2P43630 455 aa11.03□□□□□ -0.64
SCAF1-202ENST00000595242 OR3A2P47893 321 aa11.03□□□□□ -0.64
SCAF1-202ENST00000595242 DVL1P1P54792 670 aaPredicted RBP11.03□□□□□ -0.64
SCAF1-202ENST00000595242 FMODQ06828 376 aa11.03□□□□□ -0.64
SCAF1-202ENST00000595242 SCGB2A2Q13296 93 aa11.03□□□□□ -0.64
SCAF1-202ENST00000595242 KCNMB1Q16558 191 aa11.03□□□□□ -0.64
SCAF1-202ENST00000595242 MEP1BQ16820 701 aa11.03□□□□□ -0.64
SCAF1-202ENST00000595242 SWI5Q1ZZU3 235 aa11.03□□□□□ -0.64
SCAF1-202ENST00000595242 MST1LQ2TV78 715 aa11.03□□□□□ -0.64
SCAF1-202ENST00000595242 TMEM176BQ3YBM2 270 aaPredicted RBP11.03□□□□□ -0.64
SCAF1-202ENST00000595242 CNIH2Q6PI25 160 aa11.03□□□□□ -0.64
SCAF1-202ENST00000595242 SLC25A47Q6Q0C1 308 aa11.03□□□□□ -0.64
SCAF1-202ENST00000595242 FAM131AQ6UXB0 335 aa11.03□□□□□ -0.64
SCAF1-202ENST00000595242 FCRLAQ7L513 359 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms