RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 OR10H3O60404 316 aa6.59□□□□□ -1.35
SMAD4-209ENST00000589941 SOX14O95416 240 aa6.59□□□□□ -1.35
SMAD4-209ENST00000589941 MSMBP08118 114 aa6.59□□□□□ -1.35
SMAD4-209ENST00000589941 TSPAN19P0C672 248 aa6.59□□□□□ -1.35
SMAD4-209ENST00000589941 MYL12AP19105 171 aa6.59□□□□□ -1.35
SMAD4-209ENST00000589941 S1PR1P21453 382 aa6.59□□□□□ -1.35
SMAD4-209ENST00000589941 AZGP1P25311 298 aaKnown RBP6.59□□□□□ -1.35
SMAD4-209ENST00000589941 POU1F1P28069 291 aa6.59□□□□□ -1.35
SMAD4-209ENST00000589941 SOAT1P35610 550 aa6.59□□□□□ -1.35
SMAD4-209ENST00000589941 FEN1P39748 380 aaKnown RBP6.59□□□□□ -1.35
SMAD4-209ENST00000589941 SSR2P43308 183 aa6.59□□□□□ -1.35
SMAD4-209ENST00000589941 TGM4P49221 684 aa6.59□□□□□ -1.35
SMAD4-209ENST00000589941 DSCR4P56555 118 aaPredicted RBP6.59□□□□□ -1.35
SMAD4-209ENST00000589941 TIRAPP58753 221 aa6.59□□□□□ -1.35
SMAD4-209ENST00000589941 RRAS2P62070 204 aaPredicted RBP6.59□□□□□ -1.35
SMAD4-209ENST00000589941 HOXC5Q00444 222 aa6.59□□□□□ -1.35
SMAD4-209ENST00000589941 PSG6Q00889 435 aa6.59□□□□□ -1.35
SMAD4-209ENST00000589941 FABP5Q01469 135 aa6.59□□□□□ -1.35
SMAD4-209ENST00000589941 TSPAN31Q12999 210 aa6.59□□□□□ -1.35
SMAD4-209ENST00000589941 FAM189A2Q15884 450 aa6.59□□□□□ -1.35
SMAD4-209ENST00000589941 TATDN3Q17R31 274 aa6.59□□□□□ -1.35
SMAD4-209ENST00000589941 PDZK1Q5T2W1 519 aa6.59□□□□□ -1.35
SMAD4-209ENST00000589941 SIGIRRQ6IA17 410 aa6.59□□□□□ -1.35
SMAD4-209ENST00000589941 LAMTOR1Q6IAA8 161 aa6.59□□□□□ -1.35
SMAD4-209ENST00000589941 C22orf42Q6IC83 251 aa6.59□□□□□ -1.35
SMAD4-209ENST00000589941 FAHD2BQ6P2I3 314 aaPredicted RBP6.59□□□□□ -1.35
SMAD4-209ENST00000589941 CNIH2Q6PI25 160 aa6.59□□□□□ -1.35
SMAD4-209ENST00000589941 PLET1Q6UQ28 207 aa6.59□□□□□ -1.35
SMAD4-209ENST00000589941 TMEM107Q6UX40 140 aa6.59□□□□□ -1.35
SMAD4-209ENST00000589941 TUSC5Q8IXB3 177 aa6.59□□□□□ -1.35
SMAD4-209ENST00000589941 ZCCHC24Q8N2G6 241 aaKnown RBP6.59□□□□□ -1.35
SMAD4-209ENST00000589941 YIPF7Q8N8F6 280 aa6.59□□□□□ -1.35
SMAD4-209ENST00000589941 OR4M1Q8NGD0 313 aa6.59□□□□□ -1.35
SMAD4-209ENST00000589941 OR52P1PQ8NH57 321 aa6.59□□□□□ -1.35
SMAD4-209ENST00000589941 GNPDA2Q8TDQ7 276 aa6.59□□□□□ -1.35
SMAD4-209ENST00000589941 CREB3L1Q96BA8 519 aa6.59□□□□□ -1.35
SMAD4-209ENST00000589941 FAHD2AQ96GK7 314 aa6.59□□□□□ -1.35
SMAD4-209ENST00000589941 DIRAS2Q96HU8 199 aa6.59□□□□□ -1.35
SMAD4-209ENST00000589941 LRR1Q96L50 414 aa6.59□□□□□ -1.35
SMAD4-209ENST00000589941 ZNF48Q96MX3 618 aaPredicted RBP6.59□□□□□ -1.35
SMAD4-209ENST00000589941 FYTTD1Q96QD9 318 aaKnown RBP6.59□□□□□ -1.35
SMAD4-209ENST00000589941 GPA33Q99795 319 aa6.59□□□□□ -1.35
SMAD4-209ENST00000589941 WFDC6Q9BQY6 131 aa6.59□□□□□ -1.35
SMAD4-209ENST00000589941 C1QTNF6Q9BXI9 259 aa6.59□□□□□ -1.35
SMAD4-209ENST00000589941 HDHD5Q9BXW7 423 aa6.59□□□□□ -1.35
SMAD4-209ENST00000589941 PRRG3Q9BZD7 231 aa6.59□□□□□ -1.35
SMAD4-209ENST00000589941 TMEM185BQ9H7F4 350 aa6.59□□□□□ -1.35
SMAD4-209ENST00000589941 DDX31Q9H8H2 851 aaKnown RBP6.59□□□□□ -1.35
SMAD4-209ENST00000589941 MYOZ1Q9NP98 299 aaPredicted RBP6.59□□□□□ -1.35
SMAD4-209ENST00000589941 FANCFQ9NPI8 374 aa6.59□□□□□ -1.35
SMAD4-209ENST00000589941 B3GAT2Q9NPZ5 323 aa6.59□□□□□ -1.35
SMAD4-209ENST00000589941 MIEF1Q9NQG6 463 aa6.59□□□□□ -1.35
SMAD4-209ENST00000589941 G6PC2Q9NQR9 355 aa6.59□□□□□ -1.35
SMAD4-209ENST00000589941 B3GNT2Q9NY97 397 aa6.59□□□□□ -1.35
SMAD4-209ENST00000589941 MED11Q9P086 117 aa6.59□□□□□ -1.35
SMAD4-209ENST00000589941 RHCGQ9UBD6 479 aa6.59□□□□□ -1.35
SMAD4-209ENST00000589941 SLC9A8Q9Y2E8 581 aa6.59□□□□□ -1.35
SMAD4-209ENST00000589941 SPIN1Q9Y657 262 aaPredicted RBP6.59□□□□□ -1.35
SMAD4-209ENST00000589941 ALG5Q9Y673 324 aa6.59□□□□□ -1.35
SMAD4-209ENST00000589941 CDH10Q9Y6N8 788 aa6.59□□□□□ -1.35
SMAD4-209ENST00000589941 A0A0A6YYD5 115 aa6.58□□□□□ -1.36
SMAD4-209ENST00000589941 A0A0G2JPF8 293 aa6.58□□□□□ -1.36
SMAD4-209ENST00000589941 LINC00862A6NCI5 91 aa6.58□□□□□ -1.36
SMAD4-209ENST00000589941 AQP7P3A6NL99 342 aa6.58□□□□□ -1.36
SMAD4-209ENST00000589941 HNRNPCL2B2RXH8 293 aa6.58□□□□□ -1.36
SMAD4-209ENST00000589941 HNRNPCL3B7ZW38 293 aa6.58□□□□□ -1.36
SMAD4-209ENST00000589941 ORC5O43913 435 aa6.58□□□□□ -1.36
SMAD4-209ENST00000589941 JTBO76095 146 aa6.58□□□□□ -1.36
SMAD4-209ENST00000589941 GPR75O95800 540 aa6.58□□□□□ -1.36
SMAD4-209ENST00000589941 HLA-DPB1P04440 258 aa6.58□□□□□ -1.36
SMAD4-209ENST00000589941 HNRNPCL4P0DMR1 293 aa6.58□□□□□ -1.36
SMAD4-209ENST00000589941 OR12D1P0DN82 309 aa6.58□□□□□ -1.36
SMAD4-209ENST00000589941 DAOP14920 347 aa6.58□□□□□ -1.36
SMAD4-209ENST00000589941 ZNF17P17021 662 aa6.58□□□□□ -1.36
SMAD4-209ENST00000589941 COX5AP20674 150 aa6.58□□□□□ -1.36
SMAD4-209ENST00000589941 IGHV1-2P23083 117 aa6.58□□□□□ -1.36
SMAD4-209ENST00000589941 PRTN3P24158 256 aa6.58□□□□□ -1.36
SMAD4-209ENST00000589941 SHC1P29353 583 aa6.58□□□□□ -1.36
SMAD4-209ENST00000589941 SLC6A1P30531 599 aa6.58□□□□□ -1.36
SMAD4-209ENST00000589941 SLC1A3P43003 542 aa6.58□□□□□ -1.36
SMAD4-209ENST00000589941 OMPP47874 163 aa6.58□□□□□ -1.36
SMAD4-209ENST00000589941 MTNR1AP48039 350 aa6.58□□□□□ -1.36
SMAD4-209ENST00000589941 KHKP50053 298 aa6.58□□□□□ -1.36
SMAD4-209ENST00000589941 MAPK12P53778 367 aa6.58□□□□□ -1.36
SMAD4-209ENST00000589941 RAG2P55895 527 aa6.58□□□□□ -1.36
SMAD4-209ENST00000589941 FUT5Q11128 374 aa6.58□□□□□ -1.36
SMAD4-209ENST00000589941 MAB21L1Q13394 359 aa6.58□□□□□ -1.36
SMAD4-209ENST00000589941 DECR1Q16698 335 aa6.58□□□□□ -1.36
SMAD4-209ENST00000589941 CCDC58Q4VC31 144 aa6.58□□□□□ -1.36
SMAD4-209ENST00000589941 PYDC2Q56P42 97 aa6.58□□□□□ -1.36
SMAD4-209ENST00000589941 RNASE12Q5GAN4 147 aaKnown RBP6.58□□□□□ -1.36
SMAD4-209ENST00000589941 SLC27A4Q6P1M0 643 aa6.58□□□□□ -1.36
SMAD4-209ENST00000589941 MZT2AQ6P582 158 aa6.58□□□□□ -1.36
SMAD4-209ENST00000589941 TNFAIP8L2Q6P589 184 aaPredicted RBP6.58□□□□□ -1.36
SMAD4-209ENST00000589941 RBM45Q8IUH3 476 aaKnown RBP6.58□□□□□ -1.36
SMAD4-209ENST00000589941 SYT14Q8NB59 555 aa6.58□□□□□ -1.36
SMAD4-209ENST00000589941 C17orf47Q8NEP4 570 aa6.58□□□□□ -1.36
SMAD4-209ENST00000589941 ATP6V1C2Q8NEY4 427 aa6.58□□□□□ -1.36
SMAD4-209ENST00000589941 OR8D4Q8NGM9 314 aa6.58□□□□□ -1.36
SMAD4-209ENST00000589941 FAM110DQ8TAY7 271 aaPredicted RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms