RNA–Protein interactions for RNA: ENST00000589104.5

KDM4B-208, Transcript of lysine demethylase 4B, humanhuman

TSL 2

Gene KDM4B, Length 3,470 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-208ENST00000589104 ATXN7L3Q14CW9 347 aaPredicted RBP11.84□□□□□ -0.51
KDM4B-208ENST00000589104 SURF2Q15527 256 aaPredicted RBP11.84□□□□□ -0.51
KDM4B-208ENST00000589104 RSPO1Q2MKA7 263 aaPredicted RBP11.84□□□□□ -0.51
KDM4B-208ENST00000589104 GVQW1Q8N7I0 195 aa11.84□□□□□ -0.51
KDM4B-208ENST00000589104 GATSQ8NAP1 163 aa11.84□□□□□ -0.51
KDM4B-208ENST00000589104 OR2I1PQ8NGU4 316 aa11.84□□□□□ -0.51
KDM4B-208ENST00000589104 DUSP15Q9H1R2 295 aaPredicted RBP11.84□□□□□ -0.51
KDM4B-208ENST00000589104 RAD1O60671 282 aa11.84□□□□□ -0.51
KDM4B-208ENST00000589104 HLA-AP01891 365 aaKnown RBP11.84□□□□□ -0.51
KDM4B-208ENST00000589104 AMY2AP04746 511 aa11.84□□□□□ -0.51
KDM4B-208ENST00000589104 ZNF761Q86XN6 746 aaPredicted RBP11.84□□□□□ -0.51
KDM4B-208ENST00000589104 SLC22A24Q8N4F4 322 aa11.84□□□□□ -0.51
KDM4B-208ENST00000589104 ELP5Q8TE02 316 aa11.84□□□□□ -0.51
KDM4B-208ENST00000589104 CDC6Q99741 560 aa11.84□□□□□ -0.51
KDM4B-208ENST00000589104 EMC9Q9Y3B6 208 aa11.84□□□□□ -0.51
KDM4B-208ENST00000589104 S100A8P05109 93 aa11.84□□□□□ -0.51
KDM4B-208ENST00000589104 ZNF28P17035 718 aa11.84□□□□□ -0.51
KDM4B-208ENST00000589104 FPR2P25090 351 aa11.84□□□□□ -0.51
KDM4B-208ENST00000589104 NPBWR1P48145 328 aa11.84□□□□□ -0.51
KDM4B-208ENST00000589104 GFERP55789 205 aa11.84□□□□□ -0.51
KDM4B-208ENST00000589104 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.84□□□□□ -0.51
KDM4B-208ENST00000589104 FADS6Q8N9I5 356 aa11.84□□□□□ -0.51
KDM4B-208ENST00000589104 BHLHE23Q8NDY6 225 aa11.84□□□□□ -0.51
KDM4B-208ENST00000589104 S100PBPQ96BU1 408 aa11.84□□□□□ -0.51
KDM4B-208ENST00000589104 LURAP1Q96LR2 239 aa11.84□□□□□ -0.51
KDM4B-208ENST00000589104 ADOQ96SZ5 270 aa11.84□□□□□ -0.51
KDM4B-208ENST00000589104 GAL3ST1Q99999 423 aa11.84□□□□□ -0.51
KDM4B-208ENST00000589104 FOXQ1Q9C009 403 aa11.84□□□□□ -0.51
KDM4B-208ENST00000589104 TREM1Q9NP99 234 aa11.84□□□□□ -0.51
KDM4B-208ENST00000589104 COLCA2A8K830 154 aa11.83□□□□□ -0.52
KDM4B-208ENST00000589104 PSMB6P28072 239 aa11.83□□□□□ -0.52
KDM4B-208ENST00000589104 APOBEC1P41238 236 aaKnown RBP11.83□□□□□ -0.52
KDM4B-208ENST00000589104 CHAF1BQ13112 559 aa11.83□□□□□ -0.52
KDM4B-208ENST00000589104 TGIF1Q15583 401 aa11.83□□□□□ -0.52
KDM4B-208ENST00000589104 TMEM128Q5BJH2 165 aa11.83□□□□□ -0.52
KDM4B-208ENST00000589104 LYZL4Q96KX0 146 aa11.83□□□□□ -0.52
KDM4B-208ENST00000589104 NKX3-1Q99801 234 aaPredicted RBP11.83□□□□□ -0.52
KDM4B-208ENST00000589104 IKZF2Q9UKS7 526 aa11.83□□□□□ -0.52
KDM4B-208ENST00000589104 PCDHGA1Q9Y5H4 931 aa11.83□□□□□ -0.52
KDM4B-208ENST00000589104 A0A1B0GW55 424 aa11.83□□□□□ -0.52
KDM4B-208ENST00000589104 A0A1W2PPE3 182 aa11.83□□□□□ -0.52
KDM4B-208ENST00000589104 TCRBV21S2A2A0A5A6 115 aa11.83□□□□□ -0.52
KDM4B-208ENST00000589104 MSGN1A6NI15 193 aa11.83□□□□□ -0.52
KDM4B-208ENST00000589104 OR2T1O43869 369 aa11.83□□□□□ -0.52
KDM4B-208ENST00000589104 CDC14BO60729 498 aa11.83□□□□□ -0.52
KDM4B-208ENST00000589104 DUX4L2P0CJ85 424 aa11.83□□□□□ -0.52
KDM4B-208ENST00000589104 DUX4L3P0CJ86 424 aa11.83□□□□□ -0.52
KDM4B-208ENST00000589104 DUX4L4P0CJ87 422 aa11.83□□□□□ -0.52
KDM4B-208ENST00000589104 DUX4L5P0CJ88 424 aa11.83□□□□□ -0.52
KDM4B-208ENST00000589104 DUX4L6P0CJ89 424 aa11.83□□□□□ -0.52
KDM4B-208ENST00000589104 DUX4L7P0CJ90 424 aa11.83□□□□□ -0.52
KDM4B-208ENST00000589104 THEGLP0DJG4 465 aa11.83□□□□□ -0.52
KDM4B-208ENST00000589104 TAS2R31P59538 309 aa11.83□□□□□ -0.52
KDM4B-208ENST00000589104 H3F3AP84243 136 aa11.83□□□□□ -0.52
KDM4B-208ENST00000589104 USF2Q15853 346 aaPredicted RBP11.83□□□□□ -0.52
KDM4B-208ENST00000589104 ANKRD55Q3KP44 614 aa11.83□□□□□ -0.52
KDM4B-208ENST00000589104 LRRC37A5PQ49AS3 106 aa11.83□□□□□ -0.52
KDM4B-208ENST00000589104 C4orf46Q504U0 113 aa11.83□□□□□ -0.52
KDM4B-208ENST00000589104 ACTBL2Q562R1 376 aa11.83□□□□□ -0.52
KDM4B-208ENST00000589104 TMEM31Q5JXX7 168 aa11.83□□□□□ -0.52
KDM4B-208ENST00000589104 DCXRQ7Z4W1 244 aa11.83□□□□□ -0.52
KDM4B-208ENST00000589104 TRAPPC6BQ86SZ2 158 aa11.83□□□□□ -0.52
KDM4B-208ENST00000589104 OR1L3Q8NH93 324 aa11.83□□□□□ -0.52
KDM4B-208ENST00000589104 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.83□□□□□ -0.52
KDM4B-208ENST00000589104 TSEN15Q8WW01 171 aaKnown RBP11.83□□□□□ -0.52
KDM4B-208ENST00000589104 PBOV1Q9GZY1 135 aa11.83□□□□□ -0.52
KDM4B-208ENST00000589104 TMEM138Q9NPI0 162 aa11.83□□□□□ -0.52
KDM4B-208ENST00000589104 DUX4Q9UBX2 424 aa11.83□□□□□ -0.52
KDM4B-208ENST00000589104 ARID1AO14497 2285 aa11.83□□□□□ -0.52
KDM4B-208ENST00000589104 A0A1B0GW64 132 aa11.83□□□□□ -0.52
KDM4B-208ENST00000589104 TRAF3IP2O43734 574 aaPredicted RBP11.83□□□□□ -0.52
KDM4B-208ENST00000589104 STK17BO94768 372 aa11.83□□□□□ -0.52
KDM4B-208ENST00000589104 CYB5AP00167 134 aa11.83□□□□□ -0.52
KDM4B-208ENST00000589104 CHRM2P08172 466 aa11.83□□□□□ -0.52
KDM4B-208ENST00000589104 HRH1P35367 487 aa11.83□□□□□ -0.52
KDM4B-208ENST00000589104 RD3Q7Z3Z2 195 aa11.83□□□□□ -0.52
KDM4B-208ENST00000589104 DPPA2Q7Z7J5 298 aa11.83□□□□□ -0.52
KDM4B-208ENST00000589104 LRTM2Q8N967 370 aa11.83□□□□□ -0.52
KDM4B-208ENST00000589104 OR13C3Q8NGS6 347 aa11.83□□□□□ -0.52
KDM4B-208ENST00000589104 OR13G1Q8NGZ3 307 aa11.83□□□□□ -0.52
KDM4B-208ENST00000589104 ZNF501Q96CX3 271 aaPredicted RBP11.83□□□□□ -0.52
KDM4B-208ENST00000589104 MMABQ96EY8 250 aaPredicted RBP11.83□□□□□ -0.52
KDM4B-208ENST00000589104 UNKLQ9H9P5 680 aaKnown RBP11.83□□□□□ -0.52
KDM4B-208ENST00000589104 LPAR3Q9UBY5 353 aa11.83□□□□□ -0.52
KDM4B-208ENST00000589104 STARD10Q9Y365 291 aa11.83□□□□□ -0.52
KDM4B-208ENST00000589104 TIMM10BQ9Y5J6 103 aa11.83□□□□□ -0.52
KDM4B-208ENST00000589104 CSTBP04080 98 aaKnown RBP11.82□□□□□ -0.52
KDM4B-208ENST00000589104 ABOP16442 354 aa11.82□□□□□ -0.52
KDM4B-208ENST00000589104 FMODQ06828 376 aa11.82□□□□□ -0.52
KDM4B-208ENST00000589104 NCMAPQ5T1S8 102 aa11.82□□□□□ -0.52
KDM4B-208ENST00000589104 AWAT2Q6E213 333 aa11.82□□□□□ -0.52
KDM4B-208ENST00000589104 OR14K1Q8NGZ2 314 aa11.82□□□□□ -0.52
KDM4B-208ENST00000589104 NICN1Q9BSH3 213 aa11.82□□□□□ -0.52
KDM4B-208ENST00000589104 PCED1AQ9H1Q7 454 aa11.82□□□□□ -0.52
KDM4B-208ENST00000589104 SEBOXQ9HB31 216 aaPredicted RBP11.82□□□□□ -0.52
KDM4B-208ENST00000589104 SH2D2AQ9NP31 389 aa11.82□□□□□ -0.52
KDM4B-208ENST00000589104 POMT1Q9Y6A1 747 aa11.82□□□□□ -0.52
KDM4B-208ENST00000589104 KMT2EQ8IZD2 1858 aa11.82□□□□□ -0.52
KDM4B-208ENST00000589104 LAMA1P25391 3075 aa11.82□□□□□ -0.52
KDM4B-208ENST00000589104 ERCC1P07992 297 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms