RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 OTOGQ6ZRI0 2925 aa9.07□□□□□ -0.96
LIG3-203ENST00000585370 PHF3Q92576 2039 aaKnown RBP9.07□□□□□ -0.96
LIG3-203ENST00000585370 PCNX1Q96RV3 2341 aa9.06□□□□□ -0.96
LIG3-203ENST00000585370 A0A0G2JMP0 313 aa9.06□□□□□ -0.96
LIG3-203ENST00000585370 A0A0X1KG70 313 aa9.06□□□□□ -0.96
LIG3-203ENST00000585370 A0A1W2PQ09 198 aa9.06□□□□□ -0.96
LIG3-203ENST00000585370 DHRS3O75911 302 aa9.06□□□□□ -0.96
LIG3-203ENST00000585370 SCGNO76038 276 aa9.06□□□□□ -0.96
LIG3-203ENST00000585370 CRHP06850 196 aa9.06□□□□□ -0.96
LIG3-203ENST00000585370 AZGP1P25311 298 aaKnown RBP9.06□□□□□ -0.96
LIG3-203ENST00000585370 HTR5AP47898 357 aa9.06□□□□□ -0.96
LIG3-203ENST00000585370 PLP2Q04941 152 aa9.06□□□□□ -0.96
LIG3-203ENST00000585370 FAPQ12884 760 aa9.06□□□□□ -0.96
LIG3-203ENST00000585370 P2RY14Q15391 338 aa9.06□□□□□ -0.96
LIG3-203ENST00000585370 C3AR1Q16581 482 aa9.06□□□□□ -0.96
LIG3-203ENST00000585370 C2orf76Q3KRA6 126 aa9.06□□□□□ -0.96
LIG3-203ENST00000585370 NSUN5P2Q63ZY6 315 aa9.06□□□□□ -0.96
LIG3-203ENST00000585370 ZNF774Q6NX45 483 aa9.06□□□□□ -0.96
LIG3-203ENST00000585370 UTS2BQ765I0 119 aa9.06□□□□□ -0.96
LIG3-203ENST00000585370 FAM214BQ7L5A3 538 aa9.06□□□□□ -0.96
LIG3-203ENST00000585370 OR4M2Q8NGB6 313 aa9.06□□□□□ -0.96
LIG3-203ENST00000585370 OR14K1Q8NGZ2 314 aa9.06□□□□□ -0.96
LIG3-203ENST00000585370 SYNPRQ8TBG9 265 aa9.06□□□□□ -0.96
LIG3-203ENST00000585370 AKAP1Q92667 903 aaKnown RBP eCLIP9.06□□□□□ -0.96
LIG3-203ENST00000585370 HTRA1Q92743 480 aa9.06□□□□□ -0.96
LIG3-203ENST00000585370 RFT1Q96AA3 541 aa9.06□□□□□ -0.96
LIG3-203ENST00000585370 BOD1Q96IK1 185 aa9.06□□□□□ -0.96
LIG3-203ENST00000585370 SLX1AQ9BQ83 275 aa9.06□□□□□ -0.96
LIG3-203ENST00000585370 THAP7Q9BT49 309 aaPredicted RBP9.06□□□□□ -0.96
LIG3-203ENST00000585370 METTL17Q9H7H0 456 aaPredicted RBP9.06□□□□□ -0.96
LIG3-203ENST00000585370 PLEKHA1Q9HB21 404 aa9.06□□□□□ -0.96
LIG3-203ENST00000585370 RHBDL2Q9NX52 303 aa9.06□□□□□ -0.96
LIG3-203ENST00000585370 FBLN5Q9UBX5 448 aa9.06□□□□□ -0.96
LIG3-203ENST00000585370 CLEC4AQ9UMR7 237 aa9.06□□□□□ -0.96
LIG3-203ENST00000585370 N6AMT1Q9Y5N5 214 aa9.06□□□□□ -0.96
LIG3-203ENST00000585370 ADGRG4Q8IZF6 3080 aa9.05□□□□□ -0.96
LIG3-203ENST00000585370 H3BSH0 61 aa9.05□□□□□ -0.96
LIG3-203ENST00000585370 XRCC3O43542 346 aa9.05□□□□□ -0.96
LIG3-203ENST00000585370 XRCC2O43543 280 aa9.05□□□□□ -0.96
LIG3-203ENST00000585370 PFDN1O60925 122 aa9.05□□□□□ -0.96
LIG3-203ENST00000585370 WDR1O75083 606 aa9.05□□□□□ -0.96
LIG3-203ENST00000585370 LCATP04180 440 aa9.05□□□□□ -0.96
LIG3-203ENST00000585370 SERPINA5P05154 406 aa9.05□□□□□ -0.96
LIG3-203ENST00000585370 GSTT2BP0CG30 244 aa9.05□□□□□ -0.96
LIG3-203ENST00000585370 UBBP0CG47 229 aa9.05□□□□□ -0.96
LIG3-203ENST00000585370 SLC2A1P11166 492 aa9.05□□□□□ -0.96
LIG3-203ENST00000585370 ARSBP15848 533 aa9.05□□□□□ -0.96
LIG3-203ENST00000585370 RAB6AP20340 208 aa9.05□□□□□ -0.96
LIG3-203ENST00000585370 MAP2K3P46734 347 aa9.05□□□□□ -0.96
LIG3-203ENST00000585370 SPOCK1Q08629 439 aa9.05□□□□□ -0.96
LIG3-203ENST00000585370 GUSBP1Q15486 140 aa9.05□□□□□ -0.96
LIG3-203ENST00000585370 PABPC1L2AQ5JQF8 200 aa9.05□□□□□ -0.96
LIG3-203ENST00000585370 GLYATL3Q5SZD4 288 aa9.05□□□□□ -0.96
LIG3-203ENST00000585370 ZBTB37Q5TC79 503 aa9.05□□□□□ -0.96
LIG3-203ENST00000585370 ZNF324BQ6AW86 544 aaPredicted RBP9.05□□□□□ -0.96
LIG3-203ENST00000585370 ASPHD2Q6ICH7 369 aa9.05□□□□□ -0.96
LIG3-203ENST00000585370 GDPD3Q7L5L3 318 aa9.05□□□□□ -0.96
LIG3-203ENST00000585370 LYPD6Q86Y78 171 aa9.05□□□□□ -0.96
LIG3-203ENST00000585370 DNAAF1Q8NEP3 725 aa9.05□□□□□ -0.96
LIG3-203ENST00000585370 OR6K3Q8NGY3 331 aa9.05□□□□□ -0.96
LIG3-203ENST00000585370 AKR7LQ8NHP1 331 aa9.05□□□□□ -0.96
LIG3-203ENST00000585370 DEDD2Q8WXF8 326 aa9.05□□□□□ -0.96
LIG3-203ENST00000585370 BCL2L2Q92843 193 aaPredicted RBP9.05□□□□□ -0.96
LIG3-203ENST00000585370 SLC25A28Q96A46 364 aa9.05□□□□□ -0.96
LIG3-203ENST00000585370 SGK3Q96BR1 496 aa9.05□□□□□ -0.96
LIG3-203ENST00000585370 SLC25A38Q96DW6 304 aa9.05□□□□□ -0.96
LIG3-203ENST00000585370 ADAT3Q96EY9 351 aaPredicted RBP9.05□□□□□ -0.96
LIG3-203ENST00000585370 CPNE2Q96FN4 548 aaPredicted RBP9.05□□□□□ -0.96
LIG3-203ENST00000585370 FAM71F1Q96KD3 344 aaPredicted RBP9.05□□□□□ -0.96
LIG3-203ENST00000585370 GPR137Q96N19 417 aa9.05□□□□□ -0.96
LIG3-203ENST00000585370 ZFP3Q96NJ6 502 aa9.05□□□□□ -0.96
LIG3-203ENST00000585370 TAAR6Q96RI8 345 aa9.05□□□□□ -0.96
LIG3-203ENST00000585370 TRIB1Q96RU8 372 aa9.05□□□□□ -0.96
LIG3-203ENST00000585370 C7orf50Q9BRJ6 194 aaKnown RBP9.05□□□□□ -0.96
LIG3-203ENST00000585370 C1QTNF5Q9BXJ0 243 aa9.05□□□□□ -0.96
LIG3-203ENST00000585370 ZNF319Q9P2F9 582 aa9.05□□□□□ -0.96
LIG3-203ENST00000585370 GHRLQ9UBU3 117 aa9.05□□□□□ -0.96
LIG3-203ENST00000585370 RAB22AQ9UL26 194 aa9.05□□□□□ -0.96
LIG3-203ENST00000585370 TBC1D24Q9ULP9 559 aa9.05□□□□□ -0.96
LIG3-203ENST00000585370 AKAP9Q99996 3911 aa9.05□□□□□ -0.96
LIG3-203ENST00000585370 POLQO75417 2590 aa9.05□□□□□ -0.96
LIG3-203ENST00000585370 PDZD2O15018 2839 aa9.04□□□□□ -0.96
LIG3-203ENST00000585370 A0A0B4J203 849 aa9.04□□□□□ -0.96
LIG3-203ENST00000585370 METTL21EPA6NDL7 271 aa9.04□□□□□ -0.96
LIG3-203ENST00000585370 CENPXA8MT69 81 aa9.04□□□□□ -0.96
LIG3-203ENST00000585370 GABARAPH6UMI1 98 aa9.04□□□□□ -0.96
LIG3-203ENST00000585370 ZG16O60844 167 aa9.04□□□□□ -0.96
LIG3-203ENST00000585370 BPNT1O95861 308 aa9.04□□□□□ -0.96
LIG3-203ENST00000585370 ECDO95905 644 aaPredicted RBP9.04□□□□□ -0.96
LIG3-203ENST00000585370 IGHV3-9P01782 118 aa9.04□□□□□ -0.96
LIG3-203ENST00000585370 ITGA5P08648 1049 aa9.04□□□□□ -0.96
LIG3-203ENST00000585370 PRF1P14222 555 aa9.04□□□□□ -0.96
LIG3-203ENST00000585370 POU3F4P49335 361 aa9.04□□□□□ -0.96
LIG3-203ENST00000585370 CLDN12P56749 244 aa9.04□□□□□ -0.96
LIG3-203ENST00000585370 AP3S2P59780 193 aa9.04□□□□□ -0.96
LIG3-203ENST00000585370 RIPPLY1Q0D2K3 151 aa9.04□□□□□ -0.96
LIG3-203ENST00000585370 TMEM69Q5SWH9 247 aa9.04□□□□□ -0.96
LIG3-203ENST00000585370 C1QTNF12Q5T7M4 302 aa9.04□□□□□ -0.96
LIG3-203ENST00000585370 RAB12Q6IQ22 244 aa9.04□□□□□ -0.96
LIG3-203ENST00000585370 FAM180AQ6UWF9 173 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms