RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 SLC25A47Q6Q0C1 308 aa8.91□□□□□ -0.98
SS18-221ENST00000582448 PRSS57Q6UWY2 283 aa8.91□□□□□ -0.98
SS18-221ENST00000582448 LRRN1Q6UXK5 716 aa8.91□□□□□ -0.98
SS18-221ENST00000582448 NHLRC1Q6VVB1 395 aa8.91□□□□□ -0.98
SS18-221ENST00000582448 DCXRQ7Z4W1 244 aa8.91□□□□□ -0.98
SS18-221ENST00000582448 OR6Q1Q8NGQ2 317 aa8.91□□□□□ -0.98
SS18-221ENST00000582448 C11orf40Q8WZ69 217 aa8.91□□□□□ -0.98
SS18-221ENST00000582448 TMEM54Q969K7 222 aa8.91□□□□□ -0.98
SS18-221ENST00000582448 ADGRG7Q96K78 797 aa8.91□□□□□ -0.98
SS18-221ENST00000582448 C8orf49Q96NF6 230 aa8.91□□□□□ -0.98
SS18-221ENST00000582448 ABHD6Q9BV23 337 aa8.91□□□□□ -0.98
SS18-221ENST00000582448 SFXN3Q9BWM7 321 aa8.91□□□□□ -0.98
SS18-221ENST00000582448 C1orf198Q9H425 327 aa8.91□□□□□ -0.98
SS18-221ENST00000582448 ELOVL3Q9HB03 270 aa8.91□□□□□ -0.98
SS18-221ENST00000582448 MRPL22Q9NWU5 206 aaKnown RBP8.91□□□□□ -0.98
SS18-221ENST00000582448 SLCO1C1Q9NYB5 712 aa8.91□□□□□ -0.98
SS18-221ENST00000582448 GTF2A1LQ9UNN4 478 aa8.91□□□□□ -0.98
SS18-221ENST00000582448 KLHDC2Q9Y2U9 406 aa8.91□□□□□ -0.98
SS18-221ENST00000582448 IQCMA0A1B0GVH7 501 aa8.9□□□□□ -0.98
SS18-221ENST00000582448 A8MXE2 369 aa8.9□□□□□ -0.98
SS18-221ENST00000582448 H0YC42 278 aa8.9□□□□□ -0.98
SS18-221ENST00000582448 DHHO43323 396 aa8.9□□□□□ -0.98
SS18-221ENST00000582448 CYTIPO60759 359 aa8.9□□□□□ -0.98
SS18-221ENST00000582448 MRPL33O75394 65 aaKnown RBP8.9□□□□□ -0.98
SS18-221ENST00000582448 FCGR2AP12318 317 aa8.9□□□□□ -0.98
SS18-221ENST00000582448 MSR1P21757 451 aa8.9□□□□□ -0.98
SS18-221ENST00000582448 HSD11B1P28845 292 aa8.9□□□□□ -0.98
SS18-221ENST00000582448 LHX2P50458 406 aa8.9□□□□□ -0.98
SS18-221ENST00000582448 CCR9P51686 369 aa8.9□□□□□ -0.98
SS18-221ENST00000582448 LSM6P62312 80 aaKnown RBP8.9□□□□□ -0.98
SS18-221ENST00000582448 ZNF45Q02386 682 aa8.9□□□□□ -0.98
SS18-221ENST00000582448 HNRNPA0Q13151 305 aaKnown RBP8.9□□□□□ -0.98
SS18-221ENST00000582448 RNPS1Q15287 305 aaKnown RBP8.9□□□□□ -0.98
SS18-221ENST00000582448 SGCAQ16586 387 aa8.9□□□□□ -0.98
SS18-221ENST00000582448 PCK2Q16822 640 aa8.9□□□□□ -0.98
SS18-221ENST00000582448 HSD17B12Q53GQ0 312 aa8.9□□□□□ -0.98
SS18-221ENST00000582448 ZMAT1Q5H9K5 638 aa8.9□□□□□ -0.98
SS18-221ENST00000582448 C10orf128Q5T292 105 aa8.9□□□□□ -0.98
SS18-221ENST00000582448 P4HA3Q7Z4N8 544 aa8.9□□□□□ -0.98
SS18-221ENST00000582448 CNEP1R1Q8N9A8 125 aa8.9□□□□□ -0.98
SS18-221ENST00000582448 MAPK1IP1LQ8NDC0 245 aa8.9□□□□□ -0.98
SS18-221ENST00000582448 ACOT12Q8WYK0 555 aa8.9□□□□□ -0.98
SS18-221ENST00000582448 ROBO4Q8WZ75 1007 aa8.9□□□□□ -0.98
SS18-221ENST00000582448 KCNS3Q9BQ31 491 aa8.9□□□□□ -0.98
SS18-221ENST00000582448 NXF2Q9GZY0 626 aaKnown RBP8.9□□□□□ -0.98
SS18-221ENST00000582448 MEGF9Q9H1U4 602 aa8.9□□□□□ -0.98
SS18-221ENST00000582448 PIGMQ9H3S5 423 aa8.9□□□□□ -0.98
SS18-221ENST00000582448 NIPAL2Q9H841 368 aa8.9□□□□□ -0.98
SS18-221ENST00000582448 PALMDQ9NP74 551 aa8.9□□□□□ -0.98
SS18-221ENST00000582448 CENPMQ9NSP4 180 aa8.9□□□□□ -0.98
SS18-221ENST00000582448 FLVCR1Q9Y5Y0 555 aa8.9□□□□□ -0.98
SS18-221ENST00000582448 SIRT4Q9Y6E7 314 aaPredicted RBP8.9□□□□□ -0.98
SS18-221ENST00000582448 HRNRQ86YZ3 2850 aaPredicted RBP8.9□□□□□ -0.99
SS18-221ENST00000582448 TRAV1-2A0A0B4J238 106 aa8.89□□□□□ -0.99
SS18-221ENST00000582448 ZNF716A6NP11 495 aa8.89□□□□□ -0.99
SS18-221ENST00000582448 LOC110117498-PIK3R3F6TDL0 507 aa8.89□□□□□ -0.99
SS18-221ENST00000582448 CRLF1O75462 422 aa8.89□□□□□ -0.99
SS18-221ENST00000582448 UPK3AO75631 287 aa8.89□□□□□ -0.99
SS18-221ENST00000582448 MPZL1O95297 269 aa8.89□□□□□ -0.99
SS18-221ENST00000582448 APOC1P02654 83 aa8.89□□□□□ -0.99
SS18-221ENST00000582448 CD2P06729 351 aa8.89□□□□□ -0.99
SS18-221ENST00000582448 OCM2P0CE71 109 aa8.89□□□□□ -0.99
SS18-221ENST00000582448 CPN1P15169 458 aa8.89□□□□□ -0.99
SS18-221ENST00000582448 NPR2P20594 1047 aa8.89□□□□□ -0.99
SS18-221ENST00000582448 DCTDP32321 178 aa8.89□□□□□ -0.99
SS18-221ENST00000582448 OPRL1P41146 370 aa8.89□□□□□ -0.99
SS18-221ENST00000582448 RPS27P42677 84 aaKnown RBP8.89□□□□□ -0.99
SS18-221ENST00000582448 PTH2RP49190 550 aa8.89□□□□□ -0.99
SS18-221ENST00000582448 BMXP51813 675 aa8.89□□□□□ -0.99
SS18-221ENST00000582448 CLDN18P56856 261 aa8.89□□□□□ -0.99
SS18-221ENST00000582448 IL13RA1P78552 427 aa8.89□□□□□ -0.99
SS18-221ENST00000582448 ICAM4Q14773 271 aa8.89□□□□□ -0.99
SS18-221ENST00000582448 Q499Y3 187 aa8.89□□□□□ -0.99
SS18-221ENST00000582448 DDI2Q5TDH0 399 aa8.89□□□□□ -0.99
SS18-221ENST00000582448 OR7E24Q6IFN5 339 aa8.89□□□□□ -0.99
SS18-221ENST00000582448 ZNF704Q6ZNC4 412 aaPredicted RBP8.89□□□□□ -0.99
SS18-221ENST00000582448 TMEM91Q6ZNR0 172 aa8.89□□□□□ -0.99
SS18-221ENST00000582448 RHOUQ7L0Q8 258 aa8.89□□□□□ -0.99
SS18-221ENST00000582448 LINC00346Q8IVM7 164 aa8.89□□□□□ -0.99
SS18-221ENST00000582448 C20orf196Q8IYI0 205 aa8.89□□□□□ -0.99
SS18-221ENST00000582448 TMEM123Q8N131 208 aa8.89□□□□□ -0.99
SS18-221ENST00000582448 OR2G2Q8NGZ5 317 aa8.89□□□□□ -0.99
SS18-221ENST00000582448 GPR148Q8TDV2 347 aa8.89□□□□□ -0.99
SS18-221ENST00000582448 RNF128Q8TEB7 428 aa8.89□□□□□ -0.99
SS18-221ENST00000582448 TSEN15Q8WW01 171 aaKnown RBP8.89□□□□□ -0.99
SS18-221ENST00000582448 TMEM45BQ96B21 275 aa8.89□□□□□ -0.99
SS18-221ENST00000582448 SLAMF6Q96DU3 332 aa8.89□□□□□ -0.99
SS18-221ENST00000582448 TRMT61AQ96FX7 289 aaKnown RBP8.89□□□□□ -0.99
SS18-221ENST00000582448 PGLYRP3Q96LB9 341 aa8.89□□□□□ -0.99
SS18-221ENST00000582448 ZNF385AQ96PM9 386 aaKnown RBP8.89□□□□□ -0.99
SS18-221ENST00000582448 NELFAQ9H3P2 528 aa8.89□□□□□ -0.99
SS18-221ENST00000582448 POLE4Q9NR33 117 aa8.89□□□□□ -0.99
SS18-221ENST00000582448 CKLFQ9UBR5 152 aa8.89□□□□□ -0.99
SS18-221ENST00000582448 CYB5R1Q9UHQ9 305 aa8.89□□□□□ -0.99
SS18-221ENST00000582448 ING1Q9UK53 422 aaPredicted RBP8.89□□□□□ -0.99
SS18-221ENST00000582448 NOSIPQ9Y314 301 aaKnown RBP8.89□□□□□ -0.99
SS18-221ENST00000582448 LRP12Q9Y561 859 aa8.89□□□□□ -0.99
SS18-221ENST00000582448 ARID1AO14497 2285 aa8.89□□□□□ -0.99
SS18-221ENST00000582448 HIVEP2P31629 2446 aa8.88□□□□□ -0.99
SS18-221ENST00000582448 IGKV3D-15A0A087WSY6 115 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms