RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 RPS4Y2Q8TD47 263 aa10.39□□□□□ -0.75
IFT20-207ENST00000578547 RGP1Q92546 391 aaPredicted RBP10.39□□□□□ -0.75
IFT20-207ENST00000578547 GTF3AQ92664 365 aaKnown RBP10.39□□□□□ -0.75
IFT20-207ENST00000578547 MUL1Q969V5 352 aa10.39□□□□□ -0.75
IFT20-207ENST00000578547 PGLYRP3Q96LB9 341 aa10.39□□□□□ -0.75
IFT20-207ENST00000578547 DYNLRB1Q9NP97 96 aa10.39□□□□□ -0.75
IFT20-207ENST00000578547 ISYNA1Q9NPH2 558 aa10.39□□□□□ -0.75
IFT20-207ENST00000578547 HHLA2Q9UM44 414 aa10.39□□□□□ -0.75
IFT20-207ENST00000578547 PIGLQ9Y2B2 252 aa10.39□□□□□ -0.75
IFT20-207ENST00000578547 PLCE1Q9P212 2302 aa10.39□□□□□ -0.75
IFT20-207ENST00000578547 AKAP6Q13023 2319 aa10.38□□□□□ -0.75
IFT20-207ENST00000578547 IGLV3-9A0A075B6K5 115 aa10.38□□□□□ -0.75
IFT20-207ENST00000578547 PLSCR5A0PG75 271 aa10.38□□□□□ -0.75
IFT20-207ENST00000578547 A6NIN4 97 aa10.38□□□□□ -0.75
IFT20-207ENST00000578547 PLPP2O43688 288 aa10.38□□□□□ -0.75
IFT20-207ENST00000578547 LILRA1O75019 489 aa10.38□□□□□ -0.75
IFT20-207ENST00000578547 MTRF1O75570 445 aaKnown RBP10.38□□□□□ -0.75
IFT20-207ENST00000578547 DHRS3O75911 302 aa10.38□□□□□ -0.75
IFT20-207ENST00000578547 IGHV3-13P01766 116 aa10.38□□□□□ -0.75
IFT20-207ENST00000578547 ISG15P05161 165 aa10.38□□□□□ -0.75
IFT20-207ENST00000578547 SOD3P08294 240 aa10.38□□□□□ -0.75
IFT20-207ENST00000578547 CPEP16870 476 aa10.38□□□□□ -0.75
IFT20-207ENST00000578547 FAHP16930 419 aa10.38□□□□□ -0.75
IFT20-207ENST00000578547 ZNF20P17024 532 aa10.38□□□□□ -0.75
IFT20-207ENST00000578547 KITLGP21583 273 aa10.38□□□□□ -0.75
IFT20-207ENST00000578547 CCL1P22362 96 aa10.38□□□□□ -0.75
IFT20-207ENST00000578547 ACKR3P25106 362 aa10.38□□□□□ -0.75
IFT20-207ENST00000578547 MAGEB1P43366 347 aa10.38□□□□□ -0.75
IFT20-207ENST00000578547 MAP2K3P46734 347 aa10.38□□□□□ -0.75
IFT20-207ENST00000578547 SOX2P48431 317 aa10.38□□□□□ -0.75
IFT20-207ENST00000578547 GP2P55259 537 aaKnown RBP10.38□□□□□ -0.75
IFT20-207ENST00000578547 SNRPD2P62316 118 aaKnown RBP10.38□□□□□ -0.75
IFT20-207ENST00000578547 RPS25P62851 125 aaKnown RBP10.38□□□□□ -0.75
IFT20-207ENST00000578547 OR8B8Q15620 311 aa10.38□□□□□ -0.75
IFT20-207ENST00000578547 EFNB3Q15768 340 aa10.38□□□□□ -0.75
IFT20-207ENST00000578547 AGAP6Q5VW22 663 aa10.38□□□□□ -0.75
IFT20-207ENST00000578547 SEMA6DQ8NFY4 1073 aa10.38□□□□□ -0.75
IFT20-207ENST00000578547 GPR148Q8TDV2 347 aa10.38□□□□□ -0.75
IFT20-207ENST00000578547 NRGNQ92686 78 aa10.38□□□□□ -0.75
IFT20-207ENST00000578547 TMEM203Q969S6 136 aa10.38□□□□□ -0.75
IFT20-207ENST00000578547 LIME1Q9H400 295 aa10.38□□□□□ -0.75
IFT20-207ENST00000578547 MSL2Q9HCI7 577 aa10.38□□□□□ -0.75
IFT20-207ENST00000578547 DHDHQ9UQ10 334 aa10.38□□□□□ -0.75
IFT20-207ENST00000578547 LAMP3Q9UQV4 416 aa10.38□□□□□ -0.75
IFT20-207ENST00000578547 ZNF281Q9Y2X9 895 aa10.38□□□□□ -0.75
IFT20-207ENST00000578547 SPG11Q96JI7 2443 aa10.38□□□□□ -0.75
IFT20-207ENST00000578547 TACC2O95359 2948 aa10.37□□□□□ -0.75
IFT20-207ENST00000578547 APCP25054 2843 aa10.37□□□□□ -0.75
IFT20-207ENST00000578547 TRIM64CA6NLI5 447 aa10.37□□□□□ -0.75
IFT20-207ENST00000578547 ANKRD30BLA7E2S9 258 aa10.37□□□□□ -0.75
IFT20-207ENST00000578547 IQCF6A8MYZ5 107 aa10.37□□□□□ -0.75
IFT20-207ENST00000578547 B9A039 149 aa10.37□□□□□ -0.75
IFT20-207ENST00000578547 M0R233 179 aa10.37□□□□□ -0.75
IFT20-207ENST00000578547 NAT2P11245 290 aa10.37□□□□□ -0.75
IFT20-207ENST00000578547 GNALP38405 381 aa10.37□□□□□ -0.75
IFT20-207ENST00000578547 RIPPLY1Q0D2K3 151 aa10.37□□□□□ -0.75
IFT20-207ENST00000578547 TNK1Q13470 666 aa10.37□□□□□ -0.75
IFT20-207ENST00000578547 TPBGQ13641 420 aa10.37□□□□□ -0.75
IFT20-207ENST00000578547 SSX1Q16384 188 aa10.37□□□□□ -0.75
IFT20-207ENST00000578547 C20orf204Q6ZNR8 217 aa10.37□□□□□ -0.75
IFT20-207ENST00000578547 PHC2Q8IXK0 858 aa10.37□□□□□ -0.75
IFT20-207ENST00000578547 PLPP7Q8NBV4 271 aa10.37□□□□□ -0.75
IFT20-207ENST00000578547 CSNK2A3Q8NEV1 391 aa10.37□□□□□ -0.75
IFT20-207ENST00000578547 OR14K1Q8NGZ2 314 aa10.37□□□□□ -0.75
IFT20-207ENST00000578547 DVL3Q92997 716 aaPredicted RBP10.37□□□□□ -0.75
IFT20-207ENST00000578547 PAPOLGQ9BWT3 736 aaKnown RBP10.37□□□□□ -0.75
IFT20-207ENST00000578547 CBLN4Q9NTU7 201 aa10.37□□□□□ -0.75
IFT20-207ENST00000578547 GPR160Q9UJ42 338 aa10.37□□□□□ -0.75
IFT20-207ENST00000578547 ENPP5Q9UJA9 477 aa10.37□□□□□ -0.75
IFT20-207ENST00000578547 V9GYS6 101 aa10.37□□□□□ -0.75
IFT20-207ENST00000578547 ITPR2Q14571 2701 aa10.37□□□□□ -0.75
IFT20-207ENST00000578547 CACNA1DQ01668 2161 aa10.36□□□□□ -0.75
IFT20-207ENST00000578547 LRBAP50851 2863 aa10.36□□□□□ -0.75
IFT20-207ENST00000578547 ZNF816-ZNF321PA0A0X1KG74 233 aa10.36□□□□□ -0.75
IFT20-207ENST00000578547 LOC390937A0A1W2PQ73 354 aa10.36□□□□□ -0.75
IFT20-207ENST00000578547 ZSCAN5BA6NJL1 495 aa10.36□□□□□ -0.75
IFT20-207ENST00000578547 CCRL2O00421 344 aa10.36□□□□□ -0.75
IFT20-207ENST00000578547 SPRY3O43610 288 aa10.36□□□□□ -0.75
IFT20-207ENST00000578547 HLA-DPB1P04440 258 aa10.36□□□□□ -0.75
IFT20-207ENST00000578547 DANCRP0C864 163 aa10.36□□□□□ -0.75
IFT20-207ENST00000578547 OCM2P0CE71 109 aa10.36□□□□□ -0.75
IFT20-207ENST00000578547 ZNF12P17014 697 aa10.36□□□□□ -0.75
IFT20-207ENST00000578547 CA6P23280 308 aa10.36□□□□□ -0.75
IFT20-207ENST00000578547 LIPAP38571 399 aa10.36□□□□□ -0.75
IFT20-207ENST00000578547 DDOSTP39656 456 aa10.36□□□□□ -0.75
IFT20-207ENST00000578547 EVX1P49640 407 aa10.36□□□□□ -0.75
IFT20-207ENST00000578547 ZNF81P51508 661 aa10.36□□□□□ -0.75
IFT20-207ENST00000578547 MMP15P51511 669 aa10.36□□□□□ -0.75
IFT20-207ENST00000578547 PRDX4Q13162 271 aa10.36□□□□□ -0.75
IFT20-207ENST00000578547 OR8G1Q15617 311 aa10.36□□□□□ -0.75
IFT20-207ENST00000578547 MOGQ16653 247 aa10.36□□□□□ -0.75
IFT20-207ENST00000578547 MST1LQ2TV78 715 aa10.36□□□□□ -0.75
IFT20-207ENST00000578547 YIF1BQ5BJH7 314 aa10.36□□□□□ -0.75
IFT20-207ENST00000578547 SYT6Q5T7P8 510 aaPredicted RBP10.36□□□□□ -0.75
IFT20-207ENST00000578547 ZCCHC24Q8N2G6 241 aaKnown RBP10.36□□□□□ -0.75
IFT20-207ENST00000578547 FTMTQ8N4E7 242 aa10.36□□□□□ -0.75
IFT20-207ENST00000578547 OR8G5Q8NG78 346 aa10.36□□□□□ -0.75
IFT20-207ENST00000578547 OR2Z1Q8NG97 314 aa10.36□□□□□ -0.75
IFT20-207ENST00000578547 OR10AD1Q8NGE0 317 aa10.36□□□□□ -0.75
IFT20-207ENST00000578547 PIGCQ92535 297 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms