RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 CDONQ4KMG0 1287 aa9.28□□□□□ -0.92
SMARCE1-214ENST00000578112 TEX30Q5JUR7 227 aa9.28□□□□□ -0.92
SMARCE1-214ENST00000578112 ATPAF1Q5TC12 328 aaPredicted RBP9.28□□□□□ -0.92
SMARCE1-214ENST00000578112 NCR3LG1Q68D85 454 aa9.28□□□□□ -0.92
SMARCE1-214ENST00000578112 DHRS7BQ6IAN0 325 aaPredicted RBP9.28□□□□□ -0.92
SMARCE1-214ENST00000578112 TBPL2Q6SJ96 375 aa9.28□□□□□ -0.92
SMARCE1-214ENST00000578112 ZNF600Q6ZNG1 722 aa9.28□□□□□ -0.92
SMARCE1-214ENST00000578112 LIAT1Q6ZQX7 453 aa9.28□□□□□ -0.92
SMARCE1-214ENST00000578112 SLC36A1Q7Z2H8 476 aa9.28□□□□□ -0.92
SMARCE1-214ENST00000578112 OR10Z1Q8NGY1 313 aa9.28□□□□□ -0.92
SMARCE1-214ENST00000578112 FANK1Q8TC84 345 aa9.28□□□□□ -0.92
SMARCE1-214ENST00000578112 FAM162AQ96A26 154 aa9.28□□□□□ -0.92
SMARCE1-214ENST00000578112 SLCO4A1Q96BD0 722 aa9.28□□□□□ -0.92
SMARCE1-214ENST00000578112 ZNF799Q96GE5 643 aa9.28□□□□□ -0.92
SMARCE1-214ENST00000578112 ERMAPQ96PL5 475 aaPredicted RBP9.28□□□□□ -0.92
SMARCE1-214ENST00000578112 TOR3AQ9H497 397 aa9.28□□□□□ -0.92
SMARCE1-214ENST00000578112 ABCD2Q9UBJ2 740 aa9.28□□□□□ -0.92
SMARCE1-214ENST00000578112 WNK2Q9Y3S1 2297 aa9.28□□□□□ -0.92
SMARCE1-214ENST00000578112 ZNF823P16415 610 aa9.28□□□□□ -0.92
SMARCE1-214ENST00000578112 OMGP23515 440 aa9.28□□□□□ -0.92
SMARCE1-214ENST00000578112 GGT2P36268 569 aa9.28□□□□□ -0.92
SMARCE1-214ENST00000578112 FXYD6P3P58550 94 aa9.28□□□□□ -0.92
SMARCE1-214ENST00000578112 OR8B8Q15620 311 aa9.28□□□□□ -0.92
SMARCE1-214ENST00000578112 CYB561A3Q8NBI2 242 aa9.28□□□□□ -0.92
SMARCE1-214ENST00000578112 PPP1R14AQ96A00 147 aa9.28□□□□□ -0.92
SMARCE1-214ENST00000578112 EFCAB1Q9HAE3 211 aa9.28□□□□□ -0.92
SMARCE1-214ENST00000578112 RAB18Q9NP72 206 aa9.28□□□□□ -0.92
SMARCE1-214ENST00000578112 ZNRD1Q9P1U0 126 aa9.28□□□□□ -0.92
SMARCE1-214ENST00000578112 RPUSD1Q9UJJ7 312 aaKnown RBP9.28□□□□□ -0.92
SMARCE1-214ENST00000578112 GGT3PA6NGU5 568 aa9.27□□□□□ -0.93
SMARCE1-214ENST00000578112 M0R1W7 72 aa9.27□□□□□ -0.93
SMARCE1-214ENST00000578112 CCDC22O60826 627 aa9.27□□□□□ -0.93
SMARCE1-214ENST00000578112 YAP1P46937 504 aaKnown RBP9.27□□□□□ -0.93
SMARCE1-214ENST00000578112 SPIBQ01892 262 aa9.27□□□□□ -0.93
SMARCE1-214ENST00000578112 PCK2Q16822 640 aa9.27□□□□□ -0.93
SMARCE1-214ENST00000578112 CFAP77Q6ZQR2 320 aa9.27□□□□□ -0.93
SMARCE1-214ENST00000578112 OR6V1Q8N148 313 aa9.27□□□□□ -0.93
SMARCE1-214ENST00000578112 KCNJ15Q99712 375 aa9.27□□□□□ -0.93
SMARCE1-214ENST00000578112 PKP2Q99959 881 aa9.27□□□□□ -0.93
SMARCE1-214ENST00000578112 TLNRD1Q9H1K6 362 aa9.27□□□□□ -0.93
SMARCE1-214ENST00000578112 NDUFAF4Q9P032 175 aa9.27□□□□□ -0.93
SMARCE1-214ENST00000578112 BAIAP2Q9UQB8 552 aa9.27□□□□□ -0.93
SMARCE1-214ENST00000578112 FAM96BQ9Y3D0 163 aa9.27□□□□□ -0.93
SMARCE1-214ENST00000578112 SVEP1Q4LDE5 3571 aa9.27□□□□□ -0.93
SMARCE1-214ENST00000578112 F5H5K5 113 aa9.27□□□□□ -0.93
SMARCE1-214ENST00000578112 RNASEK-C17orf49H0YIS7 233 aa9.27□□□□□ -0.93
SMARCE1-214ENST00000578112 GMNNO75496 209 aa9.27□□□□□ -0.93
SMARCE1-214ENST00000578112 EEF1B2P24534 225 aaKnown RBP9.27□□□□□ -0.93
SMARCE1-214ENST00000578112 GSK3BP49841 420 aa9.27□□□□□ -0.93
SMARCE1-214ENST00000578112 PRSS12P56730 875 aa9.27□□□□□ -0.93
SMARCE1-214ENST00000578112 GRB2P62993 217 aaKnown RBP9.27□□□□□ -0.93
SMARCE1-214ENST00000578112 HERPUD1Q15011 391 aa9.27□□□□□ -0.93
SMARCE1-214ENST00000578112 PRAMEF6Q5VXH4 476 aa9.27□□□□□ -0.93
SMARCE1-214ENST00000578112 RUSC1-AS1Q66K80 236 aa9.27□□□□□ -0.93
SMARCE1-214ENST00000578112 Q6ZSV7 163 aa9.27□□□□□ -0.93
SMARCE1-214ENST00000578112 OR2T4Q8NH00 348 aa9.27□□□□□ -0.93
SMARCE1-214ENST00000578112 GNPDA2Q8TDQ7 276 aa9.27□□□□□ -0.93
SMARCE1-214ENST00000578112 RCN3Q96D15 328 aa9.27□□□□□ -0.93
SMARCE1-214ENST00000578112 C7orf34Q96L11 122 aa9.27□□□□□ -0.93
SMARCE1-214ENST00000578112 TSC22D3Q99576 134 aa9.27□□□□□ -0.93
SMARCE1-214ENST00000578112 OR52D1Q9H346 318 aa9.27□□□□□ -0.93
SMARCE1-214ENST00000578112 RGCCQ9H4X1 137 aa9.27□□□□□ -0.93
SMARCE1-214ENST00000578112 CCDC134Q9H6E4 229 aa9.27□□□□□ -0.93
SMARCE1-214ENST00000578112 GORASP2Q9H8Y8 452 aa9.27□□□□□ -0.93
SMARCE1-214ENST00000578112 DCAF13Q9NV06 445 aaKnown RBP9.27□□□□□ -0.93
SMARCE1-214ENST00000578112 C1orf123Q9NWV4 160 aa9.27□□□□□ -0.93
SMARCE1-214ENST00000578112 SNX13Q9Y5W8 968 aa9.27□□□□□ -0.93
SMARCE1-214ENST00000578112 SOX21Q9Y651 276 aaPredicted RBP9.27□□□□□ -0.93
SMARCE1-214ENST00000578112 ANKRD30BLA7E2S9 258 aa9.26□□□□□ -0.93
SMARCE1-214ENST00000578112 NME4O00746 187 aa9.26□□□□□ -0.93
SMARCE1-214ENST00000578112 HLA-DPB1P04440 258 aa9.26□□□□□ -0.93
SMARCE1-214ENST00000578112 CSF1P09603 554 aa9.26□□□□□ -0.93
SMARCE1-214ENST00000578112 FUT4P22083 530 aa9.26□□□□□ -0.93
SMARCE1-214ENST00000578112 GSSP48637 474 aa9.26□□□□□ -0.93
SMARCE1-214ENST00000578112 SPATS1Q496A3 300 aa9.26□□□□□ -0.93
SMARCE1-214ENST00000578112 GCSAMQ8N6F7 178 aa9.26□□□□□ -0.93
SMARCE1-214ENST00000578112 BHLHE23Q8NDY6 225 aa9.26□□□□□ -0.93
SMARCE1-214ENST00000578112 CSNK2A3Q8NEV1 391 aa9.26□□□□□ -0.93
SMARCE1-214ENST00000578112 LHX4Q969G2 390 aa9.26□□□□□ -0.93
SMARCE1-214ENST00000578112 KCTD14Q9BQ13 255 aaPredicted RBP9.26□□□□□ -0.93
SMARCE1-214ENST00000578112 RERGLQ9H628 205 aa9.26□□□□□ -0.93
SMARCE1-214ENST00000578112 TENM1Q9UKZ4 2725 aa9.26□□□□□ -0.93
SMARCE1-214ENST00000578112 DOCK11Q5JSL3 2073 aa9.26□□□□□ -0.93
SMARCE1-214ENST00000578112 A0A0U1RQK1 487 aa9.26□□□□□ -0.93
SMARCE1-214ENST00000578112 TMEM210A6NLX4 147 aa9.26□□□□□ -0.93
SMARCE1-214ENST00000578112 DVL1O14640 695 aa9.26□□□□□ -0.93
SMARCE1-214ENST00000578112 ZNF205O95201 554 aa9.26□□□□□ -0.93
SMARCE1-214ENST00000578112 SFTPBP07988 381 aa9.26□□□□□ -0.93
SMARCE1-214ENST00000578112 COX4I1P13073 169 aa9.26□□□□□ -0.93
SMARCE1-214ENST00000578112 CA6P23280 308 aa9.26□□□□□ -0.93
SMARCE1-214ENST00000578112 PRDX6P30041 224 aa9.26□□□□□ -0.93
SMARCE1-214ENST00000578112 KRTAP10-3P60369 221 aa9.26□□□□□ -0.93
SMARCE1-214ENST00000578112 IL5RAQ01344 420 aa9.26□□□□□ -0.93
SMARCE1-214ENST00000578112 TSPAN31Q12999 210 aa9.26□□□□□ -0.93
SMARCE1-214ENST00000578112 MICBQ29980 383 aa9.26□□□□□ -0.93
SMARCE1-214ENST00000578112 FAM201AQ5SY85 155 aa9.26□□□□□ -0.93
SMARCE1-214ENST00000578112 ZDHHC21Q8IVQ6 265 aa9.26□□□□□ -0.93
SMARCE1-214ENST00000578112 FAM234AQ9H0X4 552 aa9.26□□□□□ -0.93
SMARCE1-214ENST00000578112 NKX6-3A6NJ46 265 aa9.25□□□□□ -0.93
SMARCE1-214ENST00000578112 DCTN6O00399 190 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms