RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 REPIN1Q9BWE0 567 aaKnown RBP20.7■□□□□ 0.9
ATPAF1-213ENST00000574428 OR2J1Q9GZK6 312 aa20.7■□□□□ 0.9
ATPAF1-213ENST00000574428 NGBQ9NPG2 151 aa20.7■□□□□ 0.9
ATPAF1-213ENST00000574428 MYO18BQ8IUG5 2567 aa20.7■□□□□ 0.9
ATPAF1-213ENST00000574428 TRAV8-7A0A075B6U6 113 aa20.69■□□□□ 0.9
ATPAF1-213ENST00000574428 SMIM30A4D0T7 59 aa20.69■□□□□ 0.9
ATPAF1-213ENST00000574428 CDRT1O95170 752 aa20.69■□□□□ 0.9
ATPAF1-213ENST00000574428 FAHP16930 419 aa20.69■□□□□ 0.9
ATPAF1-213ENST00000574428 ZNF12P17014 697 aa20.69■□□□□ 0.9
ATPAF1-213ENST00000574428 ZNF20P17024 532 aa20.69■□□□□ 0.9
ATPAF1-213ENST00000574428 PTAFRP25105 342 aa20.69■□□□□ 0.9
ATPAF1-213ENST00000574428 RAD52P43351 418 aa20.69■□□□□ 0.9
ATPAF1-213ENST00000574428 MXD1Q05195 221 aa20.69■□□□□ 0.9
ATPAF1-213ENST00000574428 TNK1Q13470 666 aa20.69■□□□□ 0.9
ATPAF1-213ENST00000574428 Q6ZSR3 168 aa20.69■□□□□ 0.9
ATPAF1-213ENST00000574428 PGAP1Q75T13 922 aa20.69■□□□□ 0.9
ATPAF1-213ENST00000574428 RADILQ96JH8 1075 aa20.69■□□□□ 0.9
ATPAF1-213ENST00000574428 NXF2Q9GZY0 626 aaKnown RBP20.69■□□□□ 0.9
ATPAF1-213ENST00000574428 AKIP1Q9NQ31 210 aa20.69■□□□□ 0.9
ATPAF1-213ENST00000574428 TAS2R4Q9NYW5 299 aa20.69■□□□□ 0.9
ATPAF1-213ENST00000574428 PIGLQ9Y2B2 252 aa20.69■□□□□ 0.9
ATPAF1-213ENST00000574428 LOC390937A0A1W2PQ73 354 aa20.69■□□□□ 0.9
ATPAF1-213ENST00000574428 RAF1P04049 648 aa20.69■□□□□ 0.9
ATPAF1-213ENST00000574428 CLEC2LP0C7M8 214 aa20.69■□□□□ 0.9
ATPAF1-213ENST00000574428 CFL1P23528 166 aaKnown RBP20.69■□□□□ 0.9
ATPAF1-213ENST00000574428 MYL9P24844 172 aa20.69■□□□□ 0.9
ATPAF1-213ENST00000574428 GNALP38405 381 aa20.69■□□□□ 0.9
ATPAF1-213ENST00000574428 PIAS4Q8N2W9 510 aaPredicted RBP20.69■□□□□ 0.9
ATPAF1-213ENST00000574428 SEMA6DQ8NFY4 1073 aa20.69■□□□□ 0.9
ATPAF1-213ENST00000574428 SLC25A40Q8TBP6 338 aa20.69■□□□□ 0.9
ATPAF1-213ENST00000574428 ABCD4O14678 606 aa20.68■□□□□ 0.9
ATPAF1-213ENST00000574428 SRMP19623 302 aa20.68■□□□□ 0.9
ATPAF1-213ENST00000574428 SNTB2Q13425 540 aaKnown RBP20.68■□□□□ 0.9
ATPAF1-213ENST00000574428 OR8B8Q15620 311 aa20.68■□□□□ 0.9
ATPAF1-213ENST00000574428 BORCS5Q969J3 196 aa20.68■□□□□ 0.9
ATPAF1-213ENST00000574428 BCL2L14Q9BZR8 327 aa20.68■□□□□ 0.9
ATPAF1-213ENST00000574428 MMP27Q9H306 513 aa20.68■□□□□ 0.9
ATPAF1-213ENST00000574428 A3GALT2U3KPV4 340 aa20.68■□□□□ 0.9
ATPAF1-213ENST00000574428 C19orf84I3L1E1 186 aa20.67■□□□□ 0.9
ATPAF1-213ENST00000574428 CASKO14936 926 aa20.67■□□□□ 0.9
ATPAF1-213ENST00000574428 RPS19P39019 145 aaKnown RBP20.67■□□□□ 0.9
ATPAF1-213ENST00000574428 UNQ6126/PRO20091Q6UXV3 157 aa20.67■□□□□ 0.9
ATPAF1-213ENST00000574428 PARP16Q8N5Y8 322 aa20.67■□□□□ 0.9
ATPAF1-213ENST00000574428 CCDC54Q8NEL0 328 aa20.67■□□□□ 0.9
ATPAF1-213ENST00000574428 TPK1Q9H3S4 243 aa20.67■□□□□ 0.9
ATPAF1-213ENST00000574428 SNTG1Q9NSN8 517 aa20.67■□□□□ 0.9
ATPAF1-213ENST00000574428 CLDN25C9JDP6 229 aa20.67■□□□□ 0.9
ATPAF1-213ENST00000574428 SOX6P35712 828 aa20.67■□□□□ 0.9
ATPAF1-213ENST00000574428 MAP2K3P46734 347 aa20.67■□□□□ 0.9
ATPAF1-213ENST00000574428 MTNR1BP49286 362 aa20.67■□□□□ 0.9
ATPAF1-213ENST00000574428 OR56B2PQ8NGI1 322 aa20.67■□□□□ 0.9
ATPAF1-213ENST00000574428 OPA3Q9H6K4 179 aa20.67■□□□□ 0.9
ATPAF1-213ENST00000574428 TCF7L1Q9HCS4 588 aa20.67■□□□□ 0.9
ATPAF1-213ENST00000574428 CKLFQ9UBR5 152 aa20.67■□□□□ 0.9
ATPAF1-213ENST00000574428 TRAV1-2A0A0B4J238 106 aa20.66■□□□□ 0.9
ATPAF1-213ENST00000574428 GGT3PA6NGU5 568 aa20.66■□□□□ 0.9
ATPAF1-213ENST00000574428 J3QRK9 145 aa20.66■□□□□ 0.9
ATPAF1-213ENST00000574428 NCR1O76036 304 aa20.66■□□□□ 0.9
ATPAF1-213ENST00000574428 BMP4P12644 408 aa20.66■□□□□ 0.9
ATPAF1-213ENST00000574428 RIPPLY1Q0D2K3 151 aa20.66■□□□□ 0.9
ATPAF1-213ENST00000574428 FBXW12Q6X9E4 464 aa20.66■□□□□ 0.9
ATPAF1-213ENST00000574428 SERPINA12Q8IW75 414 aa20.66■□□□□ 0.9
ATPAF1-213ENST00000574428 S100ZQ8WXG8 99 aa20.66■□□□□ 0.9
ATPAF1-213ENST00000574428 PLPPR2Q96GM1 343 aa20.66■□□□□ 0.9
ATPAF1-213ENST00000574428 MARS2Q96GW9 593 aaKnown RBP20.66■□□□□ 0.9
ATPAF1-213ENST00000574428 ESRP2Q9H6T0 727 aaKnown RBP20.66■□□□□ 0.9
ATPAF1-213ENST00000574428 FZR1Q9UM11 496 aa20.66■□□□□ 0.9
ATPAF1-213ENST00000574428 SPEF1Q9Y4P9 236 aa20.66■□□□□ 0.9
ATPAF1-213ENST00000574428 WIPF3A6NGB9 483 aa20.65■□□□□ 0.9
ATPAF1-213ENST00000574428 DHRS7CA6NNS2 312 aa20.65■□□□□ 0.9
ATPAF1-213ENST00000574428 MPV17P39210 176 aa20.65■□□□□ 0.9
ATPAF1-213ENST00000574428 CAV3P56539 151 aa20.65■□□□□ 0.9
ATPAF1-213ENST00000574428 NKX6-1P78426 367 aaPredicted RBP20.65■□□□□ 0.9
ATPAF1-213ENST00000574428 SRSF1Q07955 248 aaKnown RBP eCLIP20.65■□□□□ 0.9
ATPAF1-213ENST00000574428 ZNF846Q147U1 533 aa20.65■□□□□ 0.9
ATPAF1-213ENST00000574428 SLC22A25Q6T423 547 aa20.65■□□□□ 0.9
ATPAF1-213ENST00000574428 MFSD4AQ8N468 514 aa20.65■□□□□ 0.9
ATPAF1-213ENST00000574428 KLF14Q8TD94 323 aaPredicted RBP20.65■□□□□ 0.9
ATPAF1-213ENST00000574428 CMBLQ96DG6 245 aa20.65■□□□□ 0.9
ATPAF1-213ENST00000574428 C6orf62Q9GZU0 229 aaPredicted RBP20.65■□□□□ 0.9
ATPAF1-213ENST00000574428 HMG20AQ9NP66 347 aa20.65■□□□□ 0.9
ATPAF1-213ENST00000574428 HEATR1Q9H583 2144 aaKnown RBP20.65■□□□□ 0.9
ATPAF1-213ENST00000574428 SPTBN1Q01082 2364 aaKnown RBP20.65■□□□□ 0.9
ATPAF1-213ENST00000574428 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP20.64■□□□□ 0.9
ATPAF1-213ENST00000574428 IL1AP01583 271 aa20.64■□□□□ 0.9
ATPAF1-213ENST00000574428 MAS1P04201 325 aa20.64■□□□□ 0.9
ATPAF1-213ENST00000574428 IGFBP3P17936 291 aaPredicted RBP20.64■□□□□ 0.9
ATPAF1-213ENST00000574428 FSTP19883 344 aa20.64■□□□□ 0.9
ATPAF1-213ENST00000574428 OR10A3P58181 314 aa20.64■□□□□ 0.9
ATPAF1-213ENST00000574428 NCMAPQ5T1S8 102 aa20.64■□□□□ 0.9
ATPAF1-213ENST00000574428 OR2T2Q6IF00 324 aa20.64■□□□□ 0.9
ATPAF1-213ENST00000574428 ADAM5Q6NVV9 412 aa20.64■□□□□ 0.9
ATPAF1-213ENST00000574428 VHLLQ6RSH7 139 aa20.64■□□□□ 0.9
ATPAF1-213ENST00000574428 NR2C2APQ86WQ0 139 aa20.64■□□□□ 0.9
ATPAF1-213ENST00000574428 BHLHE23Q8NDY6 225 aa20.64■□□□□ 0.9
ATPAF1-213ENST00000574428 OR51A2Q8NGJ7 313 aa20.64■□□□□ 0.9
ATPAF1-213ENST00000574428 OR13C9Q8NGT0 318 aa20.64■□□□□ 0.9
ATPAF1-213ENST00000574428 SLC30A2Q9BRI3 323 aa20.64■□□□□ 0.9
ATPAF1-213ENST00000574428 BARHL1Q9BZE3 327 aa20.64■□□□□ 0.9
ATPAF1-213ENST00000574428 WDR12Q9GZL7 423 aaKnown RBP20.64■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms