RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 A0A0A6YYJ9 748 aa15.56■□□□□ 0.08
SNX1-208ENST00000559844 IGLV3-1P01715 115 aa15.56■□□□□ 0.08
SNX1-208ENST00000559844 PTHLHP12272 177 aa15.56■□□□□ 0.08
SNX1-208ENST00000559844 OTX1P32242 354 aaPredicted RBP15.56■□□□□ 0.08
SNX1-208ENST00000559844 CD83Q01151 205 aa15.56■□□□□ 0.08
SNX1-208ENST00000559844 ECH1Q13011 328 aa15.56■□□□□ 0.08
SNX1-208ENST00000559844 BIVMQ86UB2 503 aa15.56■□□□□ 0.08
SNX1-208ENST00000559844 OR52N4Q8NGI2 321 aa15.56■□□□□ 0.08
SNX1-208ENST00000559844 FBXO17Q96EF6 278 aa15.56■□□□□ 0.08
SNX1-208ENST00000559844 ZNF845Q96IR2 970 aaPredicted RBP15.56■□□□□ 0.08
SNX1-208ENST00000559844 FAM71F1Q96KD3 344 aaPredicted RBP15.56■□□□□ 0.08
SNX1-208ENST00000559844 CRLF2Q9HC73 371 aa15.56■□□□□ 0.08
SNX1-208ENST00000559844 PLSCR2Q9NRY7 297 aa15.56■□□□□ 0.08
SNX1-208ENST00000559844 EMC3Q9P0I2 261 aa15.56■□□□□ 0.08
SNX1-208ENST00000559844 SPRR3Q9UBC9 169 aa15.56■□□□□ 0.08
SNX1-208ENST00000559844 CACNA1CQ13936 2221 aa15.56■□□□□ 0.08
SNX1-208ENST00000559844 METTL21EPA6NDL7 271 aa15.56■□□□□ 0.08
SNX1-208ENST00000559844 F5H5K5 113 aa15.56■□□□□ 0.08
SNX1-208ENST00000559844 SCGNO76038 276 aa15.56■□□□□ 0.08
SNX1-208ENST00000559844 KDM4BO94953 1096 aa15.56■□□□□ 0.08
SNX1-208ENST00000559844 SYNGR4O95473 234 aa15.56■□□□□ 0.08
SNX1-208ENST00000559844 ZNF708P17019 499 aa15.56■□□□□ 0.08
SNX1-208ENST00000559844 PSMB1P20618 241 aaKnown RBP15.56■□□□□ 0.08
SNX1-208ENST00000559844 SLC6A9P48067 706 aa15.56■□□□□ 0.08
SNX1-208ENST00000559844 TDGF1P3P51864 188 aa15.56■□□□□ 0.08
SNX1-208ENST00000559844 CLDN18P56856 261 aa15.56■□□□□ 0.08
SNX1-208ENST00000559844 BCL2A1Q16548 175 aa15.56■□□□□ 0.08
SNX1-208ENST00000559844 KRTCAP3Q53RY4 240 aa15.56■□□□□ 0.08
SNX1-208ENST00000559844 RAB12Q6IQ22 244 aa15.56■□□□□ 0.08
SNX1-208ENST00000559844 OR14K1Q8NGZ2 314 aa15.56■□□□□ 0.08
SNX1-208ENST00000559844 ZNF486Q96H40 463 aaPredicted RBP15.56■□□□□ 0.08
SNX1-208ENST00000559844 C20orf85Q9H1P6 137 aa15.56■□□□□ 0.08
SNX1-208ENST00000559844 SCPEP1Q9HB40 452 aa15.56■□□□□ 0.08
SNX1-208ENST00000559844 POU2F3Q9UKI9 436 aa15.56■□□□□ 0.08
SNX1-208ENST00000559844 M0R135 149 aa15.55■□□□□ 0.08
SNX1-208ENST00000559844 ZNHIT1O43257 154 aa15.55■□□□□ 0.08
SNX1-208ENST00000559844 GMDSO60547 372 aa15.55■□□□□ 0.08
SNX1-208ENST00000559844 ALDOBP05062 364 aa15.55■□□□□ 0.08
SNX1-208ENST00000559844 ABOP16442 354 aa15.55■□□□□ 0.08
SNX1-208ENST00000559844 NTF4P34130 210 aa15.55■□□□□ 0.08
SNX1-208ENST00000559844 ZNF93P35789 620 aaPredicted RBP15.55■□□□□ 0.08
SNX1-208ENST00000559844 PCGF3Q3KNV8 242 aa15.55■□□□□ 0.08
SNX1-208ENST00000559844 SFRP4Q6FHJ7 346 aaPredicted RBP15.55■□□□□ 0.08
SNX1-208ENST00000559844 ZNF627Q7L945 461 aa15.55■□□□□ 0.08
SNX1-208ENST00000559844 ZNF837Q96EG3 531 aaPredicted RBP15.55■□□□□ 0.08
SNX1-208ENST00000559844 ZNF799Q96GE5 643 aa15.55■□□□□ 0.08
SNX1-208ENST00000559844 DMRTB1Q96MA1 342 aa15.55■□□□□ 0.08
SNX1-208ENST00000559844 NKX3-1Q99801 234 aaPredicted RBP15.55■□□□□ 0.08
SNX1-208ENST00000559844 FOXB1Q99853 325 aa15.55■□□□□ 0.08
SNX1-208ENST00000559844 MED28Q9H204 178 aa15.55■□□□□ 0.08
SNX1-208ENST00000559844 GHITMQ9H3K2 345 aa15.55■□□□□ 0.08
SNX1-208ENST00000559844 FBLN5Q9UBX5 448 aa15.55■□□□□ 0.08
SNX1-208ENST00000559844 RP1L1Q8IWN7 2480 aaPredicted RBP15.55■□□□□ 0.08
SNX1-208ENST00000559844 PHF3Q92576 2039 aaKnown RBP15.55■□□□□ 0.08
SNX1-208ENST00000559844 AQP7O14520 342 aa15.55■□□□□ 0.08
SNX1-208ENST00000559844 SGCEO43556 437 aa15.55■□□□□ 0.08
SNX1-208ENST00000559844 PRAF2O60831 178 aa15.55■□□□□ 0.08
SNX1-208ENST00000559844 ACTL6AO96019 429 aa15.55■□□□□ 0.08
SNX1-208ENST00000559844 PRB1P04280 392 aa15.55■□□□□ 0.08
SNX1-208ENST00000559844 NKX2-5P52952 324 aaPredicted RBP15.55■□□□□ 0.08
SNX1-208ENST00000559844 ACTBP60709 375 aa15.55■□□□□ 0.08
SNX1-208ENST00000559844 PCBD1P61457 104 aa15.55■□□□□ 0.08
SNX1-208ENST00000559844 ACTG1P63261 375 aa15.55■□□□□ 0.08
SNX1-208ENST00000559844 GFOD2Q3B7J2 385 aa15.55■□□□□ 0.08
SNX1-208ENST00000559844 DRAM2Q6UX65 266 aa15.55■□□□□ 0.08
SNX1-208ENST00000559844 Q6ZSR3 168 aa15.55■□□□□ 0.08
SNX1-208ENST00000559844 ABHD3Q8WU67 409 aa15.55■□□□□ 0.08
SNX1-208ENST00000559844 FAM46BQ96A09 425 aa15.55■□□□□ 0.08
SNX1-208ENST00000559844 LINC00470Q9BZP3 86 aa15.55■□□□□ 0.08
SNX1-208ENST00000559844 SLCO5A1Q9H2Y9 848 aa15.55■□□□□ 0.08
SNX1-208ENST00000559844 GPR35Q9HC97 309 aa15.55■□□□□ 0.08
SNX1-208ENST00000559844 MCUBQ9NWR8 336 aa15.55■□□□□ 0.08
SNX1-208ENST00000559844 PARPBPQ9NWS1 579 aa15.55■□□□□ 0.08
SNX1-208ENST00000559844 MCTS1Q9ULC4 181 aaKnown RBP15.55■□□□□ 0.08
SNX1-208ENST00000559844 NOSIPQ9Y314 301 aaKnown RBP15.55■□□□□ 0.08
SNX1-208ENST00000559844 FAM208BQ5VWN6 2430 aa15.54■□□□□ 0.08
SNX1-208ENST00000559844 YES1P07947 543 aa15.54■□□□□ 0.08
SNX1-208ENST00000559844 STOMP27105 288 aa15.54■□□□□ 0.08
SNX1-208ENST00000559844 THBS4P35443 961 aa15.54■□□□□ 0.08
SNX1-208ENST00000559844 PMPCAQ10713 525 aa15.54■□□□□ 0.08
SNX1-208ENST00000559844 MAB21L1Q13394 359 aa15.54■□□□□ 0.08
SNX1-208ENST00000559844 STK11Q15831 433 aa15.54■□□□□ 0.08
SNX1-208ENST00000559844 GSG1Q2KHT4 349 aa15.54■□□□□ 0.08
SNX1-208ENST00000559844 NRN1LQ496H8 165 aa15.54■□□□□ 0.08
SNX1-208ENST00000559844 GPX8Q8TED1 209 aa15.54■□□□□ 0.08
SNX1-208ENST00000559844 C10orf35Q96D05 121 aa15.54■□□□□ 0.08
SNX1-208ENST00000559844 ALKBH3Q96Q83 286 aaPredicted RBP15.54■□□□□ 0.08
SNX1-208ENST00000559844 FYTTD1Q96QD9 318 aaKnown RBP15.54■□□□□ 0.08
SNX1-208ENST00000559844 OR10A2Q9H208 303 aa15.54■□□□□ 0.08
SNX1-208ENST00000559844 V9GYS6 101 aa15.54■□□□□ 0.08
SNX1-208ENST00000559844 SMG1Q96Q15 3661 aaKnown RBP15.53■□□□□ 0.08
SNX1-208ENST00000559844 PEX14O75381 377 aa15.53■□□□□ 0.08
SNX1-208ENST00000559844 MRPL33O75394 65 aaKnown RBP15.53■□□□□ 0.08
SNX1-208ENST00000559844 MTRF1O75570 445 aaKnown RBP15.53■□□□□ 0.08
SNX1-208ENST00000559844 DHRS3O75911 302 aa15.53■□□□□ 0.08
SNX1-208ENST00000559844 LPLP06858 475 aa15.53■□□□□ 0.08
SNX1-208ENST00000559844 SRYQ05066 204 aa15.53■□□□□ 0.08
SNX1-208ENST00000559844 CEACAM16Q2WEN9 425 aa15.53■□□□□ 0.08
SNX1-208ENST00000559844 CD276Q5ZPR3 534 aa15.53■□□□□ 0.08
SNX1-208ENST00000559844 AWAT2Q6E213 333 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms